RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 MT1MQ8N339 61 aa4.73□□□□□ -1.65
TUBB3-207ENST00000554927 PRR15LQ9BU68 103 aa4.71□□□□□ -1.66
TUBB3-207ENST00000554927 A8MU10 97 aa4.7□□□□□ -1.66
TUBB3-207ENST00000554927 TNP1P09430 55 aa4.7□□□□□ -1.66
TUBB3-207ENST00000554927 KRTAP4-3Q9BYR4 195 aa4.66□□□□□ -1.66
TUBB3-207ENST00000554927 ATP5EP56381 51 aaPredicted RBP4.63□□□□□ -1.67
TUBB3-207ENST00000554927 MT1LQ93083 61 aa4.63□□□□□ -1.67
TUBB3-207ENST00000554927 LCE3AQ5TA76 89 aa4.61□□□□□ -1.67
TUBB3-207ENST00000554927 C10orf95Q9H7T3 257 aa4.61□□□□□ -1.67
TUBB3-207ENST00000554927 CCDC179H3BU77 68 aa4.58□□□□□ -1.68
TUBB3-207ENST00000554927 KRTAP20-2Q3LI61 65 aa4.56□□□□□ -1.68
TUBB3-207ENST00000554927 LINC01558Q9Y6Z2 57 aa4.56□□□□□ -1.68
TUBB3-207ENST00000554927 UQCR11O14957 56 aa4.52□□□□□ -1.69
TUBB3-207ENST00000554927 PCP4P48539 62 aa4.5□□□□□ -1.69
TUBB3-207ENST00000554927 KRTAP12-3P60328 96 aa4.47□□□□□ -1.69
TUBB3-207ENST00000554927 TMEM258P61165 79 aa4.45□□□□□ -1.7
TUBB3-207ENST00000554927 K7ERS5 55 aa4.42□□□□□ -1.7
TUBB3-207ENST00000554927 KRTAP12-4P60329 112 aa4.42□□□□□ -1.7
TUBB3-207ENST00000554927 KRTAP4-7Q9BYR0 210 aa4.4□□□□□ -1.71
TUBB3-207ENST00000554927 MIR22HGQ0VDD5 57 aa4.39□□□□□ -1.71
TUBB3-207ENST00000554927 KRTAP25-1Q3LHN0 102 aa4.39□□□□□ -1.71
TUBB3-207ENST00000554927 AHNAKQ09666 5890 aaKnown RBP4.38□□□□□ -1.71
TUBB3-207ENST00000554927 KRTAP5-5Q701N2 237 aaPredicted RBP4.34□□□□□ -1.71
TUBB3-207ENST00000554927 V9GYY9 64 aa4.3□□□□□ -1.72
TUBB3-207ENST00000554927 MUC5ACP98088 5654 aa4.3□□□□□ -1.72
TUBB3-207ENST00000554927 KRTAP4-11Q9BYQ6 195 aa4.29□□□□□ -1.72
TUBB3-207ENST00000554927 KRTAP19-4Q3LI73 84 aa4.28□□□□□ -1.72
TUBB3-207ENST00000554927 SVIPQ8NHG7 77 aa4.28□□□□□ -1.72
TUBB3-207ENST00000554927 MUC5BQ9HC84 5762 aaPredicted RBP4.27□□□□□ -1.73
TUBB3-207ENST00000554927 SYNE1Q8NF91 8797 aaKnown RBP4.25□□□□□ -1.73
TUBB3-207ENST00000554927 PSPHP1O15172 72 aa4.24□□□□□ -1.73
TUBB3-207ENST00000554927 KRTAP23-1A1A580 65 aa4.21□□□□□ -1.74
TUBB3-207ENST00000554927 LOC100996750A0A140TA64 210 aa4.2□□□□□ -1.74
TUBB3-207ENST00000554927 Q1T7F1 81 aa4.19□□□□□ -1.74
TUBB3-207ENST00000554927 KRTAP5-8O75690 187 aa4.17□□□□□ -1.74
TUBB3-207ENST00000554927 KRTAP15-1Q3LI76 137 aa4.16□□□□□ -1.74
TUBB3-207ENST00000554927 A6NED7 52 aa4.13□□□□□ -1.75
TUBB3-207ENST00000554927 CDC42SE1Q9NRR8 79 aa4.11□□□□□ -1.75
TUBB3-207ENST00000554927 LCE3CQ5T5A8 94 aa4.1□□□□□ -1.75
TUBB3-207ENST00000554927 KRTAP5-2Q701N4 177 aa4.07□□□□□ -1.76
TUBB3-207ENST00000554927 KRTAP9-9Q9BYP9 154 aa4.06□□□□□ -1.76
TUBB3-207ENST00000554927 RPS28P62857 69 aaKnown RBP4.04□□□□□ -1.76
TUBB3-207ENST00000554927 ROMO1P60602 79 aa4.02□□□□□ -1.77
TUBB3-207ENST00000554927 OBSCNQ5VST9 7968 aa3.95□□□□□ -1.78
TUBB3-207ENST00000554927 MT1AP04731 61 aa3.94□□□□□ -1.78
TUBB3-207ENST00000554927 KRTAP6-1Q3LI64 71 aa3.94□□□□□ -1.78
TUBB3-207ENST00000554927 KRTAP6-2Q3LI66 62 aa3.88□□□□□ -1.79
TUBB3-207ENST00000554927 KRTAP9-4Q9BYQ2 154 aa3.84□□□□□ -1.79
TUBB3-207ENST00000554927 KRTAP9-6A8MVA2 160 aa3.78□□□□□ -1.8
TUBB3-207ENST00000554927 KRTAP5-1Q6L8H4 278 aa3.75□□□□□ -1.81
TUBB3-207ENST00000554927 PRO0628Q9UI54 55 aa3.7□□□□□ -1.82
TUBB3-207ENST00000554927 MT3P25713 68 aa3.66□□□□□ -1.82
TUBB3-207ENST00000554927 BRK1Q8WUW1 75 aa3.51□□□□□ -1.85
TUBB3-207ENST00000554927 PMAIP1Q13794 54 aa3.45□□□□□ -1.86
TUBB3-207ENST00000554927 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
TUBB3-207ENST00000554927 KTN1-AS1Q86SY8 53 aa3.37□□□□□ -1.87
TUBB3-207ENST00000554927 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
TUBB3-207ENST00000554927 KRTAP4-2Q9BYR5 136 aa3.27□□□□□ -1.89
TUBB3-207ENST00000554927 KRTAP4-12Q9BQ66 201 aa3.21□□□□□ -1.9
TUBB3-207ENST00000554927 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
TUBB3-207ENST00000554927 PRAC1Q96KF2 57 aa3.07□□□□□ -1.92
TUBB3-207ENST00000554927 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
TUBB3-207ENST00000554927 PHGR1C9JFL3 82 aa2.98□□□□□ -1.93
TUBB3-207ENST00000554927 LCE3DQ9BYE3 92 aa2.97□□□□□ -1.93
TUBB3-207ENST00000554927 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
TUBB3-207ENST00000554927 H3BS24 57 aa2.9□□□□□ -1.95
TUBB3-207ENST00000554927 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.79□□□□□ -1.96
TUBB3-207ENST00000554927 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
TUBB3-207ENST00000554927 LUZP6Q538Z0 58 aa2.75□□□□□ -1.97
TUBB3-207ENST00000554927 NDUFAF8A1L188 74 aa2.63□□□□□ -1.99
TUBB3-207ENST00000554927 KRTAP21-2Q3LI59 83 aa2.57□□□□□ -2
TUBB3-207ENST00000554927 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
TUBB3-207ENST00000554927 A0A0A0MQY5 61 aa2.46□□□□□ -2.02
TUBB3-207ENST00000554927 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
TUBB3-207ENST00000554927 INE1O15225 51 aa2.29□□□□□ -2.04
TUBB3-207ENST00000554927 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
TUBB3-207ENST00000554927 PRM1P04553 51 aa2.02□□□□□ -2.09
TUBB3-207ENST00000554927 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 1236 ms