RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 HMCN1Q96RW7 5635 aa8.01□□□□□ -1.13
TMEM260-214ENST00000556975 MT4P47944 62 aa7.92□□□□□ -1.14
TMEM260-214ENST00000556975 AHNAK2Q8IVF2 5795 aa7.9□□□□□ -1.14
TMEM260-214ENST00000556975 LCE4AQ5TA78 99 aa7.89□□□□□ -1.15
TMEM260-214ENST00000556975 UQCR11O14957 56 aa7.83□□□□□ -1.16
TMEM260-214ENST00000556975 TMEM258P61165 79 aa7.83□□□□□ -1.16
TMEM260-214ENST00000556975 KRTAP4-3Q9BYR4 195 aa7.83□□□□□ -1.16
TMEM260-214ENST00000556975 KRTAP12-3P60328 96 aa7.75□□□□□ -1.17
TMEM260-214ENST00000556975 KRTAP5-4Q6L8H1 288 aa7.75□□□□□ -1.17
TMEM260-214ENST00000556975 KRTAP4-7Q9BYR0 210 aa7.64□□□□□ -1.19
TMEM260-214ENST00000556975 MIR22HGQ0VDD5 57 aa7.62□□□□□ -1.19
TMEM260-214ENST00000556975 KRTAP5-10Q6L8G5 202 aa7.62□□□□□ -1.19
TMEM260-214ENST00000556975 KRTAP4-6Q9BYQ5 205 aa7.61□□□□□ -1.19
TMEM260-214ENST00000556975 KRTAP25-1Q3LHN0 102 aa7.59□□□□□ -1.19
TMEM260-214ENST00000556975 K7ERS5 55 aa7.5□□□□□ -1.21
TMEM260-214ENST00000556975 V9GYY9 64 aa7.46□□□□□ -1.22
TMEM260-214ENST00000556975 Q1T7F1 81 aa7.41□□□□□ -1.22
TMEM260-214ENST00000556975 KRTAP5-5Q701N2 237 aaPredicted RBP7.41□□□□□ -1.22
TMEM260-214ENST00000556975 PSPHP1O15172 72 aa7.4□□□□□ -1.22
TMEM260-214ENST00000556975 KRTAP19-4Q3LI73 84 aa7.4□□□□□ -1.22
TMEM260-214ENST00000556975 KRTAP5-7Q6L8G8 165 aa7.38□□□□□ -1.23
TMEM260-214ENST00000556975 KRTAP5-3Q6L8H2 238 aa7.37□□□□□ -1.23
TMEM260-214ENST00000556975 KRTAP23-1A1A580 65 aa7.36□□□□□ -1.23
TMEM260-214ENST00000556975 KRTAP20-2Q3LI61 65 aa7.29□□□□□ -1.24
TMEM260-214ENST00000556975 SPRR5A0A1B0GTR4 108 aa7.28□□□□□ -1.24
TMEM260-214ENST00000556975 LOC100996750A0A140TA64 210 aa7.24□□□□□ -1.25
TMEM260-214ENST00000556975 KRTAP15-1Q3LI76 137 aa7.23□□□□□ -1.25
TMEM260-214ENST00000556975 KRTAP12-4P60329 112 aa7.22□□□□□ -1.25
TMEM260-214ENST00000556975 SYNE1Q8NF91 8797 aaKnown RBP7.17□□□□□ -1.26
TMEM260-214ENST00000556975 A6NED7 52 aa7.15□□□□□ -1.26
TMEM260-214ENST00000556975 LCE3CQ5T5A8 94 aa7.14□□□□□ -1.27
TMEM260-214ENST00000556975 CDC42SE1Q9NRR8 79 aa7.08□□□□□ -1.28
TMEM260-214ENST00000556975 ROMO1P60602 79 aa6.97□□□□□ -1.29
TMEM260-214ENST00000556975 RPS28P62857 69 aaKnown RBP6.94□□□□□ -1.3
TMEM260-214ENST00000556975 MT1AP04731 61 aa6.87□□□□□ -1.31
TMEM260-214ENST00000556975 KRTAP6-1Q3LI64 71 aa6.82□□□□□ -1.32
TMEM260-214ENST00000556975 KRTAP5-2Q701N4 177 aa6.78□□□□□ -1.32
TMEM260-214ENST00000556975 KRTAP9-6A8MVA2 160 aa6.74□□□□□ -1.33
TMEM260-214ENST00000556975 KRTAP4-11Q9BYQ6 195 aa6.73□□□□□ -1.33
TMEM260-214ENST00000556975 AHNAKQ09666 5890 aaKnown RBP6.68□□□□□ -1.34
TMEM260-214ENST00000556975 KRTAP9-4Q9BYQ2 154 aa6.66□□□□□ -1.34
TMEM260-214ENST00000556975 PCP4P48539 62 aa6.64□□□□□ -1.35
TMEM260-214ENST00000556975 MUC5ACP98088 5654 aa6.57□□□□□ -1.36
TMEM260-214ENST00000556975 MUC5BQ9HC84 5762 aaPredicted RBP6.55□□□□□ -1.36
TMEM260-214ENST00000556975 KRTAP6-2Q3LI66 62 aa6.52□□□□□ -1.37
TMEM260-214ENST00000556975 KRTAP5-8O75690 187 aa6.5□□□□□ -1.37
TMEM260-214ENST00000556975 OBSCNQ5VST9 7968 aa6.44□□□□□ -1.38
TMEM260-214ENST00000556975 MT3P25713 68 aa6.29□□□□□ -1.4
TMEM260-214ENST00000556975 KRTAP9-9Q9BYP9 154 aa6.27□□□□□ -1.41
TMEM260-214ENST00000556975 KRTAP5-1Q6L8H4 278 aa6.09□□□□□ -1.43
TMEM260-214ENST00000556975 BRK1Q8WUW1 75 aa5.98□□□□□ -1.45
TMEM260-214ENST00000556975 KRTAP4-12Q9BQ66 201 aa5.93□□□□□ -1.46
TMEM260-214ENST00000556975 LCE1EQ5T753 118 aa5.83□□□□□ -1.48
TMEM260-214ENST00000556975 PMAIP1Q13794 54 aa5.63□□□□□ -1.51
TMEM260-214ENST00000556975 SVIPQ8NHG7 77 aa5.57□□□□□ -1.52
TMEM260-214ENST00000556975 KRTAP4-2Q9BYR5 136 aa5.49□□□□□ -1.53
TMEM260-214ENST00000556975 PRAC1Q96KF2 57 aa5.44□□□□□ -1.54
TMEM260-214ENST00000556975 LCE1BQ5T7P3 118 aa5.42□□□□□ -1.54
TMEM260-214ENST00000556975 LCE1CQ5T751 118 aa5.4□□□□□ -1.54
TMEM260-214ENST00000556975 PRO0628Q9UI54 55 aa5.26□□□□□ -1.57
TMEM260-214ENST00000556975 LCE3DQ9BYE3 92 aa5.13□□□□□ -1.59
TMEM260-214ENST00000556975 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.92□□□□□ -1.62
TMEM260-214ENST00000556975 KTN1-AS1Q86SY8 53 aa4.9□□□□□ -1.63
TMEM260-214ENST00000556975 KRTAP5-11Q6L8G4 156 aa4.89□□□□□ -1.63
TMEM260-214ENST00000556975 LCE3EQ5T5B0 92 aa4.82□□□□□ -1.64
TMEM260-214ENST00000556975 LCE1FQ5T754 118 aa4.8□□□□□ -1.64
TMEM260-214ENST00000556975 LUZP6Q538Z0 58 aa4.65□□□□□ -1.67
TMEM260-214ENST00000556975 KRTAP21-2Q3LI59 83 aa4.51□□□□□ -1.69
TMEM260-214ENST00000556975 PHGR1C9JFL3 82 aa4.5□□□□□ -1.69
TMEM260-214ENST00000556975 H3BS24 57 aa4.38□□□□□ -1.71
TMEM260-214ENST00000556975 KRTAP4-4Q9BYR3 166 aa4.09□□□□□ -1.75
TMEM260-214ENST00000556975 MUC19Q7Z5P9 8384 aa4.01□□□□□ -1.77
TMEM260-214ENST00000556975 NDUFAF8A1L188 74 aa3.77□□□□□ -1.81
TMEM260-214ENST00000556975 PRM1P04553 51 aa3.54□□□□□ -1.84
TMEM260-214ENST00000556975 A0A0A0MQY5 61 aa3.5□□□□□ -1.85
TMEM260-214ENST00000556975 KRTAP21-1Q3LI58 79 aa3.4□□□□□ -1.87
TMEM260-214ENST00000556975 INE1O15225 51 aa3.23□□□□□ -1.89
TMEM260-214ENST00000556975 MUC16Q8WXI7 14507 aa2.78□□□□□ -1.96
Retrieved 78 of 20,778 RNA–protein pairs in 50 ms