RNA–Protein interactions for RNA: ENST00000556609.5

EFCAB11-211, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3 BASIC

Gene EFCAB11, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-211ENST00000556609 CCDC179H3BU77 68 aa6.3□□□□□ -1.4
EFCAB11-211ENST00000556609 LCE3AQ5TA76 89 aa6.29□□□□□ -1.4
EFCAB11-211ENST00000556609 LINC01558Q9Y6Z2 57 aa6.27□□□□□ -1.41
EFCAB11-211ENST00000556609 LCE4AQ5TA78 99 aa6.26□□□□□ -1.41
EFCAB11-211ENST00000556609 LCE1DQ5T752 114 aa6.2□□□□□ -1.42
EFCAB11-211ENST00000556609 UQCR11O14957 56 aa6.18□□□□□ -1.42
EFCAB11-211ENST00000556609 HMCN1Q96RW7 5635 aa6.16□□□□□ -1.42
EFCAB11-211ENST00000556609 TMEM258P61165 79 aa6.14□□□□□ -1.43
EFCAB11-211ENST00000556609 MT4P47944 62 aa6.12□□□□□ -1.43
EFCAB11-211ENST00000556609 KRTAP12-3P60328 96 aa6.11□□□□□ -1.43
EFCAB11-211ENST00000556609 KRTAP4-3Q9BYR4 195 aa6.09□□□□□ -1.43
EFCAB11-211ENST00000556609 KRTAP5-4Q6L8H1 288 aa6.08□□□□□ -1.44
EFCAB11-211ENST00000556609 KRTAP4-7Q9BYR0 210 aa6.04□□□□□ -1.44
EFCAB11-211ENST00000556609 KRTAP25-1Q3LHN0 102 aa6.01□□□□□ -1.45
EFCAB11-211ENST00000556609 K7ERS5 55 aa6□□□□□ -1.45
EFCAB11-211ENST00000556609 MIR22HGQ0VDD5 57 aa6□□□□□ -1.45
EFCAB11-211ENST00000556609 AHNAK2Q8IVF2 5795 aa5.95□□□□□ -1.46
EFCAB11-211ENST00000556609 V9GYY9 64 aa5.92□□□□□ -1.46
EFCAB11-211ENST00000556609 KRTAP19-4Q3LI73 84 aa5.91□□□□□ -1.46
EFCAB11-211ENST00000556609 KRTAP23-1A1A580 65 aa5.82□□□□□ -1.48
EFCAB11-211ENST00000556609 KRTAP5-10Q6L8G5 202 aa5.81□□□□□ -1.48
EFCAB11-211ENST00000556609 Q1T7F1 81 aa5.8□□□□□ -1.48
EFCAB11-211ENST00000556609 PSPHP1O15172 72 aa5.79□□□□□ -1.48
EFCAB11-211ENST00000556609 KRTAP5-5Q701N2 237 aaPredicted RBP5.79□□□□□ -1.48
EFCAB11-211ENST00000556609 SPRR5A0A1B0GTR4 108 aa5.77□□□□□ -1.49
EFCAB11-211ENST00000556609 KRTAP4-2Q9BYR5 136 aa5.77□□□□□ -1.49
EFCAB11-211ENST00000556609 KRTAP12-4P60329 112 aa5.76□□□□□ -1.49
EFCAB11-211ENST00000556609 KRTAP20-2Q3LI61 65 aa5.73□□□□□ -1.49
EFCAB11-211ENST00000556609 KRTAP15-1Q3LI76 137 aa5.69□□□□□ -1.5
EFCAB11-211ENST00000556609 KRTAP4-11Q9BYQ6 195 aa5.68□□□□□ -1.5
EFCAB11-211ENST00000556609 KRTAP5-3Q6L8H2 238 aa5.67□□□□□ -1.5
EFCAB11-211ENST00000556609 A6NED7 52 aa5.63□□□□□ -1.51
EFCAB11-211ENST00000556609 KRTAP5-7Q6L8G8 165 aa5.63□□□□□ -1.51
EFCAB11-211ENST00000556609 LCE3CQ5T5A8 94 aa5.62□□□□□ -1.51
EFCAB11-211ENST00000556609 CDC42SE1Q9NRR8 79 aa5.61□□□□□ -1.51
EFCAB11-211ENST00000556609 SYNE1Q8NF91 8797 aaKnown RBP5.55□□□□□ -1.52
EFCAB11-211ENST00000556609 H3BS24 57 aa5.52□□□□□ -1.53
EFCAB11-211ENST00000556609 ROMO1P60602 79 aa5.5□□□□□ -1.53
EFCAB11-211ENST00000556609 RPS28P62857 69 aaKnown RBP5.49□□□□□ -1.53
EFCAB11-211ENST00000556609 MT1AP04731 61 aa5.4□□□□□ -1.54
EFCAB11-211ENST00000556609 KRTAP6-1Q3LI64 71 aa5.32□□□□□ -1.56
EFCAB11-211ENST00000556609 KRTAP5-2Q701N4 177 aa5.3□□□□□ -1.56
EFCAB11-211ENST00000556609 KRTAP9-6A8MVA2 160 aa5.21□□□□□ -1.58
EFCAB11-211ENST00000556609 PCP4P48539 62 aa5.13□□□□□ -1.59
EFCAB11-211ENST00000556609 KRTAP6-2Q3LI66 62 aa5.12□□□□□ -1.59
EFCAB11-211ENST00000556609 KRTAP5-8O75690 187 aa5.07□□□□□ -1.6
EFCAB11-211ENST00000556609 MT3P25713 68 aa4.99□□□□□ -1.61
EFCAB11-211ENST00000556609 OBSCNQ5VST9 7968 aa4.98□□□□□ -1.61
EFCAB11-211ENST00000556609 AHNAKQ09666 5890 aaKnown RBP4.98□□□□□ -1.61
EFCAB11-211ENST00000556609 MUC5BQ9HC84 5762 aaPredicted RBP4.95□□□□□ -1.62
EFCAB11-211ENST00000556609 MUC5ACP98088 5654 aa4.92□□□□□ -1.62
EFCAB11-211ENST00000556609 KRTAP5-1Q6L8H4 278 aa4.76□□□□□ -1.65
EFCAB11-211ENST00000556609 BRK1Q8WUW1 75 aa4.68□□□□□ -1.66
EFCAB11-211ENST00000556609 LCE1EQ5T753 118 aa4.62□□□□□ -1.67
EFCAB11-211ENST00000556609 PMAIP1Q13794 54 aa4.43□□□□□ -1.7
EFCAB11-211ENST00000556609 LCE1BQ5T7P3 118 aa4.28□□□□□ -1.72
EFCAB11-211ENST00000556609 LCE1CQ5T751 118 aa4.26□□□□□ -1.73
EFCAB11-211ENST00000556609 PRAC1Q96KF2 57 aa4.2□□□□□ -1.74
EFCAB11-211ENST00000556609 LCE3DQ9BYE3 92 aa4.05□□□□□ -1.76
EFCAB11-211ENST00000556609 PRO0628Q9UI54 55 aa3.97□□□□□ -1.77
EFCAB11-211ENST00000556609 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.87□□□□□ -1.79
EFCAB11-211ENST00000556609 KRTAP5-11Q6L8G4 156 aa3.85□□□□□ -1.79
EFCAB11-211ENST00000556609 LCE1FQ5T754 118 aa3.82□□□□□ -1.8
EFCAB11-211ENST00000556609 KTN1-AS1Q86SY8 53 aa3.82□□□□□ -1.8
EFCAB11-211ENST00000556609 LCE3EQ5T5B0 92 aa3.8□□□□□ -1.8
EFCAB11-211ENST00000556609 LUZP6Q538Z0 58 aa3.74□□□□□ -1.81
EFCAB11-211ENST00000556609 SVIPQ8NHG7 77 aa3.69□□□□□ -1.82
EFCAB11-211ENST00000556609 KRTAP21-2Q3LI59 83 aa3.51□□□□□ -1.85
EFCAB11-211ENST00000556609 PHGR1C9JFL3 82 aa3.4□□□□□ -1.87
EFCAB11-211ENST00000556609 KRTAP4-4Q9BYR3 166 aa3.23□□□□□ -1.89
EFCAB11-211ENST00000556609 MUC19Q7Z5P9 8384 aa3.07□□□□□ -1.92
EFCAB11-211ENST00000556609 A0A0A0MQY5 61 aa2.94□□□□□ -1.94
EFCAB11-211ENST00000556609 PRM1P04553 51 aa2.76□□□□□ -1.97
EFCAB11-211ENST00000556609 NDUFAF8A1L188 74 aa2.73□□□□□ -1.97
EFCAB11-211ENST00000556609 KRTAP21-1Q3LI58 79 aa2.63□□□□□ -1.99
EFCAB11-211ENST00000556609 INE1O15225 51 aa2.25□□□□□ -2.05
EFCAB11-211ENST00000556609 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 94.7 ms