RNA–Protein interactions for RNA: ENST00000554533.5

CASC1-207, Transcript of cancer susceptibility 1, humanhuman

TSL 2

Gene CASC1, Length 2,208 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-207ENST00000554533 LCE3AQ5TA76 89 aa2.15□□□□□ -2.06
CASC1-207ENST00000554533 C9orf92A6NGG3 77 aa2.13□□□□□ -2.07
CASC1-207ENST00000554533 MUC2Q02817 5179 aa2.11□□□□□ -2.07
CASC1-207ENST00000554533 M0QZ58 72 aa2.11□□□□□ -2.07
CASC1-207ENST00000554533 MUC17Q685J3 4493 aa2.07□□□□□ -2.08
CASC1-207ENST00000554533 KRTAP5-1Q6L8H4 278 aa2.07□□□□□ -2.08
CASC1-207ENST00000554533 KRTAP6-3Q3LI67 103 aa2.05□□□□□ -2.08
CASC1-207ENST00000554533 KRTAP4-1Q9BYQ7 146 aa2.02□□□□□ -2.09
CASC1-207ENST00000554533 FAT4Q6V0I7 4981 aa2.02□□□□□ -2.09
CASC1-207ENST00000554533 KRTAP5-5Q701N2 237 aaPredicted RBP2.01□□□□□ -2.09
CASC1-207ENST00000554533 KRTAP4-4Q9BYR3 166 aa2□□□□□ -2.09
CASC1-207ENST00000554533 FLGP20930 4061 aaPredicted RBP1.97□□□□□ -2.09
CASC1-207ENST00000554533 KRTAP5-4Q6L8H1 288 aa1.96□□□□□ -2.1
CASC1-207ENST00000554533 KRTAP19-2Q3LHN2 52 aa1.94□□□□□ -2.1
CASC1-207ENST00000554533 M0R2T5 61 aa1.94□□□□□ -2.1
CASC1-207ENST00000554533 MT1HP80294 61 aa1.93□□□□□ -2.1
CASC1-207ENST00000554533 TNP1P09430 55 aa1.91□□□□□ -2.1
CASC1-207ENST00000554533 KRTAP12-3P60328 96 aa1.89□□□□□ -2.11
CASC1-207ENST00000554533 KRTAP5-8O75690 187 aa1.87□□□□□ -2.11
CASC1-207ENST00000554533 FSIP2Q5CZC0 6907 aa1.85□□□□□ -2.11
CASC1-207ENST00000554533 OBSCNQ5VST9 7968 aa1.85□□□□□ -2.11
CASC1-207ENST00000554533 MT2AP02795 61 aa1.82□□□□□ -2.12
CASC1-207ENST00000554533 USH2AO75445 5202 aa1.81□□□□□ -2.12
CASC1-207ENST00000554533 LCE1CQ5T751 118 aa1.81□□□□□ -2.12
CASC1-207ENST00000554533 LCE1BQ5T7P3 118 aa1.81□□□□□ -2.12
CASC1-207ENST00000554533 MT1FP04733 61 aa1.81□□□□□ -2.12
CASC1-207ENST00000554533 KRTAP5-2Q701N4 177 aa1.81□□□□□ -2.12
CASC1-207ENST00000554533 AHNAKQ09666 5890 aaKnown RBP1.8□□□□□ -2.12
CASC1-207ENST00000554533 SSPOA2VEC9 5147 aa1.77□□□□□ -2.13
CASC1-207ENST00000554533 KRTAP12-4P60329 112 aa1.74□□□□□ -2.13
CASC1-207ENST00000554533 KRTAP4-3Q9BYR4 195 aa1.74□□□□□ -2.13
CASC1-207ENST00000554533 CRCT1Q9UGL9 99 aa1.74□□□□□ -2.13
CASC1-207ENST00000554533 FCGBPQ9Y6R7 5405 aaPredicted RBP1.71□□□□□ -2.14
CASC1-207ENST00000554533 SPRR2GQ9BYE4 73 aa1.7□□□□□ -2.14
CASC1-207ENST00000554533 KRTAP2-3P0C7H8 128 aa1.7□□□□□ -2.14
CASC1-207ENST00000554533 KRTAP2-4Q9BYR9 128 aa1.7□□□□□ -2.14
CASC1-207ENST00000554533 KRTAP2-1Q9BYU5 128 aa1.7□□□□□ -2.14
CASC1-207ENST00000554533 KRTAP8-1Q8IUC2 63 aa1.69□□□□□ -2.14
CASC1-207ENST00000554533 KRTAP19-8Q3LI54 63 aa1.67□□□□□ -2.14
CASC1-207ENST00000554533 MT1BP07438 61 aa1.67□□□□□ -2.14
CASC1-207ENST00000554533 SYNE2Q8WXH0 6885 aaKnown RBP1.66□□□□□ -2.14
CASC1-207ENST00000554533 MACF1Q9UPN3 7388 aaKnown RBP1.66□□□□□ -2.14
CASC1-207ENST00000554533 KRTAP19-6Q3LI70 58 aa1.66□□□□□ -2.14
CASC1-207ENST00000554533 KMT2DO14686 5537 aa1.61□□□□□ -2.15
CASC1-207ENST00000554533 MT1XP80297 61 aa1.59□□□□□ -2.16
CASC1-207ENST00000554533 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
CASC1-207ENST00000554533 MUC12Q9UKN1 5478 aa1.55□□□□□ -2.16
CASC1-207ENST00000554533 AHNAK2Q8IVF2 5795 aa1.55□□□□□ -2.16
CASC1-207ENST00000554533 MDN1Q9NU22 5596 aa1.53□□□□□ -2.16
CASC1-207ENST00000554533 PRM1P04553 51 aa1.52□□□□□ -2.17
CASC1-207ENST00000554533 SYNE1Q8NF91 8797 aaKnown RBP1.52□□□□□ -2.17
CASC1-207ENST00000554533 NEBP20929 6669 aa1.52□□□□□ -2.17
CASC1-207ENST00000554533 SPRR2FQ96RM1 72 aa1.49□□□□□ -2.17
CASC1-207ENST00000554533 KRTAP19-5Q3LI72 72 aa1.47□□□□□ -2.17
CASC1-207ENST00000554533 MUC19Q7Z5P9 8384 aa1.45□□□□□ -2.18
CASC1-207ENST00000554533 SPRR2EP22531 72 aa1.44□□□□□ -2.18
CASC1-207ENST00000554533 SPRR2BP35325 72 aa1.44□□□□□ -2.18
CASC1-207ENST00000554533 SPRR2AP35326 72 aa1.44□□□□□ -2.18
CASC1-207ENST00000554533 KRTAP19-7Q3SYF9 63 aa1.42□□□□□ -2.18
CASC1-207ENST00000554533 KRTAP20-1Q3LI63 56 aa1.42□□□□□ -2.18
CASC1-207ENST00000554533 DSTQ03001 7570 aaKnown RBP1.4□□□□□ -2.18
CASC1-207ENST00000554533 MT1EP04732 61 aa1.4□□□□□ -2.19
CASC1-207ENST00000554533 SPRR2DP22532 72 aa1.39□□□□□ -2.19
CASC1-207ENST00000554533 KRTAP19-3Q7Z4W3 81 aa1.38□□□□□ -2.19
CASC1-207ENST00000554533 MT1GP13640 62 aa1.35□□□□□ -2.19
CASC1-207ENST00000554533 MT1LQ93083 61 aa1.35□□□□□ -2.19
CASC1-207ENST00000554533 MT1MQ8N339 61 aa1.34□□□□□ -2.2
CASC1-207ENST00000554533 KRTAP6-2Q3LI66 62 aa1.31□□□□□ -2.2
CASC1-207ENST00000554533 KRTAP21-2Q3LI59 83 aa1.28□□□□□ -2.2
CASC1-207ENST00000554533 MT1AP04731 61 aa1.27□□□□□ -2.21
CASC1-207ENST00000554533 MUC5ACP98088 5654 aa1.24□□□□□ -2.21
CASC1-207ENST00000554533 MT4P47944 62 aa1.23□□□□□ -2.21
CASC1-207ENST00000554533 KRTAP6-1Q3LI64 71 aa1.15□□□□□ -2.23
CASC1-207ENST00000554533 KRTAP20-2Q3LI61 65 aa1.15□□□□□ -2.23
CASC1-207ENST00000554533 KRTAP5-10Q6L8G5 202 aa1.12□□□□□ -2.23
CASC1-207ENST00000554533 KRTAP21-1Q3LI58 79 aa1□□□□□ -2.25
CASC1-207ENST00000554533 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
CASC1-207ENST00000554533 PHGR1C9JFL3 82 aa0.67□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 30.3 ms