RNA–Protein interactions for RNA: ENST00000555780.1

PCNX1-210, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 384 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-210ENST00000555780 A0A1B0GU69 56 aa2.58□□□□□ -2
PCNX1-210ENST00000555780 KRTAP20-1Q3LI63 56 aa2.58□□□□□ -2
PCNX1-210ENST00000555780 KRTAP19-7Q3SYF9 63 aa2.58□□□□□ -2
PCNX1-210ENST00000555780 SPINT4Q6UDR6 99 aa2.57□□□□□ -2
PCNX1-210ENST00000555780 CAMK2N1Q7Z7J9 78 aa2.57□□□□□ -2
PCNX1-210ENST00000555780 LINC01558Q9Y6Z2 57 aa2.57□□□□□ -2
PCNX1-210ENST00000555780 ATP5EP56381 51 aaPredicted RBP2.56□□□□□ -2
PCNX1-210ENST00000555780 TMEM258P61165 79 aa2.56□□□□□ -2
PCNX1-210ENST00000555780 KRTAP2-3P0C7H8 128 aa2.54□□□□□ -2
PCNX1-210ENST00000555780 KRTAP2-4Q9BYR9 128 aa2.54□□□□□ -2
PCNX1-210ENST00000555780 C10orf95Q9H7T3 257 aa2.54□□□□□ -2
PCNX1-210ENST00000555780 MT1EP04732 61 aa2.52□□□□□ -2.01
PCNX1-210ENST00000555780 SMIM26A0A096LP01 95 aa2.51□□□□□ -2.01
PCNX1-210ENST00000555780 SPRR2DP22532 72 aa2.51□□□□□ -2.01
PCNX1-210ENST00000555780 KRTAP19-5Q3LI72 72 aa2.49□□□□□ -2.01
PCNX1-210ENST00000555780 LCE3AQ5TA76 89 aa2.47□□□□□ -2.01
PCNX1-210ENST00000555780 KRTAP2-1Q9BYU5 128 aa2.47□□□□□ -2.01
PCNX1-210ENST00000555780 KRTAP19-3Q7Z4W3 81 aa2.46□□□□□ -2.02
PCNX1-210ENST00000555780 PRR15LQ9BU68 103 aa2.46□□□□□ -2.02
PCNX1-210ENST00000555780 DSTQ03001 7570 aaKnown RBP2.44□□□□□ -2.02
PCNX1-210ENST00000555780 UQCR11O14957 56 aa2.43□□□□□ -2.02
PCNX1-210ENST00000555780 Q1T7F1 81 aa2.43□□□□□ -2.02
PCNX1-210ENST00000555780 PSPHP1O15172 72 aa2.42□□□□□ -2.02
PCNX1-210ENST00000555780 MT1LQ93083 61 aa2.42□□□□□ -2.02
PCNX1-210ENST00000555780 TNP1P09430 55 aa2.4□□□□□ -2.03
PCNX1-210ENST00000555780 MIR22HGQ0VDD5 57 aa2.4□□□□□ -2.03
PCNX1-210ENST00000555780 MT1MQ8N339 61 aa2.4□□□□□ -2.03
PCNX1-210ENST00000555780 MT1GP13640 62 aa2.39□□□□□ -2.03
PCNX1-210ENST00000555780 PCP4P48539 62 aa2.39□□□□□ -2.03
PCNX1-210ENST00000555780 LCE1FQ5T754 118 aa2.37□□□□□ -2.03
PCNX1-210ENST00000555780 V9GYY9 64 aa2.35□□□□□ -2.03
PCNX1-210ENST00000555780 RPS28P62857 69 aaKnown RBP2.34□□□□□ -2.03
PCNX1-210ENST00000555780 KRTAP5-8O75690 187 aa2.33□□□□□ -2.04
PCNX1-210ENST00000555780 KRTAP12-3P60328 96 aa2.33□□□□□ -2.04
PCNX1-210ENST00000555780 LCE3CQ5T5A8 94 aa2.32□□□□□ -2.04
PCNX1-210ENST00000555780 KRTAP25-1Q3LHN0 102 aa2.3□□□□□ -2.04
PCNX1-210ENST00000555780 A6NED7 52 aa2.29□□□□□ -2.04
PCNX1-210ENST00000555780 PP632Q6XCG6 107 aa2.29□□□□□ -2.04
PCNX1-210ENST00000555780 HMCN1Q96RW7 5635 aa2.25□□□□□ -2.05
PCNX1-210ENST00000555780 SYNE1Q8NF91 8797 aaKnown RBP2.23□□□□□ -2.05
PCNX1-210ENST00000555780 K7ERS5 55 aa2.23□□□□□ -2.05
PCNX1-210ENST00000555780 KRTAP5-5Q701N2 237 aaPredicted RBP2.22□□□□□ -2.05
PCNX1-210ENST00000555780 CDC42SE1Q9NRR8 79 aa2.22□□□□□ -2.05
PCNX1-210ENST00000555780 MT4P47944 62 aa2.21□□□□□ -2.06
PCNX1-210ENST00000555780 GPR98Q8WXG9 6306 aa2.21□□□□□ -2.06
PCNX1-210ENST00000555780 ROMO1P60602 79 aa2.2□□□□□ -2.06
PCNX1-210ENST00000555780 AHNAK2Q8IVF2 5795 aa2.15□□□□□ -2.07
PCNX1-210ENST00000555780 LCE1CQ5T751 118 aa2.13□□□□□ -2.07
PCNX1-210ENST00000555780 LCE1BQ5T7P3 118 aa2.13□□□□□ -2.07
PCNX1-210ENST00000555780 LCE3EQ5T5B0 92 aa2.12□□□□□ -2.07
PCNX1-210ENST00000555780 KRTAP20-2Q3LI61 65 aa2.11□□□□□ -2.07
PCNX1-210ENST00000555780 SPRR5A0A1B0GTR4 108 aa2.07□□□□□ -2.08
PCNX1-210ENST00000555780 KRTAP6-1Q3LI64 71 aa2.07□□□□□ -2.08
PCNX1-210ENST00000555780 KRTAP5-10Q6L8G5 202 aa2.07□□□□□ -2.08
PCNX1-210ENST00000555780 MT1AP04731 61 aa2.04□□□□□ -2.08
PCNX1-210ENST00000555780 BRK1Q8WUW1 75 aa2.03□□□□□ -2.08
PCNX1-210ENST00000555780 KRTAP12-4P60329 112 aa2.02□□□□□ -2.09
PCNX1-210ENST00000555780 KRTAP5-7Q6L8G8 165 aa1.95□□□□□ -2.1
PCNX1-210ENST00000555780 KRTAP6-2Q3LI66 62 aa1.94□□□□□ -2.1
PCNX1-210ENST00000555780 PRAC1Q96KF2 57 aa1.91□□□□□ -2.1
PCNX1-210ENST00000555780 PMAIP1Q13794 54 aa1.9□□□□□ -2.11
PCNX1-210ENST00000555780 MUC5ACP98088 5654 aa1.8□□□□□ -2.12
PCNX1-210ENST00000555780 PRO0628Q9UI54 55 aa1.8□□□□□ -2.12
PCNX1-210ENST00000555780 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
PCNX1-210ENST00000555780 MUC5BQ9HC84 5762 aaPredicted RBP1.76□□□□□ -2.13
PCNX1-210ENST00000555780 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
PCNX1-210ENST00000555780 KTN1-AS1Q86SY8 53 aa1.72□□□□□ -2.13
PCNX1-210ENST00000555780 SVIPQ8NHG7 77 aa1.58□□□□□ -2.16
PCNX1-210ENST00000555780 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
PCNX1-210ENST00000555780 LCE3DQ9BYE3 92 aa1.55□□□□□ -2.16
PCNX1-210ENST00000555780 NDUFAF8A1L188 74 aa1.47□□□□□ -2.17
PCNX1-210ENST00000555780 LUZP6Q538Z0 58 aa1.43□□□□□ -2.18
PCNX1-210ENST00000555780 A0A0A0MQY5 61 aa1.24□□□□□ -2.21
PCNX1-210ENST00000555780 PHGR1C9JFL3 82 aa1.22□□□□□ -2.21
PCNX1-210ENST00000555780 PRM1P04553 51 aa1.16□□□□□ -2.22
PCNX1-210ENST00000555780 INE1O15225 51 aa0.97□□□□□ -2.25
PCNX1-210ENST00000555780 KRTAP21-1Q3LI58 79 aa0.85□□□□□ -2.27
PCNX1-210ENST00000555780 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 130.1 ms