RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 KRTAP5-4Q6L8H1 288 aa5.51□□□□□ -1.53
TUBB3-213ENST00000557262 KRTAP4-6Q9BYQ5 205 aa5.44□□□□□ -1.54
TUBB3-213ENST00000557262 KRTAP5-10Q6L8G5 202 aa5.4□□□□□ -1.54
TUBB3-213ENST00000557262 KRTAP4-7Q9BYR0 210 aa5.35□□□□□ -1.55
TUBB3-213ENST00000557262 KRTAP12-3P60328 96 aa5.34□□□□□ -1.55
TUBB3-213ENST00000557262 PRR15LQ9BU68 103 aa5.33□□□□□ -1.56
TUBB3-213ENST00000557262 ANAPC13Q9BS18 74 aa5.28□□□□□ -1.56
TUBB3-213ENST00000557262 KRTAP5-7Q6L8G8 165 aa5.23□□□□□ -1.57
TUBB3-213ENST00000557262 KRTAP5-3Q6L8H2 238 aa5.23□□□□□ -1.57
TUBB3-213ENST00000557262 LINC01558Q9Y6Z2 57 aa5.23□□□□□ -1.57
TUBB3-213ENST00000557262 KRTAP20-2Q3LI61 65 aa5.21□□□□□ -1.58
TUBB3-213ENST00000557262 KRTAP5-5Q701N2 237 aaPredicted RBP5.2□□□□□ -1.58
TUBB3-213ENST00000557262 ATP5EP56381 51 aaPredicted RBP5.19□□□□□ -1.58
TUBB3-213ENST00000557262 SPRR5A0A1B0GTR4 108 aa5.18□□□□□ -1.58
TUBB3-213ENST00000557262 CCDC179H3BU77 68 aa5.18□□□□□ -1.58
TUBB3-213ENST00000557262 UQCR11O14957 56 aa5.15□□□□□ -1.59
TUBB3-213ENST00000557262 KRTAP12-4P60329 112 aa5.14□□□□□ -1.59
TUBB3-213ENST00000557262 KRTAP25-1Q3LHN0 102 aa5.11□□□□□ -1.59
TUBB3-213ENST00000557262 LOC100996750A0A140TA64 210 aa5.08□□□□□ -1.6
TUBB3-213ENST00000557262 KRTAP19-4Q3LI73 84 aa5.07□□□□□ -1.6
TUBB3-213ENST00000557262 SYNE1Q8NF91 8797 aaKnown RBP5.02□□□□□ -1.61
TUBB3-213ENST00000557262 MIR22HGQ0VDD5 57 aa5.01□□□□□ -1.61
TUBB3-213ENST00000557262 K7ERS5 55 aa4.97□□□□□ -1.61
TUBB3-213ENST00000557262 TMEM258P61165 79 aa4.97□□□□□ -1.61
TUBB3-213ENST00000557262 KRTAP15-1Q3LI76 137 aa4.93□□□□□ -1.62
TUBB3-213ENST00000557262 KRTAP23-1A1A580 65 aa4.92□□□□□ -1.62
TUBB3-213ENST00000557262 LCE3CQ5T5A8 94 aa4.9□□□□□ -1.63
TUBB3-213ENST00000557262 KRTAP4-11Q9BYQ6 195 aa4.82□□□□□ -1.64
TUBB3-213ENST00000557262 PSPHP1O15172 72 aa4.79□□□□□ -1.64
TUBB3-213ENST00000557262 MT1AP04731 61 aa4.79□□□□□ -1.64
TUBB3-213ENST00000557262 KRTAP5-2Q701N4 177 aa4.79□□□□□ -1.64
TUBB3-213ENST00000557262 V9GYY9 64 aa4.78□□□□□ -1.64
TUBB3-213ENST00000557262 KRTAP6-1Q3LI64 71 aa4.77□□□□□ -1.65
TUBB3-213ENST00000557262 Q1T7F1 81 aa4.73□□□□□ -1.65
TUBB3-213ENST00000557262 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
TUBB3-213ENST00000557262 CDC42SE1Q9NRR8 79 aa4.66□□□□□ -1.66
TUBB3-213ENST00000557262 KRTAP5-8O75690 187 aa4.65□□□□□ -1.67
TUBB3-213ENST00000557262 RPS28P62857 69 aaKnown RBP4.62□□□□□ -1.67
TUBB3-213ENST00000557262 A6NED7 52 aa4.61□□□□□ -1.67
TUBB3-213ENST00000557262 KRTAP9-6A8MVA2 160 aa4.61□□□□□ -1.67
TUBB3-213ENST00000557262 KRTAP6-2Q3LI66 62 aa4.6□□□□□ -1.67
TUBB3-213ENST00000557262 PCP4P48539 62 aa4.59□□□□□ -1.67
TUBB3-213ENST00000557262 AHNAKQ09666 5890 aaKnown RBP4.58□□□□□ -1.68
TUBB3-213ENST00000557262 ROMO1P60602 79 aa4.58□□□□□ -1.68
TUBB3-213ENST00000557262 MUC5BQ9HC84 5762 aaPredicted RBP4.55□□□□□ -1.68
TUBB3-213ENST00000557262 MUC5ACP98088 5654 aa4.55□□□□□ -1.68
TUBB3-213ENST00000557262 OBSCNQ5VST9 7968 aa4.51□□□□□ -1.69
TUBB3-213ENST00000557262 KRTAP9-9Q9BYP9 154 aa4.46□□□□□ -1.7
TUBB3-213ENST00000557262 MT3P25713 68 aa4.41□□□□□ -1.7
TUBB3-213ENST00000557262 KRTAP5-1Q6L8H4 278 aa4.33□□□□□ -1.72
TUBB3-213ENST00000557262 SVIPQ8NHG7 77 aa4.18□□□□□ -1.74
TUBB3-213ENST00000557262 LCE1EQ5T753 118 aa4.1□□□□□ -1.75
TUBB3-213ENST00000557262 KRTAP4-2Q9BYR5 136 aa3.87□□□□□ -1.79
TUBB3-213ENST00000557262 LCE1BQ5T7P3 118 aa3.86□□□□□ -1.79
TUBB3-213ENST00000557262 LCE1CQ5T751 118 aa3.8□□□□□ -1.8
TUBB3-213ENST00000557262 PRO0628Q9UI54 55 aa3.75□□□□□ -1.81
TUBB3-213ENST00000557262 BRK1Q8WUW1 75 aa3.74□□□□□ -1.81
TUBB3-213ENST00000557262 KRTAP4-12Q9BQ66 201 aa3.59□□□□□ -1.83
TUBB3-213ENST00000557262 PMAIP1Q13794 54 aa3.56□□□□□ -1.84
TUBB3-213ENST00000557262 LCE3DQ9BYE3 92 aa3.5□□□□□ -1.85
TUBB3-213ENST00000557262 KTN1-AS1Q86SY8 53 aa3.46□□□□□ -1.86
TUBB3-213ENST00000557262 KRTAP5-11Q6L8G4 156 aa3.44□□□□□ -1.86
TUBB3-213ENST00000557262 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
TUBB3-213ENST00000557262 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.42□□□□□ -1.86
TUBB3-213ENST00000557262 PRAC1Q96KF2 57 aa3.38□□□□□ -1.87
TUBB3-213ENST00000557262 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
TUBB3-213ENST00000557262 PHGR1C9JFL3 82 aa3.16□□□□□ -1.9
TUBB3-213ENST00000557262 KRTAP21-2Q3LI59 83 aa3.15□□□□□ -1.91
TUBB3-213ENST00000557262 LUZP6Q538Z0 58 aa2.93□□□□□ -1.94
TUBB3-213ENST00000557262 KRTAP4-4Q9BYR3 166 aa2.91□□□□□ -1.94
TUBB3-213ENST00000557262 H3BS24 57 aa2.87□□□□□ -1.95
TUBB3-213ENST00000557262 A0A0A0MQY5 61 aa2.81□□□□□ -1.96
TUBB3-213ENST00000557262 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
TUBB3-213ENST00000557262 NDUFAF8A1L188 74 aa2.64□□□□□ -1.99
TUBB3-213ENST00000557262 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.03
TUBB3-213ENST00000557262 PRM1P04553 51 aa2.32□□□□□ -2.04
TUBB3-213ENST00000557262 INE1O15225 51 aa2.3□□□□□ -2.04
TUBB3-213ENST00000557262 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 106.1 ms