RNA–Protein interactions for RNA: ENST00000554835.1

PRKCH-210, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-210ENST00000554835 SEC61GP60059 68 aa6.26□□□□□ -1.41
PRKCH-210ENST00000554835 LCE3AQ5TA76 89 aa6.25□□□□□ -1.41
PRKCH-210ENST00000554835 SERP2Q8N6R1 65 aa6.22□□□□□ -1.41
PRKCH-210ENST00000554835 K7ERU9 68 aa6.17□□□□□ -1.42
PRKCH-210ENST00000554835 KRTAP5-7Q6L8G8 165 aa6.17□□□□□ -1.42
PRKCH-210ENST00000554835 KRTAP5-3Q6L8H2 238 aa6.16□□□□□ -1.42
PRKCH-210ENST00000554835 A8MU10 97 aa6.11□□□□□ -1.43
PRKCH-210ENST00000554835 TNP1P09430 55 aa6.09□□□□□ -1.43
PRKCH-210ENST00000554835 KRTAP20-2Q3LI61 65 aa6.06□□□□□ -1.44
PRKCH-210ENST00000554835 KRTAP4-11Q9BYQ6 195 aa6.06□□□□□ -1.44
PRKCH-210ENST00000554835 SMIM26A0A096LP01 95 aa6.05□□□□□ -1.44
PRKCH-210ENST00000554835 KRTAP4-2Q9BYR5 136 aa6.05□□□□□ -1.44
PRKCH-210ENST00000554835 KRTAP5-5Q701N2 237 aaPredicted RBP6.02□□□□□ -1.45
PRKCH-210ENST00000554835 KRTAP12-3P60328 96 aa5.98□□□□□ -1.45
PRKCH-210ENST00000554835 SPRR5A0A1B0GTR4 108 aa5.96□□□□□ -1.46
PRKCH-210ENST00000554835 A0A1B0GU69 56 aa5.96□□□□□ -1.46
PRKCH-210ENST00000554835 H7BZZ5 65 aa5.96□□□□□ -1.46
PRKCH-210ENST00000554835 SYNE1Q8NF91 8797 aaKnown RBP5.92□□□□□ -1.46
PRKCH-210ENST00000554835 COX7CP15954 63 aa5.92□□□□□ -1.46
PRKCH-210ENST00000554835 KRTAP23-1A1A580 65 aa5.88□□□□□ -1.47
PRKCH-210ENST00000554835 KRTAP12-4P60329 112 aa5.86□□□□□ -1.47
PRKCH-210ENST00000554835 PRR15LQ9BU68 103 aa5.63□□□□□ -1.51
PRKCH-210ENST00000554835 KRTAP15-1Q3LI76 137 aa5.58□□□□□ -1.52
PRKCH-210ENST00000554835 LINC01558Q9Y6Z2 57 aa5.58□□□□□ -1.52
PRKCH-210ENST00000554835 KRTAP25-1Q3LHN0 102 aa5.56□□□□□ -1.52
PRKCH-210ENST00000554835 KRTAP5-2Q701N4 177 aa5.56□□□□□ -1.52
PRKCH-210ENST00000554835 KRTAP6-1Q3LI64 71 aa5.48□□□□□ -1.53
PRKCH-210ENST00000554835 LCE3CQ5T5A8 94 aa5.48□□□□□ -1.53
PRKCH-210ENST00000554835 UQCR11O14957 56 aa5.47□□□□□ -1.53
PRKCH-210ENST00000554835 ANAPC13Q9BS18 74 aa5.47□□□□□ -1.53
PRKCH-210ENST00000554835 KRTAP5-8O75690 187 aa5.46□□□□□ -1.54
PRKCH-210ENST00000554835 MT1AP04731 61 aa5.46□□□□□ -1.54
PRKCH-210ENST00000554835 CCDC179H3BU77 68 aa5.45□□□□□ -1.54
PRKCH-210ENST00000554835 AHNAKQ09666 5890 aaKnown RBP5.42□□□□□ -1.54
PRKCH-210ENST00000554835 MUC5ACP98088 5654 aa5.41□□□□□ -1.54
PRKCH-210ENST00000554835 ATP5EP56381 51 aaPredicted RBP5.41□□□□□ -1.54
PRKCH-210ENST00000554835 MUC5BQ9HC84 5762 aaPredicted RBP5.39□□□□□ -1.55
PRKCH-210ENST00000554835 OBSCNQ5VST9 7968 aa5.37□□□□□ -1.55
PRKCH-210ENST00000554835 MIR22HGQ0VDD5 57 aa5.33□□□□□ -1.56
PRKCH-210ENST00000554835 KRTAP6-2Q3LI66 62 aa5.29□□□□□ -1.56
PRKCH-210ENST00000554835 KRTAP9-6A8MVA2 160 aa5.27□□□□□ -1.57
PRKCH-210ENST00000554835 K7ERS5 55 aa5.22□□□□□ -1.57
PRKCH-210ENST00000554835 TMEM258P61165 79 aa5.14□□□□□ -1.59
PRKCH-210ENST00000554835 PSPHP1O15172 72 aa5.06□□□□□ -1.6
PRKCH-210ENST00000554835 KRTAP5-1Q6L8H4 278 aa5.06□□□□□ -1.6
PRKCH-210ENST00000554835 MT3P25713 68 aa4.98□□□□□ -1.61
PRKCH-210ENST00000554835 Q1T7F1 81 aa4.98□□□□□ -1.61
PRKCH-210ENST00000554835 CDC42SE1Q9NRR8 79 aa4.95□□□□□ -1.62
PRKCH-210ENST00000554835 RPS28P62857 69 aaKnown RBP4.94□□□□□ -1.62
PRKCH-210ENST00000554835 V9GYY9 64 aa4.91□□□□□ -1.62
PRKCH-210ENST00000554835 ROMO1P60602 79 aa4.87□□□□□ -1.63
PRKCH-210ENST00000554835 A6NED7 52 aa4.81□□□□□ -1.64
PRKCH-210ENST00000554835 LCE1EQ5T753 118 aa4.67□□□□□ -1.66
PRKCH-210ENST00000554835 SVIPQ8NHG7 77 aa4.64□□□□□ -1.67
PRKCH-210ENST00000554835 PCP4P48539 62 aa4.6□□□□□ -1.67
PRKCH-210ENST00000554835 A0A0A0MQY5 61 aa4.5□□□□□ -1.69
PRKCH-210ENST00000554835 LCE1BQ5T7P3 118 aa4.43□□□□□ -1.7
PRKCH-210ENST00000554835 LCE1CQ5T751 118 aa4.34□□□□□ -1.71
PRKCH-210ENST00000554835 KRTAP5-11Q6L8G4 156 aa4.08□□□□□ -1.76
PRKCH-210ENST00000554835 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.96□□□□□ -1.78
PRKCH-210ENST00000554835 LCE1FQ5T754 118 aa3.92□□□□□ -1.78
PRKCH-210ENST00000554835 LCE3DQ9BYE3 92 aa3.86□□□□□ -1.79
PRKCH-210ENST00000554835 NDUFAF8A1L188 74 aa3.72□□□□□ -1.81
PRKCH-210ENST00000554835 PHGR1C9JFL3 82 aa3.71□□□□□ -1.82
PRKCH-210ENST00000554835 PRAC1Q96KF2 57 aa3.71□□□□□ -1.82
PRKCH-210ENST00000554835 BRK1Q8WUW1 75 aa3.67□□□□□ -1.82
PRKCH-210ENST00000554835 KRTAP21-2Q3LI59 83 aa3.63□□□□□ -1.83
PRKCH-210ENST00000554835 LCE3EQ5T5B0 92 aa3.57□□□□□ -1.84
PRKCH-210ENST00000554835 PMAIP1Q13794 54 aa3.41□□□□□ -1.86
PRKCH-210ENST00000554835 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
PRKCH-210ENST00000554835 MUC19Q7Z5P9 8384 aa3.34□□□□□ -1.87
PRKCH-210ENST00000554835 LUZP6Q538Z0 58 aa2.88□□□□□ -1.95
PRKCH-210ENST00000554835 KRTAP21-1Q3LI58 79 aa2.8□□□□□ -1.96
PRKCH-210ENST00000554835 PRO0628Q9UI54 55 aa2.76□□□□□ -1.97
PRKCH-210ENST00000554835 KTN1-AS1Q86SY8 53 aa2.74□□□□□ -1.97
PRKCH-210ENST00000554835 PRM1P04553 51 aa2.5□□□□□ -2.01
PRKCH-210ENST00000554835 MUC16Q8WXI7 14507 aa2.34□□□□□ -2.03
PRKCH-210ENST00000554835 INE1O15225 51 aa1.58□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 62.3 ms