RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 A8MU10 97 aa7.57□□□□□ -1.2
GABRB3-206ENST00000554556 COX7CP15954 63 aa7.53□□□□□ -1.2
GABRB3-206ENST00000554556 H7BZZ5 65 aa7.5□□□□□ -1.21
GABRB3-206ENST00000554556 KRTAP5-7Q6L8G8 165 aa7.47□□□□□ -1.21
GABRB3-206ENST00000554556 KRTAP5-3Q6L8H2 238 aa7.46□□□□□ -1.22
GABRB3-206ENST00000554556 KRTAP4-7Q9BYR0 210 aa7.44□□□□□ -1.22
GABRB3-206ENST00000554556 KRTAP12-3P60328 96 aa7.42□□□□□ -1.22
GABRB3-206ENST00000554556 KRTAP20-2Q3LI61 65 aa7.37□□□□□ -1.23
GABRB3-206ENST00000554556 SPRR5A0A1B0GTR4 108 aa7.32□□□□□ -1.24
GABRB3-206ENST00000554556 KRTAP12-4P60329 112 aa7.28□□□□□ -1.24
GABRB3-206ENST00000554556 KRTAP5-5Q701N2 237 aaPredicted RBP7.28□□□□□ -1.24
GABRB3-206ENST00000554556 PRR15LQ9BU68 103 aa7.28□□□□□ -1.24
GABRB3-206ENST00000554556 LINC01558Q9Y6Z2 57 aa7.08□□□□□ -1.28
GABRB3-206ENST00000554556 LOC100996750A0A140TA64 210 aa7.07□□□□□ -1.28
GABRB3-206ENST00000554556 KRTAP19-4Q3LI73 84 aa7.05□□□□□ -1.28
GABRB3-206ENST00000554556 KRTAP25-1Q3LHN0 102 aa7.04□□□□□ -1.28
GABRB3-206ENST00000554556 ANAPC13Q9BS18 74 aa7.04□□□□□ -1.28
GABRB3-206ENST00000554556 SYNE1Q8NF91 8797 aaKnown RBP7.04□□□□□ -1.28
GABRB3-206ENST00000554556 UQCR11O14957 56 aa7.02□□□□□ -1.29
GABRB3-206ENST00000554556 ATP5EP56381 51 aaPredicted RBP7□□□□□ -1.29
GABRB3-206ENST00000554556 CCDC179H3BU77 68 aa6.88□□□□□ -1.31
GABRB3-206ENST00000554556 KRTAP4-11Q9BYQ6 195 aa6.83□□□□□ -1.32
GABRB3-206ENST00000554556 K7ERS5 55 aa6.82□□□□□ -1.32
GABRB3-206ENST00000554556 KRTAP15-1Q3LI76 137 aa6.82□□□□□ -1.32
GABRB3-206ENST00000554556 MIR22HGQ0VDD5 57 aa6.81□□□□□ -1.32
GABRB3-206ENST00000554556 LCE3CQ5T5A8 94 aa6.79□□□□□ -1.32
GABRB3-206ENST00000554556 KRTAP23-1A1A580 65 aa6.77□□□□□ -1.33
GABRB3-206ENST00000554556 KRTAP5-2Q701N4 177 aa6.74□□□□□ -1.33
GABRB3-206ENST00000554556 MT1AP04731 61 aa6.71□□□□□ -1.34
GABRB3-206ENST00000554556 KRTAP6-1Q3LI64 71 aa6.67□□□□□ -1.34
GABRB3-206ENST00000554556 TMEM258P61165 79 aa6.64□□□□□ -1.35
GABRB3-206ENST00000554556 KRTAP5-8O75690 187 aa6.59□□□□□ -1.35
GABRB3-206ENST00000554556 KRTAP9-4Q9BYQ2 154 aa6.54□□□□□ -1.36
GABRB3-206ENST00000554556 KRTAP6-2Q3LI66 62 aa6.45□□□□□ -1.38
GABRB3-206ENST00000554556 V9GYY9 64 aa6.44□□□□□ -1.38
GABRB3-206ENST00000554556 PSPHP1O15172 72 aa6.42□□□□□ -1.38
GABRB3-206ENST00000554556 OBSCNQ5VST9 7968 aa6.39□□□□□ -1.39
GABRB3-206ENST00000554556 MUC5ACP98088 5654 aa6.38□□□□□ -1.39
GABRB3-206ENST00000554556 AHNAKQ09666 5890 aaKnown RBP6.37□□□□□ -1.39
GABRB3-206ENST00000554556 KRTAP9-9Q9BYP9 154 aa6.37□□□□□ -1.39
GABRB3-206ENST00000554556 KRTAP9-6A8MVA2 160 aa6.35□□□□□ -1.39
GABRB3-206ENST00000554556 RPS28P62857 69 aaKnown RBP6.35□□□□□ -1.39
GABRB3-206ENST00000554556 CDC42SE1Q9NRR8 79 aa6.35□□□□□ -1.39
GABRB3-206ENST00000554556 Q1T7F1 81 aa6.34□□□□□ -1.39
GABRB3-206ENST00000554556 MUC5BQ9HC84 5762 aaPredicted RBP6.33□□□□□ -1.4
GABRB3-206ENST00000554556 A6NED7 52 aa6.21□□□□□ -1.42
GABRB3-206ENST00000554556 ROMO1P60602 79 aa6.21□□□□□ -1.42
GABRB3-206ENST00000554556 MT3P25713 68 aa6.19□□□□□ -1.42
GABRB3-206ENST00000554556 KRTAP5-1Q6L8H4 278 aa6.11□□□□□ -1.43
GABRB3-206ENST00000554556 LCE1EQ5T753 118 aa5.76□□□□□ -1.49
GABRB3-206ENST00000554556 LCE1BQ5T7P3 118 aa5.45□□□□□ -1.54
GABRB3-206ENST00000554556 KRTAP4-2Q9BYR5 136 aa5.43□□□□□ -1.54
GABRB3-206ENST00000554556 LCE1CQ5T751 118 aa5.34□□□□□ -1.55
GABRB3-206ENST00000554556 KRTAP4-12Q9BQ66 201 aa5.07□□□□□ -1.6
GABRB3-206ENST00000554556 PCP4P48539 62 aa5□□□□□ -1.61
GABRB3-206ENST00000554556 KRTAP5-11Q6L8G4 156 aa4.86□□□□□ -1.63
GABRB3-206ENST00000554556 LCE1FQ5T754 118 aa4.85□□□□□ -1.63
GABRB3-206ENST00000554556 LCE3DQ9BYE3 92 aa4.84□□□□□ -1.63
GABRB3-206ENST00000554556 BRK1Q8WUW1 75 aa4.82□□□□□ -1.64
GABRB3-206ENST00000554556 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.8□□□□□ -1.64
GABRB3-206ENST00000554556 H3BS24 57 aa4.57□□□□□ -1.68
GABRB3-206ENST00000554556 PHGR1C9JFL3 82 aa4.52□□□□□ -1.69
GABRB3-206ENST00000554556 PMAIP1Q13794 54 aa4.52□□□□□ -1.69
GABRB3-206ENST00000554556 LCE3EQ5T5B0 92 aa4.49□□□□□ -1.69
GABRB3-206ENST00000554556 PRAC1Q96KF2 57 aa4.43□□□□□ -1.7
GABRB3-206ENST00000554556 KRTAP21-2Q3LI59 83 aa4.39□□□□□ -1.71
GABRB3-206ENST00000554556 KRTAP4-4Q9BYR3 166 aa4.08□□□□□ -1.76
GABRB3-206ENST00000554556 MUC19Q7Z5P9 8384 aa3.96□□□□□ -1.78
GABRB3-206ENST00000554556 LUZP6Q538Z0 58 aa3.93□□□□□ -1.78
GABRB3-206ENST00000554556 SVIPQ8NHG7 77 aa3.77□□□□□ -1.81
GABRB3-206ENST00000554556 PRO0628Q9UI54 55 aa3.71□□□□□ -1.82
GABRB3-206ENST00000554556 KTN1-AS1Q86SY8 53 aa3.69□□□□□ -1.82
GABRB3-206ENST00000554556 KRTAP21-1Q3LI58 79 aa3.46□□□□□ -1.86
GABRB3-206ENST00000554556 A0A0A0MQY5 61 aa3.2□□□□□ -1.9
GABRB3-206ENST00000554556 PRM1P04553 51 aa3.13□□□□□ -1.91
GABRB3-206ENST00000554556 MUC16Q8WXI7 14507 aa2.81□□□□□ -1.96
GABRB3-206ENST00000554556 NDUFAF8A1L188 74 aa2.54□□□□□ -2
GABRB3-206ENST00000554556 INE1O15225 51 aa1.98□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 67.9 ms