RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 KRTAP9-4Q9BYQ2 154 aa4.28□□□□□ -1.72
PSEN1-221ENST00000557293 ATP5EP56381 51 aaPredicted RBP4.24□□□□□ -1.73
PSEN1-221ENST00000557293 KRTAP4-7Q9BYR0 210 aa4.22□□□□□ -1.73
PSEN1-221ENST00000557293 RPS28P62857 69 aaKnown RBP4.21□□□□□ -1.74
PSEN1-221ENST00000557293 KRTAP5-5Q701N2 237 aaPredicted RBP4.21□□□□□ -1.74
PSEN1-221ENST00000557293 ACYP2P14621 99 aa4.19□□□□□ -1.74
PSEN1-221ENST00000557293 SERP1Q9Y6X1 66 aa4.19□□□□□ -1.74
PSEN1-221ENST00000557293 SPTSSBQ8NFR3 76 aa4.18□□□□□ -1.74
PSEN1-221ENST00000557293 KRTAP23-1A1A580 65 aa4.16□□□□□ -1.74
PSEN1-221ENST00000557293 C10orf95Q9H7T3 257 aa4.16□□□□□ -1.74
PSEN1-221ENST00000557293 COA5Q86WW8 74 aa4.14□□□□□ -1.75
PSEN1-221ENST00000557293 KRTAP12-4P60329 112 aa4.13□□□□□ -1.75
PSEN1-221ENST00000557293 LCE3AQ5TA76 89 aa4.12□□□□□ -1.75
PSEN1-221ENST00000557293 SYNE1Q8NF91 8797 aaKnown RBP4.1□□□□□ -1.75
PSEN1-221ENST00000557293 KRTAP4-11Q9BYQ6 195 aa4.09□□□□□ -1.75
PSEN1-221ENST00000557293 AHNAKQ09666 5890 aaKnown RBP4.05□□□□□ -1.76
PSEN1-221ENST00000557293 SMIM26A0A096LP01 95 aa4.05□□□□□ -1.76
PSEN1-221ENST00000557293 CHKB-CPT1BH3BT56 60 aa4.05□□□□□ -1.76
PSEN1-221ENST00000557293 Q1T7F1 81 aa4.04□□□□□ -1.76
PSEN1-221ENST00000557293 KRTAP12-1P59990 96 aa4.03□□□□□ -1.76
PSEN1-221ENST00000557293 SPINT4Q6UDR6 99 aa4.03□□□□□ -1.76
PSEN1-221ENST00000557293 MUC5ACP98088 5654 aa4.03□□□□□ -1.76
PSEN1-221ENST00000557293 LINC01558Q9Y6Z2 57 aa4.02□□□□□ -1.77
PSEN1-221ENST00000557293 KRTAP5-8O75690 187 aa4□□□□□ -1.77
PSEN1-221ENST00000557293 SPATA8Q6RVD6 105 aa4□□□□□ -1.77
PSEN1-221ENST00000557293 MUC5BQ9HC84 5762 aaPredicted RBP3.97□□□□□ -1.77
PSEN1-221ENST00000557293 KRTAP5-2Q701N4 177 aa3.95□□□□□ -1.78
PSEN1-221ENST00000557293 KRTAP12-3P60328 96 aa3.93□□□□□ -1.78
PSEN1-221ENST00000557293 V9GYY9 64 aa3.92□□□□□ -1.78
PSEN1-221ENST00000557293 TNP1P09430 55 aa3.9□□□□□ -1.79
PSEN1-221ENST00000557293 PSPHP1O15172 72 aa3.88□□□□□ -1.79
PSEN1-221ENST00000557293 PRR15LQ9BU68 103 aa3.88□□□□□ -1.79
PSEN1-221ENST00000557293 A0A1B0GU33 70 aa3.84□□□□□ -1.79
PSEN1-221ENST00000557293 A0A1B0GU69 56 aa3.84□□□□□ -1.79
PSEN1-221ENST00000557293 A8MU10 97 aa3.82□□□□□ -1.8
PSEN1-221ENST00000557293 KRTAP15-1Q3LI76 137 aa3.82□□□□□ -1.8
PSEN1-221ENST00000557293 KRTAP4-2Q9BYR5 136 aa3.82□□□□□ -1.8
PSEN1-221ENST00000557293 SEC61GP60059 68 aa3.77□□□□□ -1.81
PSEN1-221ENST00000557293 KRTAP6-1Q3LI64 71 aa3.77□□□□□ -1.81
PSEN1-221ENST00000557293 OBSCNQ5VST9 7968 aa3.76□□□□□ -1.81
PSEN1-221ENST00000557293 UQCR11O14957 56 aa3.74□□□□□ -1.81
PSEN1-221ENST00000557293 MT1AP04731 61 aa3.74□□□□□ -1.81
PSEN1-221ENST00000557293 SVIPQ8NHG7 77 aa3.74□□□□□ -1.81
PSEN1-221ENST00000557293 CDC42SE1Q9NRR8 79 aa3.74□□□□□ -1.81
PSEN1-221ENST00000557293 A6NED7 52 aa3.72□□□□□ -1.81
PSEN1-221ENST00000557293 MIR22HGQ0VDD5 57 aa3.7□□□□□ -1.82
PSEN1-221ENST00000557293 KRTAP6-2Q3LI66 62 aa3.68□□□□□ -1.82
PSEN1-221ENST00000557293 BRK1Q8WUW1 75 aa3.67□□□□□ -1.82
PSEN1-221ENST00000557293 KRTAP5-1Q6L8H4 278 aa3.65□□□□□ -1.83
PSEN1-221ENST00000557293 PRO0628Q9UI54 55 aa3.64□□□□□ -1.83
PSEN1-221ENST00000557293 LCE3CQ5T5A8 94 aa3.59□□□□□ -1.83
PSEN1-221ENST00000557293 KRTAP25-1Q3LHN0 102 aa3.52□□□□□ -1.85
PSEN1-221ENST00000557293 KRTAP9-6A8MVA2 160 aa3.48□□□□□ -1.85
PSEN1-221ENST00000557293 PMAIP1Q13794 54 aa3.46□□□□□ -1.86
PSEN1-221ENST00000557293 MT3P25713 68 aa3.42□□□□□ -1.86
PSEN1-221ENST00000557293 A0A0A0MQY5 61 aa3.41□□□□□ -1.86
PSEN1-221ENST00000557293 K7ERS5 55 aa3.41□□□□□ -1.86
PSEN1-221ENST00000557293 ROMO1P60602 79 aa3.4□□□□□ -1.87
PSEN1-221ENST00000557293 KTN1-AS1Q86SY8 53 aa3.37□□□□□ -1.87
PSEN1-221ENST00000557293 PRAC1Q96KF2 57 aa3.32□□□□□ -1.88
PSEN1-221ENST00000557293 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
PSEN1-221ENST00000557293 LCE1BQ5T7P3 118 aa3.1□□□□□ -1.91
PSEN1-221ENST00000557293 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
PSEN1-221ENST00000557293 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.95
PSEN1-221ENST00000557293 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
PSEN1-221ENST00000557293 NDUFAF8A1L188 74 aa2.8□□□□□ -1.96
PSEN1-221ENST00000557293 PHGR1C9JFL3 82 aa2.78□□□□□ -1.96
PSEN1-221ENST00000557293 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.72□□□□□ -1.97
PSEN1-221ENST00000557293 LUZP6Q538Z0 58 aa2.54□□□□□ -2
PSEN1-221ENST00000557293 KRTAP21-2Q3LI59 83 aa2.51□□□□□ -2.01
PSEN1-221ENST00000557293 LCE3DQ9BYE3 92 aa2.46□□□□□ -2.02
PSEN1-221ENST00000557293 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
PSEN1-221ENST00000557293 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
PSEN1-221ENST00000557293 LCE3EQ5T5B0 92 aa2.29□□□□□ -2.04
PSEN1-221ENST00000557293 INE1O15225 51 aa2.12□□□□□ -2.07
PSEN1-221ENST00000557293 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
PSEN1-221ENST00000557293 PRM1P04553 51 aa1.78□□□□□ -2.12
PSEN1-221ENST00000557293 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 90.2 ms