RNA–Protein interactions for RNA: ENST00000556454.1

CLMN-207, Transcript of calmin, humanhuman

TSL 2

Gene CLMN, Length 3,023 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMN-207ENST00000556454 KRTAP4-8A0A0G2JLE6 195 aa3.43□□□□□ -1.86
CLMN-207ENST00000556454 KRTAP4-12Q9BQ66 201 aa3.43□□□□□ -1.86
CLMN-207ENST00000556454 USH2AO75445 5202 aa3.41□□□□□ -1.86
CLMN-207ENST00000556454 LCE3BQ5TA77 95 aa3.39□□□□□ -1.87
CLMN-207ENST00000556454 KRTAP12-4P60329 112 aa3.39□□□□□ -1.87
CLMN-207ENST00000556454 MT1LQ93083 61 aa3.38□□□□□ -1.87
CLMN-207ENST00000556454 KRTAP9-9Q9BYP9 154 aa3.38□□□□□ -1.87
CLMN-207ENST00000556454 KRTAP9-4Q9BYQ2 154 aa3.38□□□□□ -1.87
CLMN-207ENST00000556454 MT1EP04732 61 aa3.31□□□□□ -1.88
CLMN-207ENST00000556454 CRCT1Q9UGL9 99 aa3.27□□□□□ -1.89
CLMN-207ENST00000556454 LCE1DQ5T752 114 aa3.22□□□□□ -1.89
CLMN-207ENST00000556454 KRTAP19-6Q3LI70 58 aa3.21□□□□□ -1.9
CLMN-207ENST00000556454 SSPOA2VEC9 5147 aa3.18□□□□□ -1.9
CLMN-207ENST00000556454 KRTAP4-9Q9BYQ8 210 aa3.18□□□□□ -1.9
CLMN-207ENST00000556454 OBSCNQ5VST9 7968 aa3.17□□□□□ -1.9
CLMN-207ENST00000556454 MT1GP13640 62 aa3.16□□□□□ -1.9
CLMN-207ENST00000556454 KRTAP4-3Q9BYR4 195 aa3.14□□□□□ -1.91
CLMN-207ENST00000556454 FCGBPQ9Y6R7 5405 aaPredicted RBP3.14□□□□□ -1.91
CLMN-207ENST00000556454 KRTAP9-7A8MTY7 169 aa3.14□□□□□ -1.91
CLMN-207ENST00000556454 DSTQ03001 7570 aaKnown RBP3.14□□□□□ -1.91
CLMN-207ENST00000556454 KRTAP4-2Q9BYR5 136 aa3.13□□□□□ -1.91
CLMN-207ENST00000556454 SYNE1Q8NF91 8797 aaKnown RBP3.1□□□□□ -1.91
CLMN-207ENST00000556454 MT1AP04731 61 aa3.09□□□□□ -1.92
CLMN-207ENST00000556454 PRM1P04553 51 aa3.06□□□□□ -1.92
CLMN-207ENST00000556454 KRTAP5-5Q701N2 237 aaPredicted RBP3.06□□□□□ -1.92
CLMN-207ENST00000556454 MT1MQ8N339 61 aa3.06□□□□□ -1.92
CLMN-207ENST00000556454 KRTAP6-3Q3LI67 103 aa3.03□□□□□ -1.92
CLMN-207ENST00000556454 FSIP2Q5CZC0 6907 aa3.02□□□□□ -1.93
CLMN-207ENST00000556454 KRTAP4-11Q9BYQ6 195 aa3.01□□□□□ -1.93
CLMN-207ENST00000556454 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
CLMN-207ENST00000556454 LCE5AQ5TCM9 118 aa2.99□□□□□ -1.93
CLMN-207ENST00000556454 KRTAP19-3Q7Z4W3 81 aa2.99□□□□□ -1.93
CLMN-207ENST00000556454 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
CLMN-207ENST00000556454 KRTAP2-2Q9BYT5 123 aa2.98□□□□□ -1.93
CLMN-207ENST00000556454 MUC12Q9UKN1 5478 aa2.98□□□□□ -1.93
CLMN-207ENST00000556454 LCE1AQ5T7P2 110 aa2.91□□□□□ -1.94
CLMN-207ENST00000556454 LCE4AQ5TA78 99 aa2.9□□□□□ -1.95
CLMN-207ENST00000556454 KRTAP5-3Q6L8H2 238 aa2.9□□□□□ -1.95
CLMN-207ENST00000556454 KRTAP6-1Q3LI64 71 aa2.87□□□□□ -1.95
CLMN-207ENST00000556454 KRTAP5-9P26371 169 aa2.87□□□□□ -1.95
CLMN-207ENST00000556454 KRTAP6-2Q3LI66 62 aa2.85□□□□□ -1.95
CLMN-207ENST00000556454 MACF1Q9UPN3 7388 aaKnown RBP2.82□□□□□ -1.96
CLMN-207ENST00000556454 SPRR2FQ96RM1 72 aa2.8□□□□□ -1.96
CLMN-207ENST00000556454 SYNE2Q8WXH0 6885 aaKnown RBP2.78□□□□□ -1.96
CLMN-207ENST00000556454 HMCN1Q96RW7 5635 aa2.78□□□□□ -1.96
CLMN-207ENST00000556454 LCE1EQ5T753 118 aa2.77□□□□□ -1.97
CLMN-207ENST00000556454 KRTAP20-1Q3LI63 56 aa2.74□□□□□ -1.97
CLMN-207ENST00000556454 NEBP20929 6669 aa2.72□□□□□ -1.97
CLMN-207ENST00000556454 MDN1Q9NU22 5596 aa2.63□□□□□ -1.99
CLMN-207ENST00000556454 SPRR2EP22531 72 aa2.63□□□□□ -1.99
CLMN-207ENST00000556454 SPRR2BP35325 72 aa2.63□□□□□ -1.99
CLMN-207ENST00000556454 SPRR2AP35326 72 aa2.63□□□□□ -1.99
CLMN-207ENST00000556454 LCE1FQ5T754 118 aa2.58□□□□□ -2
CLMN-207ENST00000556454 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
CLMN-207ENST00000556454 GPR98Q8WXG9 6306 aa2.56□□□□□ -2
CLMN-207ENST00000556454 SPRR2DP22532 72 aa2.54□□□□□ -2
CLMN-207ENST00000556454 MT3P25713 68 aa2.52□□□□□ -2.01
CLMN-207ENST00000556454 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
CLMN-207ENST00000556454 KRTAP5-4Q6L8H1 288 aa2.39□□□□□ -2.03
CLMN-207ENST00000556454 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.2□□□□□ -2.06
CLMN-207ENST00000556454 KRTAP20-2Q3LI61 65 aa2.18□□□□□ -2.06
CLMN-207ENST00000556454 AHNAK2Q8IVF2 5795 aa2.18□□□□□ -2.06
CLMN-207ENST00000556454 KRTAP5-10Q6L8G5 202 aa2.17□□□□□ -2.06
CLMN-207ENST00000556454 KRTAP5-7Q6L8G8 165 aa2.17□□□□□ -2.06
CLMN-207ENST00000556454 MUC5ACP98088 5654 aa2.17□□□□□ -2.06
CLMN-207ENST00000556454 KRTAP5-2Q701N4 177 aa2.17□□□□□ -2.06
CLMN-207ENST00000556454 MT4P47944 62 aa2.15□□□□□ -2.06
CLMN-207ENST00000556454 KRTAP5-1Q6L8H4 278 aa2.09□□□□□ -2.07
CLMN-207ENST00000556454 AHNAKQ09666 5890 aaKnown RBP2.09□□□□□ -2.08
CLMN-207ENST00000556454 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
CLMN-207ENST00000556454 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
CLMN-207ENST00000556454 LCE1BQ5T7P3 118 aa1.97□□□□□ -2.09
CLMN-207ENST00000556454 KRTAP4-4Q9BYR3 166 aa1.89□□□□□ -2.11
CLMN-207ENST00000556454 KRTAP5-8O75690 187 aa1.86□□□□□ -2.11
CLMN-207ENST00000556454 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
CLMN-207ENST00000556454 LCE1CQ5T751 118 aa1.85□□□□□ -2.11
CLMN-207ENST00000556454 PHGR1C9JFL3 82 aa1.34□□□□□ -2.2
CLMN-207ENST00000556454 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 6.5 ms