RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 MT1XP80297 61 aa2.84□□□□□ -1.95
ATXN3-236ENST00000556220 CRIPTQ9P021 101 aa2.84□□□□□ -1.95
ATXN3-236ENST00000556220 PSPHP1O15172 72 aa2.83□□□□□ -1.96
ATXN3-236ENST00000556220 LCE1CQ5T751 118 aa2.83□□□□□ -1.96
ATXN3-236ENST00000556220 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
ATXN3-236ENST00000556220 COA5Q86WW8 74 aa2.83□□□□□ -1.96
ATXN3-236ENST00000556220 NDUFC1O43677 76 aa2.82□□□□□ -1.96
ATXN3-236ENST00000556220 LCA10Q71F78 164 aa2.82□□□□□ -1.96
ATXN3-236ENST00000556220 S4R3F8 94 aa2.82□□□□□ -1.96
ATXN3-236ENST00000556220 PRO0628Q9UI54 55 aa2.81□□□□□ -1.96
ATXN3-236ENST00000556220 SERP1Q9Y6X1 66 aa2.79□□□□□ -1.96
ATXN3-236ENST00000556220 ATP5EP56381 51 aaPredicted RBP2.76□□□□□ -1.97
ATXN3-236ENST00000556220 RPS28P62857 69 aaKnown RBP2.76□□□□□ -1.97
ATXN3-236ENST00000556220 KRTAP5-10Q6L8G5 202 aa2.75□□□□□ -1.97
ATXN3-236ENST00000556220 KRTAP13-4Q3LI77 160 aa2.74□□□□□ -1.97
ATXN3-236ENST00000556220 PLAC4Q8WY50 150 aa2.74□□□□□ -1.97
ATXN3-236ENST00000556220 P0C880 135 aa2.73□□□□□ -1.97
ATXN3-236ENST00000556220 A8MUN3 132 aa2.72□□□□□ -1.97
ATXN3-236ENST00000556220 ACYP2P14621 99 aa2.72□□□□□ -1.97
ATXN3-236ENST00000556220 KRTAP5-7Q6L8G8 165 aa2.7□□□□□ -1.98
ATXN3-236ENST00000556220 LINC01558Q9Y6Z2 57 aa2.7□□□□□ -1.98
ATXN3-236ENST00000556220 Q1T7F1 81 aa2.69□□□□□ -1.98
ATXN3-236ENST00000556220 MT4P47944 62 aa2.68□□□□□ -1.98
ATXN3-236ENST00000556220 LUZP6Q538Z0 58 aa2.68□□□□□ -1.98
ATXN3-236ENST00000556220 H0YAA0 97 aa2.67□□□□□ -1.98
ATXN3-236ENST00000556220 K7ERS5 55 aa2.65□□□□□ -1.99
ATXN3-236ENST00000556220 ADM2Q7Z4H4 148 aa2.63□□□□□ -1.99
ATXN3-236ENST00000556220 PRR15LQ9BU68 103 aa2.63□□□□□ -1.99
ATXN3-236ENST00000556220 CHKB-CPT1BH3BT56 60 aa2.62□□□□□ -1.99
ATXN3-236ENST00000556220 SPRR5A0A1B0GTR4 108 aa2.61□□□□□ -1.99
ATXN3-236ENST00000556220 SPATA8Q6RVD6 105 aa2.61□□□□□ -1.99
ATXN3-236ENST00000556220 KRTAP19-3Q7Z4W3 81 aa2.6□□□□□ -1.99
ATXN3-236ENST00000556220 R4GN34 69 aa2.58□□□□□ -2
ATXN3-236ENST00000556220 A0A1B0GU69 56 aa2.56□□□□□ -2
ATXN3-236ENST00000556220 KRTAP19-7Q3SYF9 63 aa2.56□□□□□ -2
ATXN3-236ENST00000556220 MT1EP04732 61 aa2.55□□□□□ -2
ATXN3-236ENST00000556220 KRTAP12-1P59990 96 aa2.55□□□□□ -2
ATXN3-236ENST00000556220 PP632Q6XCG6 107 aa2.55□□□□□ -2
ATXN3-236ENST00000556220 A6NED7 52 aa2.54□□□□□ -2
ATXN3-236ENST00000556220 M0QZ58 72 aa2.54□□□□□ -2
ATXN3-236ENST00000556220 KRTAP5-8O75690 187 aa2.54□□□□□ -2
ATXN3-236ENST00000556220 A0A1B0GU33 70 aa2.53□□□□□ -2
ATXN3-236ENST00000556220 SPINT4Q6UDR6 99 aa2.53□□□□□ -2
ATXN3-236ENST00000556220 LINC01554Q52M75 96 aa2.52□□□□□ -2.01
ATXN3-236ENST00000556220 LCE3DQ9BYE3 92 aa2.52□□□□□ -2.01
ATXN3-236ENST00000556220 SPTSSBQ8NFR3 76 aa2.51□□□□□ -2.01
ATXN3-236ENST00000556220 MT1GP13640 62 aa2.5□□□□□ -2.01
ATXN3-236ENST00000556220 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
ATXN3-236ENST00000556220 A0A0D9SG42 100 aa2.49□□□□□ -2.01
ATXN3-236ENST00000556220 CDC42SE1Q9NRR8 79 aa2.48□□□□□ -2.01
ATXN3-236ENST00000556220 MIR22HGQ0VDD5 57 aa2.47□□□□□ -2.01
ATXN3-236ENST00000556220 MUC5BQ9HC84 5762 aaPredicted RBP2.47□□□□□ -2.01
ATXN3-236ENST00000556220 UQCR11O14957 56 aa2.45□□□□□ -2.02
ATXN3-236ENST00000556220 C10orf95Q9H7T3 257 aa2.45□□□□□ -2.02
ATXN3-236ENST00000556220 MT1MQ8N339 61 aa2.44□□□□□ -2.02
ATXN3-236ENST00000556220 BRK1Q8WUW1 75 aa2.44□□□□□ -2.02
ATXN3-236ENST00000556220 PMAIP1Q13794 54 aa2.43□□□□□ -2.02
ATXN3-236ENST00000556220 KRTAP20-2Q3LI61 65 aa2.42□□□□□ -2.02
ATXN3-236ENST00000556220 KRTAP19-5Q3LI72 72 aa2.39□□□□□ -2.03
ATXN3-236ENST00000556220 MUC5ACP98088 5654 aa2.39□□□□□ -2.03
ATXN3-236ENST00000556220 MT1LQ93083 61 aa2.37□□□□□ -2.03
ATXN3-236ENST00000556220 KRTAP25-1Q3LHN0 102 aa2.36□□□□□ -2.03
ATXN3-236ENST00000556220 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.04
ATXN3-236ENST00000556220 SYNE1Q8NF91 8797 aaKnown RBP2.33□□□□□ -2.04
ATXN3-236ENST00000556220 KRTAP12-4P60329 112 aa2.32□□□□□ -2.04
ATXN3-236ENST00000556220 ROMO1P60602 79 aa2.27□□□□□ -2.05
ATXN3-236ENST00000556220 KTN1-AS1Q86SY8 53 aa2.2□□□□□ -2.06
ATXN3-236ENST00000556220 TNP1P09430 55 aa2.15□□□□□ -2.07
ATXN3-236ENST00000556220 KRTAP12-3P60328 96 aa2.09□□□□□ -2.07
ATXN3-236ENST00000556220 KRTAP6-1Q3LI64 71 aa2.02□□□□□ -2.09
ATXN3-236ENST00000556220 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
ATXN3-236ENST00000556220 MT1AP04731 61 aa2□□□□□ -2.09
ATXN3-236ENST00000556220 KRTAP6-2Q3LI66 62 aa2□□□□□ -2.09
ATXN3-236ENST00000556220 INE1O15225 51 aa1.71□□□□□ -2.14
ATXN3-236ENST00000556220 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
ATXN3-236ENST00000556220 PRM1P04553 51 aa1.24□□□□□ -2.21
ATXN3-236ENST00000556220 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
ATXN3-236ENST00000556220 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 74.4 ms