RNA–Protein interactions for RNA: ENST00000555677.5

IFT43-211, Transcript of intraflagellar transport 43, humanhuman

TSL 4

Gene IFT43, Length 487 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-211ENST00000555677 KRTAP4-9Q9BYQ8 210 aa5.28□□□□□ -1.56
IFT43-211ENST00000555677 MIR22HGQ0VDD5 57 aa5.27□□□□□ -1.57
IFT43-211ENST00000555677 KRTAP4-3Q9BYR4 195 aa5.23□□□□□ -1.57
IFT43-211ENST00000555677 KRTAP12-3P60328 96 aa5.2□□□□□ -1.58
IFT43-211ENST00000555677 PSPHP1O15172 72 aa5.19□□□□□ -1.58
IFT43-211ENST00000555677 V9GYY9 64 aa5.19□□□□□ -1.58
IFT43-211ENST00000555677 Q1T7F1 81 aa5.18□□□□□ -1.58
IFT43-211ENST00000555677 LCE1DQ5T752 114 aa5.15□□□□□ -1.59
IFT43-211ENST00000555677 KRTAP25-1Q3LHN0 102 aa5.14□□□□□ -1.59
IFT43-211ENST00000555677 LCE4AQ5TA78 99 aa5.14□□□□□ -1.59
IFT43-211ENST00000555677 KRTAP4-7Q9BYR0 210 aa5.14□□□□□ -1.59
IFT43-211ENST00000555677 K7ERS5 55 aa5.13□□□□□ -1.59
IFT43-211ENST00000555677 MT4P47944 62 aa5.09□□□□□ -1.59
IFT43-211ENST00000555677 KRTAP5-4Q6L8H1 288 aa5.07□□□□□ -1.6
IFT43-211ENST00000555677 A6NED7 52 aa5□□□□□ -1.61
IFT43-211ENST00000555677 KRTAP23-1A1A580 65 aa4.97□□□□□ -1.61
IFT43-211ENST00000555677 KRTAP4-6Q9BYQ5 205 aa4.97□□□□□ -1.61
IFT43-211ENST00000555677 HMCN1Q96RW7 5635 aa4.93□□□□□ -1.62
IFT43-211ENST00000555677 RPS28P62857 69 aaKnown RBP4.92□□□□□ -1.62
IFT43-211ENST00000555677 KRTAP19-4Q3LI73 84 aa4.91□□□□□ -1.62
IFT43-211ENST00000555677 KRTAP5-5Q701N2 237 aaPredicted RBP4.9□□□□□ -1.63
IFT43-211ENST00000555677 KRTAP15-1Q3LI76 137 aa4.88□□□□□ -1.63
IFT43-211ENST00000555677 CDC42SE1Q9NRR8 79 aa4.87□□□□□ -1.63
IFT43-211ENST00000555677 LOC100996750A0A140TA64 210 aa4.86□□□□□ -1.63
IFT43-211ENST00000555677 PCP4P48539 62 aa4.86□□□□□ -1.63
IFT43-211ENST00000555677 ROMO1P60602 79 aa4.81□□□□□ -1.64
IFT43-211ENST00000555677 LCE3CQ5T5A8 94 aa4.81□□□□□ -1.64
IFT43-211ENST00000555677 AHNAK2Q8IVF2 5795 aa4.81□□□□□ -1.64
IFT43-211ENST00000555677 KRTAP20-2Q3LI61 65 aa4.77□□□□□ -1.65
IFT43-211ENST00000555677 KRTAP5-10Q6L8G5 202 aa4.76□□□□□ -1.65
IFT43-211ENST00000555677 SPRR5A0A1B0GTR4 108 aa4.75□□□□□ -1.65
IFT43-211ENST00000555677 KRTAP12-4P60329 112 aa4.74□□□□□ -1.65
IFT43-211ENST00000555677 KRTAP5-3Q6L8H2 238 aa4.66□□□□□ -1.66
IFT43-211ENST00000555677 SYNE1Q8NF91 8797 aaKnown RBP4.64□□□□□ -1.67
IFT43-211ENST00000555677 KRTAP5-7Q6L8G8 165 aa4.59□□□□□ -1.67
IFT43-211ENST00000555677 KRTAP9-6A8MVA2 160 aa4.55□□□□□ -1.68
IFT43-211ENST00000555677 MT1AP04731 61 aa4.55□□□□□ -1.68
IFT43-211ENST00000555677 KRTAP6-1Q3LI64 71 aa4.55□□□□□ -1.68
IFT43-211ENST00000555677 KRTAP5-2Q701N4 177 aa4.44□□□□□ -1.7
IFT43-211ENST00000555677 KRTAP9-4Q9BYQ2 154 aa4.43□□□□□ -1.7
IFT43-211ENST00000555677 KRTAP4-11Q9BYQ6 195 aa4.35□□□□□ -1.71
IFT43-211ENST00000555677 KRTAP6-2Q3LI66 62 aa4.33□□□□□ -1.72
IFT43-211ENST00000555677 BRK1Q8WUW1 75 aa4.3□□□□□ -1.72
IFT43-211ENST00000555677 AHNAKQ09666 5890 aaKnown RBP4.28□□□□□ -1.72
IFT43-211ENST00000555677 KRTAP5-8O75690 187 aa4.21□□□□□ -1.74
IFT43-211ENST00000555677 OBSCNQ5VST9 7968 aa4.19□□□□□ -1.74
IFT43-211ENST00000555677 MT3P25713 68 aa4.17□□□□□ -1.74
IFT43-211ENST00000555677 MUC5ACP98088 5654 aa4.13□□□□□ -1.75
IFT43-211ENST00000555677 MUC5BQ9HC84 5762 aaPredicted RBP4.09□□□□□ -1.75
IFT43-211ENST00000555677 PMAIP1Q13794 54 aa4.05□□□□□ -1.76
IFT43-211ENST00000555677 KRTAP5-1Q6L8H4 278 aa3.99□□□□□ -1.77
IFT43-211ENST00000555677 KRTAP9-9Q9BYP9 154 aa3.97□□□□□ -1.77
IFT43-211ENST00000555677 PRAC1Q96KF2 57 aa3.9□□□□□ -1.79
IFT43-211ENST00000555677 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
IFT43-211ENST00000555677 PRO0628Q9UI54 55 aa3.71□□□□□ -1.82
IFT43-211ENST00000555677 KRTAP4-2Q9BYR5 136 aa3.61□□□□□ -1.83
IFT43-211ENST00000555677 LCE1BQ5T7P3 118 aa3.59□□□□□ -1.83
IFT43-211ENST00000555677 LCE1CQ5T751 118 aa3.56□□□□□ -1.84
IFT43-211ENST00000555677 KTN1-AS1Q86SY8 53 aa3.56□□□□□ -1.84
IFT43-211ENST00000555677 LCE3DQ9BYE3 92 aa3.47□□□□□ -1.85
IFT43-211ENST00000555677 SVIPQ8NHG7 77 aa3.41□□□□□ -1.86
IFT43-211ENST00000555677 LUZP6Q538Z0 58 aa3.27□□□□□ -1.89
IFT43-211ENST00000555677 LCE3EQ5T5B0 92 aa3.27□□□□□ -1.89
IFT43-211ENST00000555677 KRTAP4-12Q9BQ66 201 aa3.27□□□□□ -1.89
IFT43-211ENST00000555677 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.24□□□□□ -1.89
IFT43-211ENST00000555677 KRTAP5-11Q6L8G4 156 aa3.2□□□□□ -1.9
IFT43-211ENST00000555677 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
IFT43-211ENST00000555677 KRTAP21-2Q3LI59 83 aa3□□□□□ -1.93
IFT43-211ENST00000555677 PHGR1C9JFL3 82 aa2.77□□□□□ -1.97
IFT43-211ENST00000555677 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
IFT43-211ENST00000555677 H3BS24 57 aa2.71□□□□□ -1.98
IFT43-211ENST00000555677 NDUFAF8A1L188 74 aa2.61□□□□□ -1.99
IFT43-211ENST00000555677 MUC19Q7Z5P9 8384 aa2.54□□□□□ -2
IFT43-211ENST00000555677 PRM1P04553 51 aa2.47□□□□□ -2.01
IFT43-211ENST00000555677 A0A0A0MQY5 61 aa2.23□□□□□ -2.05
IFT43-211ENST00000555677 INE1O15225 51 aa2.15□□□□□ -2.07
IFT43-211ENST00000555677 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.07
IFT43-211ENST00000555677 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 29.7 ms