RNA–Protein interactions for RNA: ENST00000556633.5

GPHN-214, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 512 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-214ENST00000556633 PCLOQ9Y6V0 5065 aa0.99□□□□□ -2.25
GPHN-214ENST00000556633 VPS13BQ7Z7G8 4022 aa0.99□□□□□ -2.25
GPHN-214ENST00000556633 SPINK6Q6UWN8 80 aa0.98□□□□□ -2.25
GPHN-214ENST00000556633 HERC1Q15751 4861 aa0.97□□□□□ -2.25
GPHN-214ENST00000556633 SPART-AS1P0CW21 52 aa0.96□□□□□ -2.26
GPHN-214ENST00000556633 TNXBP22105 4242 aa0.96□□□□□ -2.26
GPHN-214ENST00000556633 RPS29P62273 56 aaKnown RBP0.95□□□□□ -2.26
GPHN-214ENST00000556633 HMCN2Q8NDA2 5059 aa0.95□□□□□ -2.26
GPHN-214ENST00000556633 TNP1P09430 55 aa0.94□□□□□ -2.26
GPHN-214ENST00000556633 KRTAP2-3P0C7H8 128 aa0.93□□□□□ -2.26
GPHN-214ENST00000556633 KRTAP2-4Q9BYR9 128 aa0.93□□□□□ -2.26
GPHN-214ENST00000556633 KRTAP2-1Q9BYU5 128 aa0.93□□□□□ -2.26
GPHN-214ENST00000556633 SRRM2Q9UQ35 2752 aaKnown RBP0.93□□□□□ -2.26
GPHN-214ENST00000556633 C9orf92A6NGG3 77 aa0.92□□□□□ -2.26
GPHN-214ENST00000556633 LRP2P98164 4655 aa0.91□□□□□ -2.26
GPHN-214ENST00000556633 LPAP08519 4548 aa0.91□□□□□ -2.26
GPHN-214ENST00000556633 MUC17Q685J3 4493 aa0.91□□□□□ -2.26
GPHN-214ENST00000556633 DEFB135Q30KP9 77 aa0.88□□□□□ -2.27
GPHN-214ENST00000556633 KRTAP8-1Q8IUC2 63 aa0.88□□□□□ -2.27
GPHN-214ENST00000556633 DMBT1Q9UGM3 2413 aaPredicted RBP0.88□□□□□ -2.27
GPHN-214ENST00000556633 UBR4Q5T4S7 5183 aa0.88□□□□□ -2.27
GPHN-214ENST00000556633 RNF213Q63HN8 5207 aa0.88□□□□□ -2.27
GPHN-214ENST00000556633 HTN3P15516 51 aa0.85□□□□□ -2.27
GPHN-214ENST00000556633 FAT4Q6V0I7 4981 aa0.84□□□□□ -2.27
GPHN-214ENST00000556633 M0R2T5 61 aa0.84□□□□□ -2.27
GPHN-214ENST00000556633 FLGP20930 4061 aaPredicted RBP0.83□□□□□ -2.28
GPHN-214ENST00000556633 DEFB4AO15263 64 aa0.83□□□□□ -2.28
GPHN-214ENST00000556633 MT1HL1P0DM35 61 aa0.79□□□□□ -2.28
GPHN-214ENST00000556633 MUC2Q02817 5179 aa0.79□□□□□ -2.28
GPHN-214ENST00000556633 SMR3BP02814 79 aaPredicted RBP0.77□□□□□ -2.29
GPHN-214ENST00000556633 KRTAP19-2Q3LHN2 52 aa0.76□□□□□ -2.29
GPHN-214ENST00000556633 USH2AO75445 5202 aa0.75□□□□□ -2.29
GPHN-214ENST00000556633 SSPOA2VEC9 5147 aa0.75□□□□□ -2.29
GPHN-214ENST00000556633 KRTAP19-5Q3LI72 72 aa0.75□□□□□ -2.29
GPHN-214ENST00000556633 PRM1P04553 51 aa0.73□□□□□ -2.29
GPHN-214ENST00000556633 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
GPHN-214ENST00000556633 MT1AP04731 61 aa0.72□□□□□ -2.29
GPHN-214ENST00000556633 KRTAP5-10Q6L8G5 202 aa0.7□□□□□ -2.3
GPHN-214ENST00000556633 GPR98Q8WXG9 6306 aa0.7□□□□□ -2.3
GPHN-214ENST00000556633 SPRR2GQ9BYE4 73 aa0.66□□□□□ -2.3
GPHN-214ENST00000556633 KRTAP19-3Q7Z4W3 81 aa0.65□□□□□ -2.31
GPHN-214ENST00000556633 MT1HP80294 61 aa0.64□□□□□ -2.31
GPHN-214ENST00000556633 KMT2DO14686 5537 aa0.64□□□□□ -2.31
GPHN-214ENST00000556633 MT1EP04732 61 aa0.63□□□□□ -2.31
GPHN-214ENST00000556633 MT1FP04733 61 aa0.63□□□□□ -2.31
GPHN-214ENST00000556633 SPRR2DP22532 72 aa0.63□□□□□ -2.31
GPHN-214ENST00000556633 SPRR2BP35325 72 aa0.63□□□□□ -2.31
GPHN-214ENST00000556633 SPRR2AP35326 72 aa0.63□□□□□ -2.31
GPHN-214ENST00000556633 MUC12Q9UKN1 5478 aa0.62□□□□□ -2.31
GPHN-214ENST00000556633 MT2AP02795 61 aa0.62□□□□□ -2.31
GPHN-214ENST00000556633 MUC5BQ9HC84 5762 aaPredicted RBP0.62□□□□□ -2.31
GPHN-214ENST00000556633 MT1BP07438 61 aa0.61□□□□□ -2.31
GPHN-214ENST00000556633 KRTAP6-2Q3LI66 62 aa0.61□□□□□ -2.31
GPHN-214ENST00000556633 SPRR2FQ96RM1 72 aa0.61□□□□□ -2.31
GPHN-214ENST00000556633 FSIP2Q5CZC0 6907 aa0.61□□□□□ -2.31
GPHN-214ENST00000556633 AHNAKQ09666 5890 aaKnown RBP0.61□□□□□ -2.31
GPHN-214ENST00000556633 MT1LQ93083 61 aa0.6□□□□□ -2.31
GPHN-214ENST00000556633 SYNE1Q8NF91 8797 aaKnown RBP0.6□□□□□ -2.31
GPHN-214ENST00000556633 KRTAP19-8Q3LI54 63 aa0.59□□□□□ -2.31
GPHN-214ENST00000556633 KRTAP21-1Q3LI58 79 aa0.59□□□□□ -2.31
GPHN-214ENST00000556633 MDN1Q9NU22 5596 aa0.58□□□□□ -2.32
GPHN-214ENST00000556633 AHNAK2Q8IVF2 5795 aa0.58□□□□□ -2.32
GPHN-214ENST00000556633 MT1XP80297 61 aa0.58□□□□□ -2.32
GPHN-214ENST00000556633 SPRR2EP22531 72 aa0.57□□□□□ -2.32
GPHN-214ENST00000556633 KRTAP19-6Q3LI70 58 aa0.56□□□□□ -2.32
GPHN-214ENST00000556633 MACF1Q9UPN3 7388 aaKnown RBP0.55□□□□□ -2.32
GPHN-214ENST00000556633 KRTAP19-7Q3SYF9 63 aa0.53□□□□□ -2.32
GPHN-214ENST00000556633 SYNE2Q8WXH0 6885 aaKnown RBP0.5□□□□□ -2.33
GPHN-214ENST00000556633 NEBP20929 6669 aa0.5□□□□□ -2.33
GPHN-214ENST00000556633 DSTQ03001 7570 aaKnown RBP0.46□□□□□ -2.34
GPHN-214ENST00000556633 MT1GP13640 62 aa0.44□□□□□ -2.34
GPHN-214ENST00000556633 MT1MQ8N339 61 aa0.44□□□□□ -2.34
GPHN-214ENST00000556633 KRTAP6-1Q3LI64 71 aa0.42□□□□□ -2.34
GPHN-214ENST00000556633 KRTAP20-1Q3LI63 56 aa0.41□□□□□ -2.34
GPHN-214ENST00000556633 MUC5ACP98088 5654 aa0.41□□□□□ -2.34
GPHN-214ENST00000556633 KRTAP20-2Q3LI61 65 aa0.4□□□□□ -2.35
GPHN-214ENST00000556633 PHGR1C9JFL3 82 aa0.39□□□□□ -2.35
GPHN-214ENST00000556633 MT4P47944 62 aa0.36□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 18.7 ms