RNA–Protein interactions for RNA: ENST00000556264.1

SPTLC2-204, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-204ENST00000556264 DMBT1Q9UGM3 2413 aaPredicted RBP1.31□□□□□ -2.2
SPTLC2-204ENST00000556264 FAT1Q14517 4588 aa1.29□□□□□ -2.2
SPTLC2-204ENST00000556264 FAT3Q8TDW7 4589 aa1.28□□□□□ -2.2
SPTLC2-204ENST00000556264 EPPK1P58107 5090 aaKnown RBP1.28□□□□□ -2.2
SPTLC2-204ENST00000556264 PLAC4Q8WY50 150 aa1.28□□□□□ -2.2
SPTLC2-204ENST00000556264 TNXBP22105 4242 aa1.27□□□□□ -2.21
SPTLC2-204ENST00000556264 BIRC6Q9NR09 4857 aa1.27□□□□□ -2.21
SPTLC2-204ENST00000556264 SYNE2Q8WXH0 6885 aaKnown RBP1.27□□□□□ -2.21
SPTLC2-204ENST00000556264 MUC19Q7Z5P9 8384 aa1.26□□□□□ -2.21
SPTLC2-204ENST00000556264 HSPG2P98160 4391 aa1.26□□□□□ -2.21
SPTLC2-204ENST00000556264 LRP1Q07954 4544 aaKnown RBP1.25□□□□□ -2.21
SPTLC2-204ENST00000556264 TNP1P09430 55 aa1.25□□□□□ -2.21
SPTLC2-204ENST00000556264 CRCT1Q9UGL9 99 aa1.24□□□□□ -2.21
SPTLC2-204ENST00000556264 FSIP2Q5CZC0 6907 aa1.24□□□□□ -2.21
SPTLC2-204ENST00000556264 MYCBP2O75592 4640 aa1.22□□□□□ -2.21
SPTLC2-204ENST00000556264 M0R2T5 61 aa1.22□□□□□ -2.21
SPTLC2-204ENST00000556264 KRTAP4-1Q9BYQ7 146 aa1.22□□□□□ -2.21
SPTLC2-204ENST00000556264 NEBP20929 6669 aa1.22□□□□□ -2.21
SPTLC2-204ENST00000556264 KMT2CQ8NEZ4 4911 aaKnown RBP1.21□□□□□ -2.22
SPTLC2-204ENST00000556264 AHNAK2Q8IVF2 5795 aa1.21□□□□□ -2.22
SPTLC2-204ENST00000556264 ABCA13Q86UQ4 5058 aa1.19□□□□□ -2.22
SPTLC2-204ENST00000556264 LRP2P98164 4655 aa1.17□□□□□ -2.22
SPTLC2-204ENST00000556264 KRTAP19-2Q3LHN2 52 aa1.17□□□□□ -2.22
SPTLC2-204ENST00000556264 AHNAKQ09666 5890 aaKnown RBP1.17□□□□□ -2.22
SPTLC2-204ENST00000556264 HERC1Q15751 4861 aa1.15□□□□□ -2.22
SPTLC2-204ENST00000556264 LPAP08519 4548 aa1.15□□□□□ -2.23
SPTLC2-204ENST00000556264 KRTAP21-2Q3LI59 83 aa1.14□□□□□ -2.23
SPTLC2-204ENST00000556264 SPRR2GQ9BYE4 73 aa1.14□□□□□ -2.23
SPTLC2-204ENST00000556264 MUC17Q685J3 4493 aa1.14□□□□□ -2.23
SPTLC2-204ENST00000556264 DSTQ03001 7570 aaKnown RBP1.14□□□□□ -2.23
SPTLC2-204ENST00000556264 MUC5BQ9HC84 5762 aaPredicted RBP1.13□□□□□ -2.23
SPTLC2-204ENST00000556264 HERC2O95714 4834 aa1.12□□□□□ -2.23
SPTLC2-204ENST00000556264 FLGP20930 4061 aaPredicted RBP1.11□□□□□ -2.23
SPTLC2-204ENST00000556264 MT1HP80294 61 aa1.11□□□□□ -2.23
SPTLC2-204ENST00000556264 SSPOA2VEC9 5147 aa1.1□□□□□ -2.23
SPTLC2-204ENST00000556264 FAT4Q6V0I7 4981 aa1.1□□□□□ -2.23
SPTLC2-204ENST00000556264 MT2AP02795 61 aa1.1□□□□□ -2.23
SPTLC2-204ENST00000556264 KRTAP20-1Q3LI63 56 aa1.1□□□□□ -2.23
SPTLC2-204ENST00000556264 RNF213Q63HN8 5207 aa1.1□□□□□ -2.23
SPTLC2-204ENST00000556264 MT1FP04733 61 aa1.09□□□□□ -2.23
SPTLC2-204ENST00000556264 KRTAP19-8Q3LI54 63 aa1.09□□□□□ -2.23
SPTLC2-204ENST00000556264 KRTAP8-1Q8IUC2 63 aa1.09□□□□□ -2.23
SPTLC2-204ENST00000556264 HMCN2Q8NDA2 5059 aa1.08□□□□□ -2.24
SPTLC2-204ENST00000556264 MT1XP80297 61 aa1.06□□□□□ -2.24
SPTLC2-204ENST00000556264 MT1BP07438 61 aa1.05□□□□□ -2.24
SPTLC2-204ENST00000556264 KRTAP19-5Q3LI72 72 aa1.02□□□□□ -2.25
SPTLC2-204ENST00000556264 MDN1Q9NU22 5596 aa0.96□□□□□ -2.26
SPTLC2-204ENST00000556264 FCGBPQ9Y6R7 5405 aaPredicted RBP0.94□□□□□ -2.26
SPTLC2-204ENST00000556264 KMT2DO14686 5537 aa0.94□□□□□ -2.26
SPTLC2-204ENST00000556264 KRTAP19-7Q3SYF9 63 aa0.93□□□□□ -2.26
SPTLC2-204ENST00000556264 MT1LQ93083 61 aa0.93□□□□□ -2.26
SPTLC2-204ENST00000556264 USH2AO75445 5202 aa0.93□□□□□ -2.26
SPTLC2-204ENST00000556264 MUC5ACP98088 5654 aa0.92□□□□□ -2.26
SPTLC2-204ENST00000556264 MT1EP04732 61 aa0.92□□□□□ -2.26
SPTLC2-204ENST00000556264 KRTAP2-3P0C7H8 128 aa0.92□□□□□ -2.26
SPTLC2-204ENST00000556264 KRTAP2-4Q9BYR9 128 aa0.92□□□□□ -2.26
SPTLC2-204ENST00000556264 KRTAP2-1Q9BYU5 128 aa0.92□□□□□ -2.26
SPTLC2-204ENST00000556264 KRTAP5-10Q6L8G5 202 aa0.9□□□□□ -2.27
SPTLC2-204ENST00000556264 KRTAP19-6Q3LI70 58 aa0.89□□□□□ -2.27
SPTLC2-204ENST00000556264 MT1GP13640 62 aa0.88□□□□□ -2.27
SPTLC2-204ENST00000556264 KRTAP19-3Q7Z4W3 81 aa0.87□□□□□ -2.27
SPTLC2-204ENST00000556264 MT1MQ8N339 61 aa0.87□□□□□ -2.27
SPTLC2-204ENST00000556264 SPRR2FQ96RM1 72 aa0.85□□□□□ -2.27
SPTLC2-204ENST00000556264 MUC12Q9UKN1 5478 aa0.83□□□□□ -2.28
SPTLC2-204ENST00000556264 MT1AP04731 61 aa0.82□□□□□ -2.28
SPTLC2-204ENST00000556264 SPRR2EP22531 72 aa0.78□□□□□ -2.28
SPTLC2-204ENST00000556264 SPRR2BP35325 72 aa0.78□□□□□ -2.28
SPTLC2-204ENST00000556264 SPRR2AP35326 72 aa0.78□□□□□ -2.28
SPTLC2-204ENST00000556264 KRTAP6-1Q3LI64 71 aa0.78□□□□□ -2.28
SPTLC2-204ENST00000556264 PRM1P04553 51 aa0.75□□□□□ -2.29
SPTLC2-204ENST00000556264 SPRR2DP22532 72 aa0.75□□□□□ -2.29
SPTLC2-204ENST00000556264 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
SPTLC2-204ENST00000556264 KRTAP6-2Q3LI66 62 aa0.72□□□□□ -2.29
SPTLC2-204ENST00000556264 SYNE1Q8NF91 8797 aaKnown RBP0.68□□□□□ -2.3
SPTLC2-204ENST00000556264 MT4P47944 62 aa0.65□□□□□ -2.31
SPTLC2-204ENST00000556264 KRTAP20-2Q3LI61 65 aa0.61□□□□□ -2.31
SPTLC2-204ENST00000556264 PHGR1C9JFL3 82 aa0.56□□□□□ -2.32
SPTLC2-204ENST00000556264 KRTAP21-1Q3LI58 79 aa0.56□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 73.8 ms