RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 TPRXLQ17RH7 258 aa2.17□□□□□ -2.06
ATXN3-241ENST00000556374 KRTAP13-4Q3LI77 160 aa2.16□□□□□ -2.06
ATXN3-241ENST00000556374 SSPOA2VEC9 5147 aa2.16□□□□□ -2.06
ATXN3-241ENST00000556374 P0C880 135 aa2.15□□□□□ -2.07
ATXN3-241ENST00000556374 USH2AO75445 5202 aa2.14□□□□□ -2.07
ATXN3-241ENST00000556374 R4GN34 69 aa2.13□□□□□ -2.07
ATXN3-241ENST00000556374 KRTAP12-1P59990 96 aa2.12□□□□□ -2.07
ATXN3-241ENST00000556374 C10orf95Q9H7T3 257 aa2.11□□□□□ -2.07
ATXN3-241ENST00000556374 FCGBPQ9Y6R7 5405 aaPredicted RBP2.11□□□□□ -2.07
ATXN3-241ENST00000556374 SYNE2Q8WXH0 6885 aaKnown RBP2.09□□□□□ -2.07
ATXN3-241ENST00000556374 MACF1Q9UPN3 7388 aaKnown RBP2.08□□□□□ -2.08
ATXN3-241ENST00000556374 MT1HP80294 61 aa2.05□□□□□ -2.08
ATXN3-241ENST00000556374 CAMK2N1Q7Z7J9 78 aa2.05□□□□□ -2.08
ATXN3-241ENST00000556374 PP632Q6XCG6 107 aa2.04□□□□□ -2.08
ATXN3-241ENST00000556374 KRTAP4-1Q9BYQ7 146 aa2.03□□□□□ -2.08
ATXN3-241ENST00000556374 NEBP20929 6669 aa2.02□□□□□ -2.09
ATXN3-241ENST00000556374 KRTAP19-2Q3LHN2 52 aa2.01□□□□□ -2.09
ATXN3-241ENST00000556374 KRTAP20-1Q3LI63 56 aa2.01□□□□□ -2.09
ATXN3-241ENST00000556374 KRTAP6-3Q3LI67 103 aa2□□□□□ -2.09
ATXN3-241ENST00000556374 LUZP6Q538Z0 58 aa2□□□□□ -2.09
ATXN3-241ENST00000556374 PLAC4Q8WY50 150 aa1.99□□□□□ -2.09
ATXN3-241ENST00000556374 MUC12Q9UKN1 5478 aa1.98□□□□□ -2.09
ATXN3-241ENST00000556374 FLGP20930 4061 aaPredicted RBP1.97□□□□□ -2.09
ATXN3-241ENST00000556374 M0R2T5 61 aa1.97□□□□□ -2.09
ATXN3-241ENST00000556374 TNP1P09430 55 aa1.96□□□□□ -2.1
ATXN3-241ENST00000556374 LCE3DQ9BYE3 92 aa1.96□□□□□ -2.1
ATXN3-241ENST00000556374 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
ATXN3-241ENST00000556374 GPR98Q8WXG9 6306 aa1.91□□□□□ -2.1
ATXN3-241ENST00000556374 KRTAP19-6Q3LI70 58 aa1.89□□□□□ -2.11
ATXN3-241ENST00000556374 KMT2DO14686 5537 aa1.88□□□□□ -2.11
ATXN3-241ENST00000556374 KRTAP10-10P60014 251 aa1.86□□□□□ -2.11
ATXN3-241ENST00000556374 MDN1Q9NU22 5596 aa1.86□□□□□ -2.11
ATXN3-241ENST00000556374 KRTAP2-3P0C7H8 128 aa1.85□□□□□ -2.11
ATXN3-241ENST00000556374 KRTAP5-7Q6L8G8 165 aa1.85□□□□□ -2.11
ATXN3-241ENST00000556374 KRTAP2-4Q9BYR9 128 aa1.85□□□□□ -2.11
ATXN3-241ENST00000556374 MT2AP02795 61 aa1.83□□□□□ -2.12
ATXN3-241ENST00000556374 SPRR2GQ9BYE4 73 aa1.83□□□□□ -2.12
ATXN3-241ENST00000556374 MT1FP04733 61 aa1.82□□□□□ -2.12
ATXN3-241ENST00000556374 SPRR5A0A1B0GTR4 108 aa1.8□□□□□ -2.12
ATXN3-241ENST00000556374 KRTAP2-1Q9BYU5 128 aa1.77□□□□□ -2.13
ATXN3-241ENST00000556374 PRO2289Q9P1D8 64 aa1.77□□□□□ -2.13
ATXN3-241ENST00000556374 KRTAP19-8Q3LI54 63 aa1.75□□□□□ -2.13
ATXN3-241ENST00000556374 KRTAP8-1Q8IUC2 63 aa1.73□□□□□ -2.13
ATXN3-241ENST00000556374 INE1O15225 51 aa1.71□□□□□ -2.14
ATXN3-241ENST00000556374 SPRR2EP22531 72 aa1.71□□□□□ -2.14
ATXN3-241ENST00000556374 SPRR2BP35325 72 aa1.71□□□□□ -2.14
ATXN3-241ENST00000556374 SPRR2AP35326 72 aa1.71□□□□□ -2.14
ATXN3-241ENST00000556374 KRTAP12-3P60328 96 aa1.71□□□□□ -2.14
ATXN3-241ENST00000556374 MT1BP07438 61 aa1.69□□□□□ -2.14
ATXN3-241ENST00000556374 MT1XP80297 61 aa1.69□□□□□ -2.14
ATXN3-241ENST00000556374 SPRR2DP22532 72 aa1.66□□□□□ -2.14
ATXN3-241ENST00000556374 SPRR2FQ96RM1 72 aa1.66□□□□□ -2.14
ATXN3-241ENST00000556374 AHNAK2Q8IVF2 5795 aa1.66□□□□□ -2.14
ATXN3-241ENST00000556374 KRTAP21-2Q3LI59 83 aa1.65□□□□□ -2.15
ATXN3-241ENST00000556374 DSTQ03001 7570 aaKnown RBP1.61□□□□□ -2.15
ATXN3-241ENST00000556374 HMCN1Q96RW7 5635 aa1.61□□□□□ -2.15
ATXN3-241ENST00000556374 KRTAP19-5Q3LI72 72 aa1.6□□□□□ -2.15
ATXN3-241ENST00000556374 KRTAP5-10Q6L8G5 202 aa1.59□□□□□ -2.15
ATXN3-241ENST00000556374 KRTAP19-7Q3SYF9 63 aa1.49□□□□□ -2.17
ATXN3-241ENST00000556374 MT1EP04732 61 aa1.48□□□□□ -2.17
ATXN3-241ENST00000556374 MT1LQ93083 61 aa1.48□□□□□ -2.17
ATXN3-241ENST00000556374 MT4P47944 62 aa1.47□□□□□ -2.17
ATXN3-241ENST00000556374 AHNAKQ09666 5890 aaKnown RBP1.46□□□□□ -2.18
ATXN3-241ENST00000556374 KRTAP12-4P60329 112 aa1.46□□□□□ -2.18
ATXN3-241ENST00000556374 MUC5BQ9HC84 5762 aaPredicted RBP1.43□□□□□ -2.18
ATXN3-241ENST00000556374 KRTAP19-3Q7Z4W3 81 aa1.4□□□□□ -2.19
ATXN3-241ENST00000556374 MUC5ACP98088 5654 aa1.4□□□□□ -2.19
ATXN3-241ENST00000556374 MT1GP13640 62 aa1.39□□□□□ -2.19
ATXN3-241ENST00000556374 MT1MQ8N339 61 aa1.39□□□□□ -2.19
ATXN3-241ENST00000556374 KRTAP20-2Q3LI61 65 aa1.31□□□□□ -2.2
ATXN3-241ENST00000556374 MT1AP04731 61 aa1.28□□□□□ -2.2
ATXN3-241ENST00000556374 KRTAP6-1Q3LI64 71 aa1.24□□□□□ -2.21
ATXN3-241ENST00000556374 SYNE1Q8NF91 8797 aaKnown RBP1.21□□□□□ -2.22
ATXN3-241ENST00000556374 PRM1P04553 51 aa1.19□□□□□ -2.22
ATXN3-241ENST00000556374 KRTAP6-2Q3LI66 62 aa1.13□□□□□ -2.23
ATXN3-241ENST00000556374 PHGR1C9JFL3 82 aa0.94□□□□□ -2.26
ATXN3-241ENST00000556374 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
ATXN3-241ENST00000556374 KRTAP21-1Q3LI58 79 aa0.73□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 114.3 ms