RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 KRTAP4-7Q9BYR0 210 aa5.14□□□□□ -1.59
PPP4R3A-201ENST00000554308 MT1LQ93083 61 aa5.12□□□□□ -1.59
PPP4R3A-201ENST00000554308 SYNE2Q8WXH0 6885 aaKnown RBP5.09□□□□□ -1.59
PPP4R3A-201ENST00000554308 CRCT1Q9UGL9 99 aa5.05□□□□□ -1.6
PPP4R3A-201ENST00000554308 SPRR2FQ96RM1 72 aa5.01□□□□□ -1.61
PPP4R3A-201ENST00000554308 LOC100996750A0A140TA64 210 aa5□□□□□ -1.61
PPP4R3A-201ENST00000554308 KRTAP4-6Q9BYQ5 205 aa5□□□□□ -1.61
PPP4R3A-201ENST00000554308 KRTAP2-3P0C7H8 128 aa4.99□□□□□ -1.61
PPP4R3A-201ENST00000554308 KRTAP2-4Q9BYR9 128 aa4.99□□□□□ -1.61
PPP4R3A-201ENST00000554308 KRTAP2-1Q9BYU5 128 aa4.99□□□□□ -1.61
PPP4R3A-201ENST00000554308 DSTQ03001 7570 aaKnown RBP4.99□□□□□ -1.61
PPP4R3A-201ENST00000554308 MDN1Q9NU22 5596 aa4.96□□□□□ -1.62
PPP4R3A-201ENST00000554308 KRTAP19-3Q7Z4W3 81 aa4.93□□□□□ -1.62
PPP4R3A-201ENST00000554308 KRTAP19-4Q3LI73 84 aa4.92□□□□□ -1.62
PPP4R3A-201ENST00000554308 KRTAP4-3Q9BYR4 195 aa4.92□□□□□ -1.62
PPP4R3A-201ENST00000554308 MT1GP13640 62 aa4.89□□□□□ -1.63
PPP4R3A-201ENST00000554308 MT1MQ8N339 61 aa4.86□□□□□ -1.63
PPP4R3A-201ENST00000554308 KRTAP9-6A0A140TA67 174 aa4.82□□□□□ -1.64
PPP4R3A-201ENST00000554308 LCE5AQ5TCM9 118 aa4.81□□□□□ -1.64
PPP4R3A-201ENST00000554308 KRTAP5-9P26371 169 aa4.74□□□□□ -1.65
PPP4R3A-201ENST00000554308 LCE1AQ5T7P2 110 aa4.7□□□□□ -1.66
PPP4R3A-201ENST00000554308 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.66□□□□□ -1.66
PPP4R3A-201ENST00000554308 SPRR2EP22531 72 aa4.66□□□□□ -1.66
PPP4R3A-201ENST00000554308 SPRR2BP35325 72 aa4.66□□□□□ -1.66
PPP4R3A-201ENST00000554308 SPRR2AP35326 72 aa4.66□□□□□ -1.66
PPP4R3A-201ENST00000554308 KRTAP6-3Q3LI67 103 aa4.54□□□□□ -1.68
PPP4R3A-201ENST00000554308 KRTAP12-4P60329 112 aa4.5□□□□□ -1.69
PPP4R3A-201ENST00000554308 SPRR2DP22532 72 aa4.46□□□□□ -1.69
PPP4R3A-201ENST00000554308 SYNE1Q8NF91 8797 aaKnown RBP4.45□□□□□ -1.7
PPP4R3A-201ENST00000554308 KRTAP9-7A8MTY7 169 aa4.4□□□□□ -1.7
PPP4R3A-201ENST00000554308 LCE3BQ5TA77 95 aa4.39□□□□□ -1.71
PPP4R3A-201ENST00000554308 KRTAP4-9Q9BYQ8 210 aa4.38□□□□□ -1.71
PPP4R3A-201ENST00000554308 KRTAP6-1Q3LI64 71 aa4.36□□□□□ -1.71
PPP4R3A-201ENST00000554308 KRTAP4-12Q9BQ66 201 aa4.34□□□□□ -1.71
PPP4R3A-201ENST00000554308 KRTAP5-5Q701N2 237 aaPredicted RBP4.32□□□□□ -1.72
PPP4R3A-201ENST00000554308 MT1AP04731 61 aa4.29□□□□□ -1.72
PPP4R3A-201ENST00000554308 NEBP20929 6669 aa4.29□□□□□ -1.72
PPP4R3A-201ENST00000554308 KRTAP9-9Q9BYP9 154 aa4.18□□□□□ -1.74
PPP4R3A-201ENST00000554308 KRTAP9-4Q9BYQ2 154 aa4.18□□□□□ -1.74
PPP4R3A-201ENST00000554308 OBSCNQ5VST9 7968 aa4.17□□□□□ -1.74
PPP4R3A-201ENST00000554308 LCE1DQ5T752 114 aa4.12□□□□□ -1.75
PPP4R3A-201ENST00000554308 LCE3DQ9BYE3 92 aa4.09□□□□□ -1.75
PPP4R3A-201ENST00000554308 LCE3EQ5T5B0 92 aa4.04□□□□□ -1.76
PPP4R3A-201ENST00000554308 PRM1P04553 51 aa4.03□□□□□ -1.76
PPP4R3A-201ENST00000554308 KRTAP6-2Q3LI66 62 aa3.99□□□□□ -1.77
PPP4R3A-201ENST00000554308 KRTAP5-4Q6L8H1 288 aa3.99□□□□□ -1.77
PPP4R3A-201ENST00000554308 MT4P47944 62 aa3.96□□□□□ -1.77
PPP4R3A-201ENST00000554308 MT3P25713 68 aa3.9□□□□□ -1.79
PPP4R3A-201ENST00000554308 KRTAP20-1Q3LI63 56 aa3.9□□□□□ -1.79
PPP4R3A-201ENST00000554308 HMCN1Q96RW7 5635 aa3.89□□□□□ -1.79
PPP4R3A-201ENST00000554308 KRTAP2-2Q9BYT5 123 aa3.88□□□□□ -1.79
PPP4R3A-201ENST00000554308 LCE4AQ5TA78 99 aa3.84□□□□□ -1.79
PPP4R3A-201ENST00000554308 KRTAP4-2Q9BYR5 136 aa3.84□□□□□ -1.79
PPP4R3A-201ENST00000554308 KRTAP4-11Q9BYQ6 195 aa3.81□□□□□ -1.8
PPP4R3A-201ENST00000554308 KRTAP20-2Q3LI61 65 aa3.79□□□□□ -1.8
PPP4R3A-201ENST00000554308 KRTAP5-2Q701N4 177 aa3.65□□□□□ -1.83
PPP4R3A-201ENST00000554308 KRTAP5-3Q6L8H2 238 aa3.61□□□□□ -1.83
PPP4R3A-201ENST00000554308 MUC5ACP98088 5654 aa3.29□□□□□ -1.88
PPP4R3A-201ENST00000554308 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
PPP4R3A-201ENST00000554308 AHNAK2Q8IVF2 5795 aa3.26□□□□□ -1.89
PPP4R3A-201ENST00000554308 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
PPP4R3A-201ENST00000554308 KRTAP5-1Q6L8H4 278 aa3.18□□□□□ -1.9
PPP4R3A-201ENST00000554308 KRTAP5-8O75690 187 aa3.1□□□□□ -1.91
PPP4R3A-201ENST00000554308 KRTAP5-10Q6L8G5 202 aa3.09□□□□□ -1.91
PPP4R3A-201ENST00000554308 LCE1CQ5T751 118 aa3.09□□□□□ -1.92
PPP4R3A-201ENST00000554308 GPR98Q8WXG9 6306 aa2.99□□□□□ -1.93
PPP4R3A-201ENST00000554308 KRTAP5-7Q6L8G8 165 aa2.93□□□□□ -1.94
PPP4R3A-201ENST00000554308 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
PPP4R3A-201ENST00000554308 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.85□□□□□ -1.95
PPP4R3A-201ENST00000554308 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
PPP4R3A-201ENST00000554308 KRTAP5-11Q6L8G4 156 aa2.67□□□□□ -1.98
PPP4R3A-201ENST00000554308 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
PPP4R3A-201ENST00000554308 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
PPP4R3A-201ENST00000554308 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
PPP4R3A-201ENST00000554308 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
PPP4R3A-201ENST00000554308 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
PPP4R3A-201ENST00000554308 LCE1FQ5T754 118 aa2.32□□□□□ -2.04
PPP4R3A-201ENST00000554308 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 217.4 ms