RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 KRTAP4-3Q9BYR4 195 aa6.85□□□□□ -1.31
PRKCH-219ENST00000555906 KRTAP4-6Q9BYQ5 205 aa6.73□□□□□ -1.33
PRKCH-219ENST00000555906 KRTAP5-10Q6L8G5 202 aa6.72□□□□□ -1.33
PRKCH-219ENST00000555906 KRTAP12-3P60328 96 aa6.63□□□□□ -1.35
PRKCH-219ENST00000555906 PRR15LQ9BU68 103 aa6.62□□□□□ -1.35
PRKCH-219ENST00000555906 KRTAP4-7Q9BYR0 210 aa6.61□□□□□ -1.35
PRKCH-219ENST00000555906 ANAPC13Q9BS18 74 aa6.55□□□□□ -1.36
PRKCH-219ENST00000555906 ATP5EP56381 51 aaPredicted RBP6.51□□□□□ -1.37
PRKCH-219ENST00000555906 KRTAP5-5Q701N2 237 aaPredicted RBP6.51□□□□□ -1.37
PRKCH-219ENST00000555906 KRTAP5-7Q6L8G8 165 aa6.5□□□□□ -1.37
PRKCH-219ENST00000555906 KRTAP5-3Q6L8H2 238 aa6.5□□□□□ -1.37
PRKCH-219ENST00000555906 KRTAP20-2Q3LI61 65 aa6.49□□□□□ -1.37
PRKCH-219ENST00000555906 LINC01558Q9Y6Z2 57 aa6.48□□□□□ -1.37
PRKCH-219ENST00000555906 SPRR5A0A1B0GTR4 108 aa6.44□□□□□ -1.38
PRKCH-219ENST00000555906 CCDC179H3BU77 68 aa6.43□□□□□ -1.38
PRKCH-219ENST00000555906 UQCR11O14957 56 aa6.38□□□□□ -1.39
PRKCH-219ENST00000555906 KRTAP12-4P60329 112 aa6.36□□□□□ -1.39
PRKCH-219ENST00000555906 KRTAP25-1Q3LHN0 102 aa6.35□□□□□ -1.39
PRKCH-219ENST00000555906 LOC100996750A0A140TA64 210 aa6.28□□□□□ -1.4
PRKCH-219ENST00000555906 KRTAP19-4Q3LI73 84 aa6.26□□□□□ -1.41
PRKCH-219ENST00000555906 SYNE1Q8NF91 8797 aaKnown RBP6.24□□□□□ -1.41
PRKCH-219ENST00000555906 TMEM258P61165 79 aa6.21□□□□□ -1.42
PRKCH-219ENST00000555906 MIR22HGQ0VDD5 57 aa6.2□□□□□ -1.42
PRKCH-219ENST00000555906 K7ERS5 55 aa6.15□□□□□ -1.42
PRKCH-219ENST00000555906 KRTAP23-1A1A580 65 aa6.11□□□□□ -1.43
PRKCH-219ENST00000555906 KRTAP15-1Q3LI76 137 aa6.1□□□□□ -1.43
PRKCH-219ENST00000555906 LCE3CQ5T5A8 94 aa6.07□□□□□ -1.44
PRKCH-219ENST00000555906 KRTAP5-2Q701N4 177 aa5.99□□□□□ -1.45
PRKCH-219ENST00000555906 MT1AP04731 61 aa5.97□□□□□ -1.45
PRKCH-219ENST00000555906 KRTAP4-11Q9BYQ6 195 aa5.97□□□□□ -1.45
PRKCH-219ENST00000555906 KRTAP6-1Q3LI64 71 aa5.93□□□□□ -1.46
PRKCH-219ENST00000555906 PSPHP1O15172 72 aa5.92□□□□□ -1.46
PRKCH-219ENST00000555906 V9GYY9 64 aa5.92□□□□□ -1.46
PRKCH-219ENST00000555906 Q1T7F1 81 aa5.85□□□□□ -1.47
PRKCH-219ENST00000555906 CDC42SE1Q9NRR8 79 aa5.79□□□□□ -1.48
PRKCH-219ENST00000555906 KRTAP5-8O75690 187 aa5.78□□□□□ -1.48
PRKCH-219ENST00000555906 KRTAP9-4Q9BYQ2 154 aa5.77□□□□□ -1.49
PRKCH-219ENST00000555906 KRTAP9-6A8MVA2 160 aa5.73□□□□□ -1.49
PRKCH-219ENST00000555906 A6NED7 52 aa5.72□□□□□ -1.49
PRKCH-219ENST00000555906 KRTAP6-2Q3LI66 62 aa5.71□□□□□ -1.5
PRKCH-219ENST00000555906 RPS28P62857 69 aaKnown RBP5.7□□□□□ -1.5
PRKCH-219ENST00000555906 MUC5ACP98088 5654 aa5.69□□□□□ -1.5
PRKCH-219ENST00000555906 MUC5BQ9HC84 5762 aaPredicted RBP5.68□□□□□ -1.5
PRKCH-219ENST00000555906 AHNAKQ09666 5890 aaKnown RBP5.68□□□□□ -1.5
PRKCH-219ENST00000555906 ROMO1P60602 79 aa5.67□□□□□ -1.5
PRKCH-219ENST00000555906 OBSCNQ5VST9 7968 aa5.63□□□□□ -1.51
PRKCH-219ENST00000555906 KRTAP9-9Q9BYP9 154 aa5.52□□□□□ -1.53
PRKCH-219ENST00000555906 MT3P25713 68 aa5.46□□□□□ -1.54
PRKCH-219ENST00000555906 KRTAP5-1Q6L8H4 278 aa5.4□□□□□ -1.54
PRKCH-219ENST00000555906 SVIPQ8NHG7 77 aa5.32□□□□□ -1.56
PRKCH-219ENST00000555906 LCE1EQ5T753 118 aa5.09□□□□□ -1.59
PRKCH-219ENST00000555906 PCP4P48539 62 aa4.85□□□□□ -1.63
PRKCH-219ENST00000555906 KRTAP4-2Q9BYR5 136 aa4.83□□□□□ -1.64
PRKCH-219ENST00000555906 LCE1BQ5T7P3 118 aa4.77□□□□□ -1.65
PRKCH-219ENST00000555906 LCE1CQ5T751 118 aa4.72□□□□□ -1.65
PRKCH-219ENST00000555906 BRK1Q8WUW1 75 aa4.57□□□□□ -1.68
PRKCH-219ENST00000555906 KRTAP4-12Q9BQ66 201 aa4.4□□□□□ -1.71
PRKCH-219ENST00000555906 KRTAP5-11Q6L8G4 156 aa4.32□□□□□ -1.72
PRKCH-219ENST00000555906 LCE3DQ9BYE3 92 aa4.32□□□□□ -1.72
PRKCH-219ENST00000555906 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.29□□□□□ -1.72
PRKCH-219ENST00000555906 PMAIP1Q13794 54 aa4.25□□□□□ -1.73
PRKCH-219ENST00000555906 LCE1FQ5T754 118 aa4.25□□□□□ -1.73
PRKCH-219ENST00000555906 PRAC1Q96KF2 57 aa4.19□□□□□ -1.74
PRKCH-219ENST00000555906 LCE3EQ5T5B0 92 aa4.02□□□□□ -1.77
PRKCH-219ENST00000555906 KRTAP21-2Q3LI59 83 aa3.92□□□□□ -1.78
PRKCH-219ENST00000555906 PHGR1C9JFL3 82 aa3.91□□□□□ -1.78
PRKCH-219ENST00000555906 A0A0A0MQY5 61 aa3.72□□□□□ -1.81
PRKCH-219ENST00000555906 H3BS24 57 aa3.69□□□□□ -1.82
PRKCH-219ENST00000555906 PRO0628Q9UI54 55 aa3.69□□□□□ -1.82
PRKCH-219ENST00000555906 KTN1-AS1Q86SY8 53 aa3.62□□□□□ -1.83
PRKCH-219ENST00000555906 LUZP6Q538Z0 58 aa3.61□□□□□ -1.83
PRKCH-219ENST00000555906 KRTAP4-4Q9BYR3 166 aa3.58□□□□□ -1.84
PRKCH-219ENST00000555906 MUC19Q7Z5P9 8384 aa3.47□□□□□ -1.85
PRKCH-219ENST00000555906 KRTAP21-1Q3LI58 79 aa2.99□□□□□ -1.93
PRKCH-219ENST00000555906 PRM1P04553 51 aa2.88□□□□□ -1.95
PRKCH-219ENST00000555906 NDUFAF8A1L188 74 aa2.68□□□□□ -1.98
PRKCH-219ENST00000555906 MUC16Q8WXI7 14507 aa2.47□□□□□ -2.01
PRKCH-219ENST00000555906 INE1O15225 51 aa2.39□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 11.8 ms