RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 HIST1H4AP62805 103 aaKnown RBP1.86□□□□□ -2.11
HIF1A-209ENST00000556827 V9GYY9 64 aa1.86□□□□□ -2.11
HIF1A-209ENST00000556827 A0A1B0GU33 70 aa1.85□□□□□ -2.11
HIF1A-209ENST00000556827 A6NED7 52 aa1.85□□□□□ -2.11
HIF1A-209ENST00000556827 MT-ATP8P03928 68 aa1.85□□□□□ -2.11
HIF1A-209ENST00000556827 MP68P56378 58 aa1.85□□□□□ -2.11
HIF1A-209ENST00000556827 COL5A1-AS1Q5SY13 56 aa1.85□□□□□ -2.11
HIF1A-209ENST00000556827 GTF2H5Q6ZYL4 71 aa1.85□□□□□ -2.11
HIF1A-209ENST00000556827 ATP5EP2Q5VTU8 51 aa1.84□□□□□ -2.11
HIF1A-209ENST00000556827 LINC00208Q96KT6 92 aa1.84□□□□□ -2.11
HIF1A-209ENST00000556827 F8W1H4 67 aa1.83□□□□□ -2.12
HIF1A-209ENST00000556827 ANAPC13Q9BS18 74 aa1.83□□□□□ -2.12
HIF1A-209ENST00000556827 ETDBQ3ZM63 59 aa1.82□□□□□ -2.12
HIF1A-209ENST00000556827 SPTSSBQ8NFR3 76 aa1.81□□□□□ -2.12
HIF1A-209ENST00000556827 H3BPC8 53 aa1.78□□□□□ -2.12
HIF1A-209ENST00000556827 KRTAP13-4Q3LI77 160 aa1.78□□□□□ -2.12
HIF1A-209ENST00000556827 TRAV7A0A075B6U4 112 aa1.77□□□□□ -2.13
HIF1A-209ENST00000556827 SCGB1A1P11684 91 aa1.77□□□□□ -2.13
HIF1A-209ENST00000556827 DMAC1Q96GE9 116 aa1.77□□□□□ -2.13
HIF1A-209ENST00000556827 ACYP2P14621 99 aa1.76□□□□□ -2.13
HIF1A-209ENST00000556827 LINC00643Q86TS7 51 aa1.76□□□□□ -2.13
HIF1A-209ENST00000556827 CHKB-CPT1BH3BT56 60 aa1.75□□□□□ -2.13
HIF1A-209ENST00000556827 GPR98Q8WXG9 6306 aa1.72□□□□□ -2.13
HIF1A-209ENST00000556827 LOC105371267A0A1B0GV96 52 aa1.72□□□□□ -2.13
HIF1A-209ENST00000556827 KRTAP19-3Q7Z4W3 81 aa1.72□□□□□ -2.13
HIF1A-209ENST00000556827 CYSTM1Q9H1C7 97 aa1.71□□□□□ -2.14
HIF1A-209ENST00000556827 MT1EP04732 61 aa1.69□□□□□ -2.14
HIF1A-209ENST00000556827 MT1GP13640 62 aa1.69□□□□□ -2.14
HIF1A-209ENST00000556827 MT4P47944 62 aa1.69□□□□□ -2.14
HIF1A-209ENST00000556827 A0A0D9SG42 100 aa1.68□□□□□ -2.14
HIF1A-209ENST00000556827 J3QR89 54 aa1.68□□□□□ -2.14
HIF1A-209ENST00000556827 KRTAP19-7Q3SYF9 63 aa1.68□□□□□ -2.14
HIF1A-209ENST00000556827 SMIM20Q8N5G0 67 aa1.67□□□□□ -2.14
HIF1A-209ENST00000556827 SERP1Q9Y6X1 66 aa1.66□□□□□ -2.14
HIF1A-209ENST00000556827 KRTAP19-5Q3LI72 72 aa1.65□□□□□ -2.15
HIF1A-209ENST00000556827 DSTQ03001 7570 aaKnown RBP1.64□□□□□ -2.15
HIF1A-209ENST00000556827 KRTAP5-10Q6L8G5 202 aa1.63□□□□□ -2.15
HIF1A-209ENST00000556827 MT1MQ8N339 61 aa1.62□□□□□ -2.15
HIF1A-209ENST00000556827 MT1LQ93083 61 aa1.61□□□□□ -2.15
HIF1A-209ENST00000556827 SNURFQ9Y675 71 aa1.6□□□□□ -2.15
HIF1A-209ENST00000556827 SPATA8Q6RVD6 105 aa1.59□□□□□ -2.15
HIF1A-209ENST00000556827 TNP1P09430 55 aa1.58□□□□□ -2.16
HIF1A-209ENST00000556827 C10orf95Q9H7T3 257 aa1.58□□□□□ -2.16
HIF1A-209ENST00000556827 COA5Q86WW8 74 aa1.57□□□□□ -2.16
HIF1A-209ENST00000556827 A0A1B0GV90 55 aa1.56□□□□□ -2.16
HIF1A-209ENST00000556827 SERP2Q8N6R1 65 aa1.55□□□□□ -2.16
HIF1A-209ENST00000556827 A0A1B0GU69 56 aa1.53□□□□□ -2.16
HIF1A-209ENST00000556827 K7ERU9 68 aa1.53□□□□□ -2.16
HIF1A-209ENST00000556827 KRTAP20-2Q3LI61 65 aa1.53□□□□□ -2.16
HIF1A-209ENST00000556827 AHNAK2Q8IVF2 5795 aa1.5□□□□□ -2.17
HIF1A-209ENST00000556827 PRR15LQ9BU68 103 aa1.49□□□□□ -2.17
HIF1A-209ENST00000556827 COX7CP15954 63 aa1.44□□□□□ -2.18
HIF1A-209ENST00000556827 H7BZZ5 65 aa1.42□□□□□ -2.18
HIF1A-209ENST00000556827 UQCR11O14957 56 aa1.4□□□□□ -2.19
HIF1A-209ENST00000556827 MT1AP04731 61 aa1.37□□□□□ -2.19
HIF1A-209ENST00000556827 ATP5EP56381 51 aaPredicted RBP1.37□□□□□ -2.19
HIF1A-209ENST00000556827 LINC01558Q9Y6Z2 57 aa1.36□□□□□ -2.19
HIF1A-209ENST00000556827 MIR22HGQ0VDD5 57 aa1.35□□□□□ -2.19
HIF1A-209ENST00000556827 KRTAP6-1Q3LI64 71 aa1.35□□□□□ -2.19
HIF1A-209ENST00000556827 KRTAP6-2Q3LI66 62 aa1.34□□□□□ -2.19
HIF1A-209ENST00000556827 MUC5ACP98088 5654 aa1.33□□□□□ -2.2
HIF1A-209ENST00000556827 RPS28P62857 69 aaKnown RBP1.32□□□□□ -2.2
HIF1A-209ENST00000556827 AHNAKQ09666 5890 aaKnown RBP1.32□□□□□ -2.2
HIF1A-209ENST00000556827 CDC42SE1Q9NRR8 79 aa1.29□□□□□ -2.2
HIF1A-209ENST00000556827 CCDC179H3BU77 68 aa1.27□□□□□ -2.21
HIF1A-209ENST00000556827 TMEM258P61165 79 aa1.26□□□□□ -2.21
HIF1A-209ENST00000556827 Q1T7F1 81 aa1.24□□□□□ -2.21
HIF1A-209ENST00000556827 ROMO1P60602 79 aa1.23□□□□□ -2.21
HIF1A-209ENST00000556827 MUC5BQ9HC84 5762 aaPredicted RBP1.23□□□□□ -2.21
HIF1A-209ENST00000556827 SYNE1Q8NF91 8797 aaKnown RBP1.21□□□□□ -2.22
HIF1A-209ENST00000556827 KTN1-AS1Q86SY8 53 aa1.18□□□□□ -2.22
HIF1A-209ENST00000556827 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.23
HIF1A-209ENST00000556827 PHGR1C9JFL3 82 aa0.99□□□□□ -2.25
HIF1A-209ENST00000556827 BRK1Q8WUW1 75 aa0.95□□□□□ -2.26
HIF1A-209ENST00000556827 PMAIP1Q13794 54 aa0.94□□□□□ -2.26
HIF1A-209ENST00000556827 KRTAP21-1Q3LI58 79 aa0.77□□□□□ -2.29
HIF1A-209ENST00000556827 INE1O15225 51 aa0.64□□□□□ -2.31
HIF1A-209ENST00000556827 PRM1P04553 51 aa0.6□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 78.4 ms