RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 MT1LQ93083 61 aa7.88□□□□□ -1.15
RCCD1-208ENST00000557266 KRTAP19-4Q3LI73 84 aa7.82□□□□□ -1.16
RCCD1-208ENST00000557266 MACF1Q9UPN3 7388 aaKnown RBP7.7□□□□□ -1.18
RCCD1-208ENST00000557266 KRTAP2-3P0C7H8 128 aa7.64□□□□□ -1.19
RCCD1-208ENST00000557266 KRTAP2-4Q9BYR9 128 aa7.64□□□□□ -1.19
RCCD1-208ENST00000557266 KRTAP2-1Q9BYU5 128 aa7.64□□□□□ -1.19
RCCD1-208ENST00000557266 KRTAP9-6A0A140TA67 174 aa7.63□□□□□ -1.19
RCCD1-208ENST00000557266 KRTAP4-3Q9BYR4 195 aa7.45□□□□□ -1.22
RCCD1-208ENST00000557266 SYNE2Q8WXH0 6885 aaKnown RBP7.45□□□□□ -1.22
RCCD1-208ENST00000557266 MUC12Q9UKN1 5478 aa7.45□□□□□ -1.22
RCCD1-208ENST00000557266 SPRR2FQ96RM1 72 aa7.4□□□□□ -1.22
RCCD1-208ENST00000557266 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.4□□□□□ -1.23
RCCD1-208ENST00000557266 KRTAP19-3Q7Z4W3 81 aa7.4□□□□□ -1.23
RCCD1-208ENST00000557266 LOC100996750A0A140TA64 210 aa7.39□□□□□ -1.23
RCCD1-208ENST00000557266 MT1MQ8N339 61 aa7.39□□□□□ -1.23
RCCD1-208ENST00000557266 MT1GP13640 62 aa7.35□□□□□ -1.23
RCCD1-208ENST00000557266 KRTAP5-9P26371 169 aa7.35□□□□□ -1.23
RCCD1-208ENST00000557266 KRTAP6-3Q3LI67 103 aa7.21□□□□□ -1.26
RCCD1-208ENST00000557266 LCE5AQ5TCM9 118 aa7.18□□□□□ -1.26
RCCD1-208ENST00000557266 MDN1Q9NU22 5596 aa7.13□□□□□ -1.27
RCCD1-208ENST00000557266 LCE1AQ5T7P2 110 aa7.09□□□□□ -1.28
RCCD1-208ENST00000557266 DSTQ03001 7570 aaKnown RBP7.03□□□□□ -1.28
RCCD1-208ENST00000557266 SPRR2EP22531 72 aa7.03□□□□□ -1.28
RCCD1-208ENST00000557266 SPRR2BP35325 72 aa7.03□□□□□ -1.28
RCCD1-208ENST00000557266 SPRR2AP35326 72 aa7.03□□□□□ -1.28
RCCD1-208ENST00000557266 KRTAP9-7A8MTY7 169 aa7□□□□□ -1.29
RCCD1-208ENST00000557266 SPRR2DP22532 72 aa6.77□□□□□ -1.33
RCCD1-208ENST00000557266 LCE3BQ5TA77 95 aa6.74□□□□□ -1.33
RCCD1-208ENST00000557266 NEBP20929 6669 aa6.72□□□□□ -1.33
RCCD1-208ENST00000557266 KRTAP12-4P60329 112 aa6.69□□□□□ -1.34
RCCD1-208ENST00000557266 KRTAP6-1Q3LI64 71 aa6.68□□□□□ -1.34
RCCD1-208ENST00000557266 MT1AP04731 61 aa6.62□□□□□ -1.35
RCCD1-208ENST00000557266 KRTAP4-9Q9BYQ8 210 aa6.58□□□□□ -1.36
RCCD1-208ENST00000557266 KRTAP5-5Q701N2 237 aaPredicted RBP6.56□□□□□ -1.36
RCCD1-208ENST00000557266 SYNE1Q8NF91 8797 aaKnown RBP6.42□□□□□ -1.38
RCCD1-208ENST00000557266 LCE3DQ9BYE3 92 aa6.32□□□□□ -1.4
RCCD1-208ENST00000557266 LCE3EQ5T5B0 92 aa6.23□□□□□ -1.41
RCCD1-208ENST00000557266 KRTAP9-4Q9BYQ2 154 aa6.23□□□□□ -1.41
RCCD1-208ENST00000557266 KRTAP20-1Q3LI63 56 aa6.19□□□□□ -1.42
RCCD1-208ENST00000557266 KRTAP2-2Q9BYT5 123 aa6.17□□□□□ -1.42
RCCD1-208ENST00000557266 KRTAP5-4Q6L8H1 288 aa6.13□□□□□ -1.43
RCCD1-208ENST00000557266 LCE4AQ5TA78 99 aa6.01□□□□□ -1.45
RCCD1-208ENST00000557266 KRTAP6-2Q3LI66 62 aa6□□□□□ -1.45
RCCD1-208ENST00000557266 MT3P25713 68 aa5.93□□□□□ -1.46
RCCD1-208ENST00000557266 PRM1P04553 51 aa5.9□□□□□ -1.46
RCCD1-208ENST00000557266 MT4P47944 62 aa5.87□□□□□ -1.47
RCCD1-208ENST00000557266 KRTAP4-6Q9BYQ5 205 aa5.84□□□□□ -1.47
RCCD1-208ENST00000557266 LCE1DQ5T752 114 aa5.79□□□□□ -1.48
RCCD1-208ENST00000557266 HMCN1Q96RW7 5635 aa5.73□□□□□ -1.49
RCCD1-208ENST00000557266 KRTAP20-2Q3LI61 65 aa5.73□□□□□ -1.49
RCCD1-208ENST00000557266 OBSCNQ5VST9 7968 aa5.72□□□□□ -1.49
RCCD1-208ENST00000557266 KRTAP5-2Q701N4 177 aa5.56□□□□□ -1.52
RCCD1-208ENST00000557266 KRTAP5-3Q6L8H2 238 aa5.53□□□□□ -1.52
RCCD1-208ENST00000557266 AHNAK2Q8IVF2 5795 aa5.05□□□□□ -1.6
RCCD1-208ENST00000557266 MUC5ACP98088 5654 aa5.04□□□□□ -1.6
RCCD1-208ENST00000557266 KRTAP4-11Q9BYQ6 195 aa4.97□□□□□ -1.61
RCCD1-208ENST00000557266 LCE1EQ5T753 118 aa4.94□□□□□ -1.62
RCCD1-208ENST00000557266 KRTAP5-10Q6L8G5 202 aa4.82□□□□□ -1.64
RCCD1-208ENST00000557266 KRTAP5-1Q6L8H4 278 aa4.82□□□□□ -1.64
RCCD1-208ENST00000557266 KRTAP5-8O75690 187 aa4.79□□□□□ -1.64
RCCD1-208ENST00000557266 LCE1BQ5T7P3 118 aa4.79□□□□□ -1.64
RCCD1-208ENST00000557266 KRTAP4-2Q9BYR5 136 aa4.66□□□□□ -1.66
RCCD1-208ENST00000557266 KRTAP5-7Q6L8G8 165 aa4.64□□□□□ -1.67
RCCD1-208ENST00000557266 LCE1CQ5T751 118 aa4.63□□□□□ -1.67
RCCD1-208ENST00000557266 GPR98Q8WXG9 6306 aa4.54□□□□□ -1.68
RCCD1-208ENST00000557266 KRTAP4-12Q9BQ66 201 aa4.51□□□□□ -1.69
RCCD1-208ENST00000557266 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.37□□□□□ -1.71
RCCD1-208ENST00000557266 KRTAP21-2Q3LI59 83 aa4.33□□□□□ -1.72
RCCD1-208ENST00000557266 KRTAP9-9Q9BYP9 154 aa4.31□□□□□ -1.72
RCCD1-208ENST00000557266 MUC5BQ9HC84 5762 aaPredicted RBP4.11□□□□□ -1.75
RCCD1-208ENST00000557266 KRTAP5-11Q6L8G4 156 aa4.07□□□□□ -1.76
RCCD1-208ENST00000557266 KRTAP4-4Q9BYR3 166 aa3.92□□□□□ -1.78
RCCD1-208ENST00000557266 AHNAKQ09666 5890 aaKnown RBP3.75□□□□□ -1.81
RCCD1-208ENST00000557266 KRTAP21-1Q3LI58 79 aa3.71□□□□□ -1.81
RCCD1-208ENST00000557266 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
RCCD1-208ENST00000557266 MUC19Q7Z5P9 8384 aa3.57□□□□□ -1.84
RCCD1-208ENST00000557266 PHGR1C9JFL3 82 aa3.5□□□□□ -1.85
RCCD1-208ENST00000557266 MUC16Q8WXI7 14507 aa2.28□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 10.7 ms