RNA–Protein interactions for RNA: ENST00000556838.5

RBM23-223, Transcript of RNA binding motif protein 23, human

TSL 2

Gene RBM23, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM23-223	ENST00000556838	LCE5A	Q5TCM9	118 aa		4.54	□□□□□ -1.68
RBM23-223	ENST00000556838		K7ERS5	55 aa		4.53	□□□□□ -1.68
RBM23-223	ENST00000556838	PSPHP1	O15172	72 aa		4.53	□□□□□ -1.68
RBM23-223	ENST00000556838	LCE3A	Q5TA76	89 aa		4.5	□□□□□ -1.69
RBM23-223	ENST00000556838	MT1G	P13640	62 aa		4.47	□□□□□ -1.69
RBM23-223	ENST00000556838	KRTAP4-9	Q9BYQ8	210 aa		4.47	□□□□□ -1.69
RBM23-223	ENST00000556838	PP632	Q6XCG6	107 aa		4.46	□□□□□ -1.7
RBM23-223	ENST00000556838		A6NED7	52 aa		4.41	□□□□□ -1.7
RBM23-223	ENST00000556838	KRTAP25-1	Q3LHN0	102 aa		4.41	□□□□□ -1.7
RBM23-223	ENST00000556838	MT1L	Q93083	61 aa		4.41	□□□□□ -1.7
RBM23-223	ENST00000556838	KRTAP12-3	P60328	96 aa		4.36	□□□□□ -1.71
RBM23-223	ENST00000556838	MT1M	Q8N339	61 aa		4.36	□□□□□ -1.71
RBM23-223	ENST00000556838	HMCN1	Q96RW7	5635 aa		4.33	□□□□□ -1.72
RBM23-223	ENST00000556838	PRO0628	Q9UI54	55 aa		4.32	□□□□□ -1.72
RBM23-223	ENST00000556838	LCE1D	Q5T752	114 aa		4.3	□□□□□ -1.72
RBM23-223	ENST00000556838	KRTAP23-1	A1A580	65 aa		4.27	□□□□□ -1.73
RBM23-223	ENST00000556838	BRK1	Q8WUW1	75 aa		4.27	□□□□□ -1.73
RBM23-223	ENST00000556838	MT4	P47944	62 aa		4.26	□□□□□ -1.73
RBM23-223	ENST00000556838	CDC42SE1	Q9NRR8	79 aa		4.26	□□□□□ -1.73
RBM23-223	ENST00000556838	AHNAK2	Q8IVF2	5795 aa		4.25	□□□□□ -1.73
RBM23-223	ENST00000556838	KRTAP4-3	Q9BYR4	195 aa		4.22	□□□□□ -1.73
RBM23-223	ENST00000556838	LOC100996750	A0A140TA64	210 aa		4.2	□□□□□ -1.74
RBM23-223	ENST00000556838	KRTAP4-6	Q9BYQ5	205 aa		4.2	□□□□□ -1.74
RBM23-223	ENST00000556838	ROMO1	P60602	79 aa		4.19	□□□□□ -1.74
RBM23-223	ENST00000556838	KRTAP19-4	Q3LI73	84 aa		4.19	□□□□□ -1.74
RBM23-223	ENST00000556838	LCE4A	Q5TA78	99 aa		4.19	□□□□□ -1.74
RBM23-223	ENST00000556838	KRTAP4-7	Q9BYR0	210 aa		4.16	□□□□□ -1.74
RBM23-223	ENST00000556838	KRTAP15-1	Q3LI76	137 aa		4.12	□□□□□ -1.75
RBM23-223	ENST00000556838	KRTAP5-4	Q6L8H1	288 aa		4.1	□□□□□ -1.75
RBM23-223	ENST00000556838	PMAIP1	Q13794	54 aa		4.06	□□□□□ -1.76
RBM23-223	ENST00000556838	KRTAP5-10	Q6L8G5	202 aa		4.06	□□□□□ -1.76
RBM23-223	ENST00000556838	LCE3C	Q5T5A8	94 aa		4.02	□□□□□ -1.77
RBM23-223	ENST00000556838	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.98	□□□□□ -1.77
RBM23-223	ENST00000556838	KTN1-AS1	Q86SY8	53 aa		3.96	□□□□□ -1.78
RBM23-223	ENST00000556838	KRTAP5-3	Q6L8H2	238 aa		3.93	□□□□□ -1.78
RBM23-223	ENST00000556838	KRTAP12-4	P60329	112 aa		3.91	□□□□□ -1.78
RBM23-223	ENST00000556838	KRTAP5-7	Q6L8G8	165 aa		3.91	□□□□□ -1.78
RBM23-223	ENST00000556838	KRTAP20-2	Q3LI61	65 aa		3.89	□□□□□ -1.79
RBM23-223	ENST00000556838	SPRR5	A0A1B0GTR4	108 aa		3.88	□□□□□ -1.79
RBM23-223	ENST00000556838	SYNE1	Q8NF91	8797 aa	Known RBP	3.81	□□□□□ -1.8
RBM23-223	ENST00000556838	MT1A	P04731	61 aa		3.76	□□□□□ -1.81
RBM23-223	ENST00000556838	KRTAP9-6	A8MVA2	160 aa		3.74	□□□□□ -1.81
RBM23-223	ENST00000556838	PRAC1	Q96KF2	57 aa		3.72	□□□□□ -1.81
RBM23-223	ENST00000556838	KRTAP6-1	Q3LI64	71 aa		3.71	□□□□□ -1.82
RBM23-223	ENST00000556838	KRTAP9-4	Q9BYQ2	154 aa		3.63	□□□□□ -1.83
RBM23-223	ENST00000556838	KRTAP5-2	Q701N4	177 aa		3.61	□□□□□ -1.83
RBM23-223	ENST00000556838	KRTAP4-11	Q9BYQ6	195 aa		3.6	□□□□□ -1.83
RBM23-223	ENST00000556838	AHNAK	Q09666	5890 aa	Known RBP	3.58	□□□□□ -1.84
RBM23-223	ENST00000556838	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.53	□□□□□ -1.84
RBM23-223	ENST00000556838	KRTAP6-2	Q3LI66	62 aa		3.53	□□□□□ -1.84
RBM23-223	ENST00000556838	MUC5AC	P98088	5654 aa		3.52	□□□□□ -1.85
RBM23-223	ENST00000556838	OBSCN	Q5VST9	7968 aa		3.51	□□□□□ -1.85
RBM23-223	ENST00000556838	KRTAP4-12	Q9BQ66	201 aa		3.5	□□□□□ -1.85
RBM23-223	ENST00000556838	KRTAP9-9	Q9BYP9	154 aa		3.5	□□□□□ -1.85
RBM23-223	ENST00000556838	KRTAP5-8	O75690	187 aa		3.48	□□□□□ -1.85
RBM23-223	ENST00000556838	MT3	P25713	68 aa		3.46	□□□□□ -1.86
RBM23-223	ENST00000556838		H3BS24	57 aa		3.27	□□□□□ -1.89
RBM23-223	ENST00000556838	KRTAP4-2	Q9BYR5	136 aa		3.25	□□□□□ -1.89
RBM23-223	ENST00000556838	KRTAP5-1	Q6L8H4	278 aa		3.23	□□□□□ -1.89
RBM23-223	ENST00000556838	LCE1E	Q5T753	118 aa		3.16	□□□□□ -1.9
RBM23-223	ENST00000556838	NDUFAF8	A1L188	74 aa		3.13	□□□□□ -1.91
RBM23-223	ENST00000556838	LUZP6	Q538Z0	58 aa		3.07	□□□□□ -1.92
RBM23-223	ENST00000556838		A0A0A0MQY5	61 aa		2.98	□□□□□ -1.93
RBM23-223	ENST00000556838	LCE1B	Q5T7P3	118 aa		2.94	□□□□□ -1.94
RBM23-223	ENST00000556838	LCE3D	Q9BYE3	92 aa		2.93	□□□□□ -1.94
RBM23-223	ENST00000556838	LCE1C	Q5T751	118 aa		2.92	□□□□□ -1.94
RBM23-223	ENST00000556838	LCE3E	Q5T5B0	92 aa		2.78	□□□□□ -1.96
RBM23-223	ENST00000556838	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.66	□□□□□ -1.98
RBM23-223	ENST00000556838	INE1	O15225	51 aa		2.64	□□□□□ -1.99
RBM23-223	ENST00000556838	KRTAP5-11	Q6L8G4	156 aa		2.62	□□□□□ -1.99
RBM23-223	ENST00000556838	LCE1F	Q5T754	118 aa		2.55	□□□□□ -2
RBM23-223	ENST00000556838	KRTAP21-2	Q3LI59	83 aa		2.44	□□□□□ -2.02
RBM23-223	ENST00000556838	PHGR1	C9JFL3	82 aa		2.39	□□□□□ -2.03
RBM23-223	ENST00000556838	KRTAP4-4	Q9BYR3	166 aa		2.24	□□□□□ -2.05
RBM23-223	ENST00000556838	MUC19	Q7Z5P9	8384 aa		2.17	□□□□□ -2.06
RBM23-223	ENST00000556838	PRM1	P04553	51 aa		2.13	□□□□□ -2.07
RBM23-223	ENST00000556838	KRTAP21-1	Q3LI58	79 aa		1.78	□□□□□ -2.12
RBM23-223	ENST00000556838	MUC16	Q8WXI7	14507 aa		1.5	□□□□□ -2.17

Retrieved 78 of 20,778 RNA–protein pairs in 38 ms