RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 M0QZ58 72 aa2.16□□□□□ -2.06
PPP4R3A-204ENST00000554574 RNF213Q63HN8 5207 aa2.13□□□□□ -2.07
PPP4R3A-204ENST00000554574 KTN1-AS1Q86SY8 53 aa2.13□□□□□ -2.07
PPP4R3A-204ENST00000554574 A0A0D9SG42 100 aa2.12□□□□□ -2.07
PPP4R3A-204ENST00000554574 KRTAP10-10P60014 251 aa2.12□□□□□ -2.07
PPP4R3A-204ENST00000554574 MT1HP80294 61 aa2.11□□□□□ -2.07
PPP4R3A-204ENST00000554574 FAT4Q6V0I7 4981 aa2.1□□□□□ -2.07
PPP4R3A-204ENST00000554574 KRTAP12-1P59990 96 aa2.1□□□□□ -2.07
PPP4R3A-204ENST00000554574 CRIPTQ9P021 101 aa2.1□□□□□ -2.07
PPP4R3A-204ENST00000554574 M0R2T5 61 aa2.09□□□□□ -2.08
PPP4R3A-204ENST00000554574 LINC01554Q52M75 96 aa2.07□□□□□ -2.08
PPP4R3A-204ENST00000554574 ROMO1P60602 79 aa2.05□□□□□ -2.08
PPP4R3A-204ENST00000554574 LCE3AQ5TA76 89 aa2.05□□□□□ -2.08
PPP4R3A-204ENST00000554574 MT2AP02795 61 aa2.04□□□□□ -2.08
PPP4R3A-204ENST00000554574 SPRR2GQ9BYE4 73 aa2.04□□□□□ -2.08
PPP4R3A-204ENST00000554574 MT1FP04733 61 aa2.03□□□□□ -2.08
PPP4R3A-204ENST00000554574 PP632Q6XCG6 107 aa1.99□□□□□ -2.09
PPP4R3A-204ENST00000554574 KRTAP5-5Q701N2 237 aaPredicted RBP1.99□□□□□ -2.09
PPP4R3A-204ENST00000554574 KRTAP19-8Q3LI54 63 aa1.97□□□□□ -2.09
PPP4R3A-204ENST00000554574 C10orf95Q9H7T3 257 aa1.97□□□□□ -2.09
PPP4R3A-204ENST00000554574 PLAC4Q8WY50 150 aa1.97□□□□□ -2.09
PPP4R3A-204ENST00000554574 CRCT1Q9UGL9 99 aa1.96□□□□□ -2.1
PPP4R3A-204ENST00000554574 MT1BP07438 61 aa1.93□□□□□ -2.1
PPP4R3A-204ENST00000554574 PRO2289Q9P1D8 64 aa1.91□□□□□ -2.1
PPP4R3A-204ENST00000554574 TNP1P09430 55 aa1.91□□□□□ -2.1
PPP4R3A-204ENST00000554574 KRTAP6-3Q3LI67 103 aa1.9□□□□□ -2.11
PPP4R3A-204ENST00000554574 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
PPP4R3A-204ENST00000554574 MT1XP80297 61 aa1.89□□□□□ -2.11
PPP4R3A-204ENST00000554574 USH2AO75445 5202 aa1.83□□□□□ -2.12
PPP4R3A-204ENST00000554574 KRTAP8-1Q8IUC2 63 aa1.79□□□□□ -2.12
PPP4R3A-204ENST00000554574 KRTAP19-6Q3LI70 58 aa1.78□□□□□ -2.13
PPP4R3A-204ENST00000554574 SSPOA2VEC9 5147 aa1.77□□□□□ -2.13
PPP4R3A-204ENST00000554574 KRTAP12-3P60328 96 aa1.77□□□□□ -2.13
PPP4R3A-204ENST00000554574 NEBP20929 6669 aa1.76□□□□□ -2.13
PPP4R3A-204ENST00000554574 KRTAP20-1Q3LI63 56 aa1.76□□□□□ -2.13
PPP4R3A-204ENST00000554574 FSIP2Q5CZC0 6907 aa1.74□□□□□ -2.13
PPP4R3A-204ENST00000554574 LCE1CQ5T751 118 aa1.73□□□□□ -2.13
PPP4R3A-204ENST00000554574 LCE1BQ5T7P3 118 aa1.73□□□□□ -2.13
PPP4R3A-204ENST00000554574 KMT2DO14686 5537 aa1.71□□□□□ -2.14
PPP4R3A-204ENST00000554574 KRTAP19-5Q3LI72 72 aa1.71□□□□□ -2.14
PPP4R3A-204ENST00000554574 KRTAP19-7Q3SYF9 63 aa1.68□□□□□ -2.14
PPP4R3A-204ENST00000554574 FCGBPQ9Y6R7 5405 aaPredicted RBP1.68□□□□□ -2.14
PPP4R3A-204ENST00000554574 MT1EP04732 61 aa1.65□□□□□ -2.15
PPP4R3A-204ENST00000554574 KRTAP12-4P60329 112 aa1.64□□□□□ -2.15
PPP4R3A-204ENST00000554574 SYNE2Q8WXH0 6885 aaKnown RBP1.63□□□□□ -2.15
PPP4R3A-204ENST00000554574 AHNAK2Q8IVF2 5795 aa1.63□□□□□ -2.15
PPP4R3A-204ENST00000554574 MT1LQ93083 61 aa1.62□□□□□ -2.15
PPP4R3A-204ENST00000554574 MACF1Q9UPN3 7388 aaKnown RBP1.59□□□□□ -2.15
PPP4R3A-204ENST00000554574 KRTAP19-3Q7Z4W3 81 aa1.58□□□□□ -2.16
PPP4R3A-204ENST00000554574 SPRR2FQ96RM1 72 aa1.58□□□□□ -2.16
PPP4R3A-204ENST00000554574 MT1GP13640 62 aa1.57□□□□□ -2.16
PPP4R3A-204ENST00000554574 MUC12Q9UKN1 5478 aa1.56□□□□□ -2.16
PPP4R3A-204ENST00000554574 MT1MQ8N339 61 aa1.55□□□□□ -2.16
PPP4R3A-204ENST00000554574 KRTAP2-3P0C7H8 128 aa1.52□□□□□ -2.17
PPP4R3A-204ENST00000554574 KRTAP2-4Q9BYR9 128 aa1.52□□□□□ -2.17
PPP4R3A-204ENST00000554574 KRTAP5-7Q6L8G8 165 aa1.51□□□□□ -2.17
PPP4R3A-204ENST00000554574 SPRR2EP22531 72 aa1.48□□□□□ -2.17
PPP4R3A-204ENST00000554574 SPRR2BP35325 72 aa1.48□□□□□ -2.17
PPP4R3A-204ENST00000554574 SPRR2AP35326 72 aa1.48□□□□□ -2.17
PPP4R3A-204ENST00000554574 MDN1Q9NU22 5596 aa1.48□□□□□ -2.17
PPP4R3A-204ENST00000554574 KRTAP2-1Q9BYU5 128 aa1.46□□□□□ -2.18
PPP4R3A-204ENST00000554574 DSTQ03001 7570 aaKnown RBP1.46□□□□□ -2.18
PPP4R3A-204ENST00000554574 MUC19Q7Z5P9 8384 aa1.43□□□□□ -2.18
PPP4R3A-204ENST00000554574 SPRR2DP22532 72 aa1.42□□□□□ -2.18
PPP4R3A-204ENST00000554574 KRTAP5-10Q6L8G5 202 aa1.42□□□□□ -2.18
PPP4R3A-204ENST00000554574 INE1O15225 51 aa1.42□□□□□ -2.18
PPP4R3A-204ENST00000554574 MT1AP04731 61 aa1.38□□□□□ -2.19
PPP4R3A-204ENST00000554574 KRTAP6-1Q3LI64 71 aa1.36□□□□□ -2.19
PPP4R3A-204ENST00000554574 MUC5ACP98088 5654 aa1.35□□□□□ -2.19
PPP4R3A-204ENST00000554574 SYNE1Q8NF91 8797 aaKnown RBP1.29□□□□□ -2.2
PPP4R3A-204ENST00000554574 KRTAP6-2Q3LI66 62 aa1.25□□□□□ -2.21
PPP4R3A-204ENST00000554574 KRTAP21-2Q3LI59 83 aa1.23□□□□□ -2.21
PPP4R3A-204ENST00000554574 MT4P47944 62 aa1.23□□□□□ -2.21
PPP4R3A-204ENST00000554574 KRTAP20-2Q3LI61 65 aa1.22□□□□□ -2.21
PPP4R3A-204ENST00000554574 PRM1P04553 51 aa1.07□□□□□ -2.24
PPP4R3A-204ENST00000554574 PHGR1C9JFL3 82 aa0.84□□□□□ -2.27
PPP4R3A-204ENST00000554574 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
PPP4R3A-204ENST00000554574 KRTAP21-1Q3LI58 79 aa0.69□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 128.2 ms