RNA–Protein interactions for RNA: ENST00000556360.1

PCNX4-212, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-212ENST00000556360 S4R3F8 94 aa1.39□□□□□ -2.19
PCNX4-212ENST00000556360 ROMO1P60602 79 aa1.38□□□□□ -2.19
PCNX4-212ENST00000556360 M0QZ58 72 aa1.36□□□□□ -2.19
PCNX4-212ENST00000556360 LRP2P98164 4655 aa1.35□□□□□ -2.19
PCNX4-212ENST00000556360 ABCA13Q86UQ4 5058 aa1.33□□□□□ -2.2
PCNX4-212ENST00000556360 MUC17Q685J3 4493 aa1.33□□□□□ -2.2
PCNX4-212ENST00000556360 EPPK1P58107 5090 aaKnown RBP1.33□□□□□ -2.2
PCNX4-212ENST00000556360 A0A0D9SG42 100 aa1.31□□□□□ -2.2
PCNX4-212ENST00000556360 FLGP20930 4061 aaPredicted RBP1.3□□□□□ -2.2
PCNX4-212ENST00000556360 KRTAP19-2Q3LHN2 52 aa1.3□□□□□ -2.2
PCNX4-212ENST00000556360 CRIPTQ9P021 101 aa1.3□□□□□ -2.2
PCNX4-212ENST00000556360 BIRC6Q9NR09 4857 aa1.3□□□□□ -2.2
PCNX4-212ENST00000556360 LPAP08519 4548 aa1.3□□□□□ -2.2
PCNX4-212ENST00000556360 HERC2O95714 4834 aa1.29□□□□□ -2.2
PCNX4-212ENST00000556360 HERC1Q15751 4861 aa1.28□□□□□ -2.2
PCNX4-212ENST00000556360 C10orf95Q9H7T3 257 aa1.28□□□□□ -2.2
PCNX4-212ENST00000556360 HMCN2Q8NDA2 5059 aa1.26□□□□□ -2.21
PCNX4-212ENST00000556360 PCLOQ9Y6V0 5065 aa1.24□□□□□ -2.21
PCNX4-212ENST00000556360 PLAC4Q8WY50 150 aa1.21□□□□□ -2.22
PCNX4-212ENST00000556360 SPRR2GQ9BYE4 73 aa1.21□□□□□ -2.22
PCNX4-212ENST00000556360 KRTAP5-10Q6L8G5 202 aa1.2□□□□□ -2.22
PCNX4-212ENST00000556360 RNF213Q63HN8 5207 aa1.2□□□□□ -2.22
PCNX4-212ENST00000556360 MUC2Q02817 5179 aa1.2□□□□□ -2.22
PCNX4-212ENST00000556360 TNP1P09430 55 aa1.19□□□□□ -2.22
PCNX4-212ENST00000556360 UBR4Q5T4S7 5183 aa1.16□□□□□ -2.22
PCNX4-212ENST00000556360 KRTAP19-8Q3LI54 63 aa1.16□□□□□ -2.22
PCNX4-212ENST00000556360 FAT4Q6V0I7 4981 aa1.15□□□□□ -2.23
PCNX4-212ENST00000556360 MT1HP80294 61 aa1.15□□□□□ -2.23
PCNX4-212ENST00000556360 PRO2289Q9P1D8 64 aa1.15□□□□□ -2.23
PCNX4-212ENST00000556360 MT2AP02795 61 aa1.14□□□□□ -2.23
PCNX4-212ENST00000556360 KRTAP8-1Q8IUC2 63 aa1.14□□□□□ -2.23
PCNX4-212ENST00000556360 MT1FP04733 61 aa1.13□□□□□ -2.23
PCNX4-212ENST00000556360 MT1BP07438 61 aa1.11□□□□□ -2.23
PCNX4-212ENST00000556360 MT1XP80297 61 aa1.11□□□□□ -2.23
PCNX4-212ENST00000556360 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
PCNX4-212ENST00000556360 M0R2T5 61 aa1.08□□□□□ -2.24
PCNX4-212ENST00000556360 INE1O15225 51 aa1.05□□□□□ -2.24
PCNX4-212ENST00000556360 USH2AO75445 5202 aa1.02□□□□□ -2.25
PCNX4-212ENST00000556360 SSPOA2VEC9 5147 aa1.01□□□□□ -2.25
PCNX4-212ENST00000556360 KRTAP19-5Q3LI72 72 aa1.01□□□□□ -2.25
PCNX4-212ENST00000556360 KRTAP19-7Q3SYF9 63 aa0.99□□□□□ -2.25
PCNX4-212ENST00000556360 KRTAP2-3P0C7H8 128 aa0.98□□□□□ -2.25
PCNX4-212ENST00000556360 KRTAP2-4Q9BYR9 128 aa0.98□□□□□ -2.25
PCNX4-212ENST00000556360 KRTAP2-1Q9BYU5 128 aa0.98□□□□□ -2.25
PCNX4-212ENST00000556360 MT1EP04732 61 aa0.96□□□□□ -2.26
PCNX4-212ENST00000556360 KRTAP19-6Q3LI70 58 aa0.96□□□□□ -2.26
PCNX4-212ENST00000556360 MT1LQ93083 61 aa0.96□□□□□ -2.26
PCNX4-212ENST00000556360 KMT2DO14686 5537 aa0.95□□□□□ -2.26
PCNX4-212ENST00000556360 MT1GP13640 62 aa0.9□□□□□ -2.27
PCNX4-212ENST00000556360 KRTAP19-3Q7Z4W3 81 aa0.9□□□□□ -2.27
PCNX4-212ENST00000556360 MT1MQ8N339 61 aa0.89□□□□□ -2.27
PCNX4-212ENST00000556360 MUC12Q9UKN1 5478 aa0.88□□□□□ -2.27
PCNX4-212ENST00000556360 MT1AP04731 61 aa0.84□□□□□ -2.27
PCNX4-212ENST00000556360 AHNAK2Q8IVF2 5795 aa0.84□□□□□ -2.28
PCNX4-212ENST00000556360 GPR98Q8WXG9 6306 aa0.83□□□□□ -2.28
PCNX4-212ENST00000556360 SPRR2FQ96RM1 72 aa0.81□□□□□ -2.28
PCNX4-212ENST00000556360 FSIP2Q5CZC0 6907 aa0.81□□□□□ -2.28
PCNX4-212ENST00000556360 MDN1Q9NU22 5596 aa0.81□□□□□ -2.28
PCNX4-212ENST00000556360 KRTAP6-1Q3LI64 71 aa0.8□□□□□ -2.28
PCNX4-212ENST00000556360 MACF1Q9UPN3 7388 aaKnown RBP0.75□□□□□ -2.29
PCNX4-212ENST00000556360 SPRR2EP22531 72 aa0.74□□□□□ -2.29
PCNX4-212ENST00000556360 SPRR2BP35325 72 aa0.74□□□□□ -2.29
PCNX4-212ENST00000556360 SPRR2AP35326 72 aa0.74□□□□□ -2.29
PCNX4-212ENST00000556360 DSTQ03001 7570 aaKnown RBP0.73□□□□□ -2.29
PCNX4-212ENST00000556360 PRM1P04553 51 aa0.72□□□□□ -2.29
PCNX4-212ENST00000556360 SPRR2DP22532 72 aa0.71□□□□□ -2.3
PCNX4-212ENST00000556360 KRTAP6-2Q3LI66 62 aa0.71□□□□□ -2.3
PCNX4-212ENST00000556360 SYNE1Q8NF91 8797 aaKnown RBP0.71□□□□□ -2.3
PCNX4-212ENST00000556360 SYNE2Q8WXH0 6885 aaKnown RBP0.7□□□□□ -2.3
PCNX4-212ENST00000556360 NEBP20929 6669 aa0.66□□□□□ -2.3
PCNX4-212ENST00000556360 AHNAKQ09666 5890 aaKnown RBP0.65□□□□□ -2.3
PCNX4-212ENST00000556360 KRTAP20-2Q3LI61 65 aa0.65□□□□□ -2.31
PCNX4-212ENST00000556360 MUC5ACP98088 5654 aa0.64□□□□□ -2.31
PCNX4-212ENST00000556360 KRTAP20-1Q3LI63 56 aa0.62□□□□□ -2.31
PCNX4-212ENST00000556360 MT4P47944 62 aa0.58□□□□□ -2.32
PCNX4-212ENST00000556360 MUC5BQ9HC84 5762 aaPredicted RBP0.56□□□□□ -2.32
PCNX4-212ENST00000556360 KRTAP21-1Q3LI58 79 aa0.49□□□□□ -2.33
PCNX4-212ENST00000556360 PHGR1C9JFL3 82 aa0.43□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 49.7 ms