RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 KRTAP12-4P60329 112 aa6.23□□□□□ -1.41
SUPT16H-203ENST00000555752 SYNE1Q8NF91 8797 aaKnown RBP6.15□□□□□ -1.42
SUPT16H-203ENST00000555752 A0A1B0GV90 55 aa6.15□□□□□ -1.42
SUPT16H-203ENST00000555752 J3QR89 54 aa6.13□□□□□ -1.43
SUPT16H-203ENST00000555752 SNURFQ9Y675 71 aa6.12□□□□□ -1.43
SUPT16H-203ENST00000555752 TNP1P09430 55 aa6.08□□□□□ -1.44
SUPT16H-203ENST00000555752 A0A1B0GU33 70 aa6.07□□□□□ -1.44
SUPT16H-203ENST00000555752 SERP1Q9Y6X1 66 aa6.07□□□□□ -1.44
SUPT16H-203ENST00000555752 SMIM20Q8N5G0 67 aa6.06□□□□□ -1.44
SUPT16H-203ENST00000555752 SEC61GP60059 68 aa6.05□□□□□ -1.44
SUPT16H-203ENST00000555752 KRTAP12-3P60328 96 aa6.05□□□□□ -1.44
SUPT16H-203ENST00000555752 SPANXA2-OT1Q8N9U9 137 aa6.04□□□□□ -1.44
SUPT16H-203ENST00000555752 AHNAKQ09666 5890 aaKnown RBP6.03□□□□□ -1.44
SUPT16H-203ENST00000555752 MUC5ACP98088 5654 aa6.03□□□□□ -1.44
SUPT16H-203ENST00000555752 COA5Q86WW8 74 aa5.98□□□□□ -1.45
SUPT16H-203ENST00000555752 A8MU10 97 aa5.95□□□□□ -1.46
SUPT16H-203ENST00000555752 KRTAP5-8O75690 187 aa5.93□□□□□ -1.46
SUPT16H-203ENST00000555752 MUC5BQ9HC84 5762 aaPredicted RBP5.92□□□□□ -1.46
SUPT16H-203ENST00000555752 KRTAP5-2Q701N4 177 aa5.88□□□□□ -1.47
SUPT16H-203ENST00000555752 SMIM26A0A096LP01 95 aa5.85□□□□□ -1.47
SUPT16H-203ENST00000555752 OBSCNQ5VST9 7968 aa5.81□□□□□ -1.48
SUPT16H-203ENST00000555752 SERP2Q8N6R1 65 aa5.76□□□□□ -1.49
SUPT16H-203ENST00000555752 K7ERU9 68 aa5.74□□□□□ -1.49
SUPT16H-203ENST00000555752 KRTAP6-1Q3LI64 71 aa5.71□□□□□ -1.5
SUPT16H-203ENST00000555752 A0A1B0GU69 56 aa5.67□□□□□ -1.5
SUPT16H-203ENST00000555752 MT1AP04731 61 aa5.65□□□□□ -1.5
SUPT16H-203ENST00000555752 KRTAP6-2Q3LI66 62 aa5.57□□□□□ -1.52
SUPT16H-203ENST00000555752 LCE3CQ5T5A8 94 aa5.52□□□□□ -1.53
SUPT16H-203ENST00000555752 H7BZZ5 65 aa5.5□□□□□ -1.53
SUPT16H-203ENST00000555752 COX7CP15954 63 aa5.48□□□□□ -1.53
SUPT16H-203ENST00000555752 KRTAP25-1Q3LHN0 102 aa5.47□□□□□ -1.53
SUPT16H-203ENST00000555752 KRTAP23-1A1A580 65 aa5.45□□□□□ -1.54
SUPT16H-203ENST00000555752 KRTAP15-1Q3LI76 137 aa5.43□□□□□ -1.54
SUPT16H-203ENST00000555752 KRTAP5-1Q6L8H4 278 aa5.41□□□□□ -1.54
SUPT16H-203ENST00000555752 KRTAP9-6A8MVA2 160 aa5.3□□□□□ -1.56
SUPT16H-203ENST00000555752 PRR15LQ9BU68 103 aa5.27□□□□□ -1.57
SUPT16H-203ENST00000555752 MT3P25713 68 aa5.17□□□□□ -1.58
SUPT16H-203ENST00000555752 LINC01558Q9Y6Z2 57 aa5.16□□□□□ -1.58
SUPT16H-203ENST00000555752 UQCR11O14957 56 aa5.09□□□□□ -1.59
SUPT16H-203ENST00000555752 ANAPC13Q9BS18 74 aa5.09□□□□□ -1.59
SUPT16H-203ENST00000555752 ATP5EP56381 51 aaPredicted RBP5.05□□□□□ -1.6
SUPT16H-203ENST00000555752 CCDC179H3BU77 68 aa5.04□□□□□ -1.6
SUPT16H-203ENST00000555752 MIR22HGQ0VDD5 57 aa4.96□□□□□ -1.62
SUPT16H-203ENST00000555752 K7ERS5 55 aa4.9□□□□□ -1.63
SUPT16H-203ENST00000555752 LCE1EQ5T753 118 aa4.88□□□□□ -1.63
SUPT16H-203ENST00000555752 TMEM258P61165 79 aa4.8□□□□□ -1.64
SUPT16H-203ENST00000555752 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.78□□□□□ -1.64
SUPT16H-203ENST00000555752 RPS28P62857 69 aaKnown RBP4.74□□□□□ -1.65
SUPT16H-203ENST00000555752 LCE1BQ5T7P3 118 aa4.74□□□□□ -1.65
SUPT16H-203ENST00000555752 PSPHP1O15172 72 aa4.69□□□□□ -1.66
SUPT16H-203ENST00000555752 KRTAP5-11Q6L8G4 156 aa4.62□□□□□ -1.67
SUPT16H-203ENST00000555752 CDC42SE1Q9NRR8 79 aa4.62□□□□□ -1.67
SUPT16H-203ENST00000555752 Q1T7F1 81 aa4.61□□□□□ -1.67
SUPT16H-203ENST00000555752 V9GYY9 64 aa4.59□□□□□ -1.67
SUPT16H-203ENST00000555752 SVIPQ8NHG7 77 aa4.57□□□□□ -1.68
SUPT16H-203ENST00000555752 LCE1CQ5T751 118 aa4.54□□□□□ -1.68
SUPT16H-203ENST00000555752 ROMO1P60602 79 aa4.53□□□□□ -1.68
SUPT16H-203ENST00000555752 A6NED7 52 aa4.49□□□□□ -1.69
SUPT16H-203ENST00000555752 PCP4P48539 62 aa4.48□□□□□ -1.69
SUPT16H-203ENST00000555752 A0A0A0MQY5 61 aa4.29□□□□□ -1.72
SUPT16H-203ENST00000555752 LCE1FQ5T754 118 aa4.17□□□□□ -1.74
SUPT16H-203ENST00000555752 PHGR1C9JFL3 82 aa4.14□□□□□ -1.75
SUPT16H-203ENST00000555752 KRTAP4-4Q9BYR3 166 aa3.98□□□□□ -1.77
SUPT16H-203ENST00000555752 LCE3DQ9BYE3 92 aa3.83□□□□□ -1.8
SUPT16H-203ENST00000555752 KRTAP21-2Q3LI59 83 aa3.76□□□□□ -1.81
SUPT16H-203ENST00000555752 MUC19Q7Z5P9 8384 aa3.59□□□□□ -1.84
SUPT16H-203ENST00000555752 PRAC1Q96KF2 57 aa3.58□□□□□ -1.84
SUPT16H-203ENST00000555752 NDUFAF8A1L188 74 aa3.57□□□□□ -1.84
SUPT16H-203ENST00000555752 LCE3EQ5T5B0 92 aa3.49□□□□□ -1.85
SUPT16H-203ENST00000555752 BRK1Q8WUW1 75 aa3.43□□□□□ -1.86
SUPT16H-203ENST00000555752 PMAIP1Q13794 54 aa3.18□□□□□ -1.9
SUPT16H-203ENST00000555752 KRTAP21-1Q3LI58 79 aa3.11□□□□□ -1.91
SUPT16H-203ENST00000555752 LUZP6Q538Z0 58 aa2.72□□□□□ -1.97
SUPT16H-203ENST00000555752 KTN1-AS1Q86SY8 53 aa2.58□□□□□ -2
SUPT16H-203ENST00000555752 PRO0628Q9UI54 55 aa2.55□□□□□ -2
SUPT16H-203ENST00000555752 MUC16Q8WXI7 14507 aa2.45□□□□□ -2.02
SUPT16H-203ENST00000555752 PRM1P04553 51 aa2.31□□□□□ -2.04
SUPT16H-203ENST00000555752 INE1O15225 51 aa1.28□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms