RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 Q5W150 140 aa2.33□□□□□ -2.04
ATXN3-245ENST00000556958 LCA10Q71F78 164 aa2.33□□□□□ -2.04
ATXN3-245ENST00000556958 TP53AIP1Q9HCN2 124 aa2.32□□□□□ -2.04
ATXN3-245ENST00000556958 PLAC4Q8WY50 150 aa2.31□□□□□ -2.04
ATXN3-245ENST00000556958 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
ATXN3-245ENST00000556958 TRAV22A0A0B4J277 110 aa2.3□□□□□ -2.04
ATXN3-245ENST00000556958 C7orf65Q6ZTY9 151 aa2.3□□□□□ -2.04
ATXN3-245ENST00000556958 C1orf64Q8NEQ6 169 aa2.29□□□□□ -2.04
ATXN3-245ENST00000556958 KRTAP5-5Q701N2 237 aaPredicted RBP2.28□□□□□ -2.04
ATXN3-245ENST00000556958 H0Y9P7 68 aa2.27□□□□□ -2.05
ATXN3-245ENST00000556958 LINC00208Q96KT6 92 aa2.27□□□□□ -2.05
ATXN3-245ENST00000556958 S4R3F8 94 aa2.27□□□□□ -2.05
ATXN3-245ENST00000556958 BRK1Q8WUW1 75 aa2.26□□□□□ -2.05
ATXN3-245ENST00000556958 LOC101927531A0A1B0GV80 90 aa2.25□□□□□ -2.05
ATXN3-245ENST00000556958 LCE3EQ5T5B0 92 aa2.23□□□□□ -2.05
ATXN3-245ENST00000556958 A8MUN3 132 aa2.22□□□□□ -2.05
ATXN3-245ENST00000556958 LINC01558Q9Y6Z2 57 aa2.22□□□□□ -2.05
ATXN3-245ENST00000556958 MUC5ACP98088 5654 aa2.22□□□□□ -2.05
ATXN3-245ENST00000556958 PMAIP1Q13794 54 aa2.21□□□□□ -2.06
ATXN3-245ENST00000556958 KRTAP19-3Q7Z4W3 81 aa2.21□□□□□ -2.06
ATXN3-245ENST00000556958 COA5Q86WW8 74 aa2.21□□□□□ -2.06
ATXN3-245ENST00000556958 MUC5BQ9HC84 5762 aaPredicted RBP2.19□□□□□ -2.06
ATXN3-245ENST00000556958 CHKB-CPT1BH3BT56 60 aa2.19□□□□□ -2.06
ATXN3-245ENST00000556958 PSPHP1O15172 72 aa2.19□□□□□ -2.06
ATXN3-245ENST00000556958 ACYP2P14621 99 aa2.19□□□□□ -2.06
ATXN3-245ENST00000556958 CDC42SE1Q9NRR8 79 aa2.19□□□□□ -2.06
ATXN3-245ENST00000556958 SEC61GP60059 68 aa2.18□□□□□ -2.06
ATXN3-245ENST00000556958 PRR15LQ9BU68 103 aa2.18□□□□□ -2.06
ATXN3-245ENST00000556958 A6NED7 52 aa2.17□□□□□ -2.06
ATXN3-245ENST00000556958 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
ATXN3-245ENST00000556958 LCE1BQ5T7P3 118 aa2.17□□□□□ -2.06
ATXN3-245ENST00000556958 H0YAA0 97 aa2.16□□□□□ -2.06
ATXN3-245ENST00000556958 KTN1-AS1Q86SY8 53 aa2.16□□□□□ -2.06
ATXN3-245ENST00000556958 DMAC1Q96GE9 116 aa2.16□□□□□ -2.06
ATXN3-245ENST00000556958 PP632Q6XCG6 107 aa2.15□□□□□ -2.07
ATXN3-245ENST00000556958 MT1GP13640 62 aa2.14□□□□□ -2.07
ATXN3-245ENST00000556958 MT1EP04732 61 aa2.12□□□□□ -2.07
ATXN3-245ENST00000556958 KRTAP20-2Q3LI61 65 aa2.12□□□□□ -2.07
ATXN3-245ENST00000556958 ADM2Q7Z4H4 148 aa2.12□□□□□ -2.07
ATXN3-245ENST00000556958 SPTSSBQ8NFR3 76 aa2.12□□□□□ -2.07
ATXN3-245ENST00000556958 SPATA8Q6RVD6 105 aa2.11□□□□□ -2.07
ATXN3-245ENST00000556958 A0A1B0GU69 56 aa2.1□□□□□ -2.07
ATXN3-245ENST00000556958 UQCR11O14957 56 aa2.1□□□□□ -2.07
ATXN3-245ENST00000556958 KRTAP19-7Q3SYF9 63 aa2.1□□□□□ -2.07
ATXN3-245ENST00000556958 R4GN34 69 aa2.1□□□□□ -2.07
ATXN3-245ENST00000556958 CAMK2N1Q7Z7J9 78 aa2.09□□□□□ -2.07
ATXN3-245ENST00000556958 MIR22HGQ0VDD5 57 aa2.07□□□□□ -2.08
ATXN3-245ENST00000556958 KRTAP12-4P60329 112 aa2.06□□□□□ -2.08
ATXN3-245ENST00000556958 LINC01554Q52M75 96 aa2.06□□□□□ -2.08
ATXN3-245ENST00000556958 M0QZ58 72 aa2.05□□□□□ -2.08
ATXN3-245ENST00000556958 P0C880 135 aa2.04□□□□□ -2.08
ATXN3-245ENST00000556958 MT1MQ8N339 61 aa2.04□□□□□ -2.08
ATXN3-245ENST00000556958 K7ERS5 55 aa2□□□□□ -2.09
ATXN3-245ENST00000556958 A0A1B0GU33 70 aa1.99□□□□□ -2.09
ATXN3-245ENST00000556958 A0A0D9SG42 100 aa1.95□□□□□ -2.1
ATXN3-245ENST00000556958 KRTAP19-5Q3LI72 72 aa1.95□□□□□ -2.1
ATXN3-245ENST00000556958 MT1LQ93083 61 aa1.95□□□□□ -2.1
ATXN3-245ENST00000556958 SYNE1Q8NF91 8797 aaKnown RBP1.94□□□□□ -2.1
ATXN3-245ENST00000556958 KRTAP25-1Q3LHN0 102 aa1.93□□□□□ -2.1
ATXN3-245ENST00000556958 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
ATXN3-245ENST00000556958 SPINT4Q6UDR6 99 aa1.92□□□□□ -2.1
ATXN3-245ENST00000556958 KRTAP13-4Q3LI77 160 aa1.91□□□□□ -2.1
ATXN3-245ENST00000556958 ROMO1P60602 79 aa1.9□□□□□ -2.11
ATXN3-245ENST00000556958 LCE3DQ9BYE3 92 aa1.88□□□□□ -2.11
ATXN3-245ENST00000556958 KRTAP12-1P59990 96 aa1.83□□□□□ -2.12
ATXN3-245ENST00000556958 TNP1P09430 55 aa1.77□□□□□ -2.13
ATXN3-245ENST00000556958 C10orf95Q9H7T3 257 aa1.76□□□□□ -2.13
ATXN3-245ENST00000556958 LUZP6Q538Z0 58 aa1.7□□□□□ -2.14
ATXN3-245ENST00000556958 KRTAP6-2Q3LI66 62 aa1.69□□□□□ -2.14
ATXN3-245ENST00000556958 MT1AP04731 61 aa1.66□□□□□ -2.14
ATXN3-245ENST00000556958 KRTAP6-1Q3LI64 71 aa1.65□□□□□ -2.15
ATXN3-245ENST00000556958 KRTAP12-3P60328 96 aa1.64□□□□□ -2.15
ATXN3-245ENST00000556958 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
ATXN3-245ENST00000556958 PHGR1C9JFL3 82 aa1.51□□□□□ -2.17
ATXN3-245ENST00000556958 INE1O15225 51 aa1.48□□□□□ -2.17
ATXN3-245ENST00000556958 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
ATXN3-245ENST00000556958 PRM1P04553 51 aa0.97□□□□□ -2.25
ATXN3-245ENST00000556958 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 81.5 ms