RNA–Protein interactions for RNA: ENST00000554226.5

NEDD1-206, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2

Gene NEDD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-206ENST00000554226 LCE3AQ5TA76 89 aa4.56□□□□□ -1.68
NEDD1-206ENST00000554226 A0A0A0MQY5 61 aa4.55□□□□□ -1.68
NEDD1-206ENST00000554226 SYNE1Q8NF91 8797 aaKnown RBP4.53□□□□□ -1.68
NEDD1-206ENST00000554226 AHNAKQ09666 5890 aaKnown RBP4.53□□□□□ -1.68
NEDD1-206ENST00000554226 KRTAP12-1P59990 96 aa4.52□□□□□ -1.69
NEDD1-206ENST00000554226 SPINT4Q6UDR6 99 aa4.52□□□□□ -1.69
NEDD1-206ENST00000554226 MUC5ACP98088 5654 aa4.49□□□□□ -1.69
NEDD1-206ENST00000554226 SPATA8Q6RVD6 105 aa4.47□□□□□ -1.69
NEDD1-206ENST00000554226 MUC5BQ9HC84 5762 aaPredicted RBP4.45□□□□□ -1.7
NEDD1-206ENST00000554226 SPANXA2-OT1Q8N9U9 137 aa4.44□□□□□ -1.7
NEDD1-206ENST00000554226 TNP1P09430 55 aa4.43□□□□□ -1.7
NEDD1-206ENST00000554226 KRTAP12-3P60328 96 aa4.41□□□□□ -1.7
NEDD1-206ENST00000554226 KRTAP5-8O75690 187 aa4.4□□□□□ -1.71
NEDD1-206ENST00000554226 SMIM20Q8N5G0 67 aa4.4□□□□□ -1.71
NEDD1-206ENST00000554226 A0A1B0GU33 70 aa4.38□□□□□ -1.71
NEDD1-206ENST00000554226 SEC61GP60059 68 aa4.38□□□□□ -1.71
NEDD1-206ENST00000554226 SERP1Q9Y6X1 66 aa4.38□□□□□ -1.71
NEDD1-206ENST00000554226 KRTAP5-2Q701N4 177 aa4.37□□□□□ -1.71
NEDD1-206ENST00000554226 SNURFQ9Y675 71 aa4.32□□□□□ -1.72
NEDD1-206ENST00000554226 PCP4L1A6NKN8 68 aa4.3□□□□□ -1.72
NEDD1-206ENST00000554226 COA5Q86WW8 74 aa4.28□□□□□ -1.72
NEDD1-206ENST00000554226 J3QR89 54 aa4.27□□□□□ -1.73
NEDD1-206ENST00000554226 SMIM26A0A096LP01 95 aa4.26□□□□□ -1.73
NEDD1-206ENST00000554226 OBSCNQ5VST9 7968 aa4.25□□□□□ -1.73
NEDD1-206ENST00000554226 A8MU10 97 aa4.2□□□□□ -1.74
NEDD1-206ENST00000554226 MT1AP04731 61 aa4.15□□□□□ -1.75
NEDD1-206ENST00000554226 MT3P25713 68 aa4.14□□□□□ -1.75
NEDD1-206ENST00000554226 KRTAP6-1Q3LI64 71 aa4.13□□□□□ -1.75
NEDD1-206ENST00000554226 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.08□□□□□ -1.76
NEDD1-206ENST00000554226 A0A1B0GU69 56 aa4.07□□□□□ -1.76
NEDD1-206ENST00000554226 A0A1B0GV90 55 aa4.07□□□□□ -1.76
NEDD1-206ENST00000554226 KRTAP5-11Q6L8G4 156 aa4.07□□□□□ -1.76
NEDD1-206ENST00000554226 SERP2Q8N6R1 65 aa4.07□□□□□ -1.76
NEDD1-206ENST00000554226 KRTAP6-2Q3LI66 62 aa4.04□□□□□ -1.76
NEDD1-206ENST00000554226 LCE3CQ5T5A8 94 aa4.02□□□□□ -1.77
NEDD1-206ENST00000554226 KRTAP5-1Q6L8H4 278 aa3.99□□□□□ -1.77
NEDD1-206ENST00000554226 KRTAP25-1Q3LHN0 102 aa3.98□□□□□ -1.77
NEDD1-206ENST00000554226 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
NEDD1-206ENST00000554226 H7BZZ5 65 aa3.87□□□□□ -1.79
NEDD1-206ENST00000554226 K7ERU9 68 aa3.87□□□□□ -1.79
NEDD1-206ENST00000554226 LCE1FQ5T754 118 aa3.87□□□□□ -1.79
NEDD1-206ENST00000554226 PRR15LQ9BU68 103 aa3.83□□□□□ -1.8
NEDD1-206ENST00000554226 KRTAP9-6A8MVA2 160 aa3.82□□□□□ -1.8
NEDD1-206ENST00000554226 COX7CP15954 63 aa3.78□□□□□ -1.8
NEDD1-206ENST00000554226 PRAC1Q96KF2 57 aa3.74□□□□□ -1.81
NEDD1-206ENST00000554226 UQCR11O14957 56 aa3.68□□□□□ -1.82
NEDD1-206ENST00000554226 LINC01558Q9Y6Z2 57 aa3.68□□□□□ -1.82
NEDD1-206ENST00000554226 K7ERS5 55 aa3.55□□□□□ -1.84
NEDD1-206ENST00000554226 NDUFAF8A1L188 74 aa3.54□□□□□ -1.84
NEDD1-206ENST00000554226 MIR22HGQ0VDD5 57 aa3.52□□□□□ -1.85
NEDD1-206ENST00000554226 ATP5EP56381 51 aaPredicted RBP3.48□□□□□ -1.85
NEDD1-206ENST00000554226 RPS28P62857 69 aaKnown RBP3.43□□□□□ -1.86
NEDD1-206ENST00000554226 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
NEDD1-206ENST00000554226 LCE1BQ5T7P3 118 aa3.41□□□□□ -1.86
NEDD1-206ENST00000554226 LCE1CQ5T751 118 aa3.4□□□□□ -1.87
NEDD1-206ENST00000554226 ANAPC13Q9BS18 74 aa3.32□□□□□ -1.88
NEDD1-206ENST00000554226 CDC42SE1Q9NRR8 79 aa3.31□□□□□ -1.88
NEDD1-206ENST00000554226 CCDC179H3BU77 68 aa3.29□□□□□ -1.88
NEDD1-206ENST00000554226 Q1T7F1 81 aa3.28□□□□□ -1.88
NEDD1-206ENST00000554226 LCE3EQ5T5B0 92 aa3.28□□□□□ -1.88
NEDD1-206ENST00000554226 ROMO1P60602 79 aa3.23□□□□□ -1.89
NEDD1-206ENST00000554226 TMEM258P61165 79 aa3.18□□□□□ -1.9
NEDD1-206ENST00000554226 PSPHP1O15172 72 aa3.15□□□□□ -1.91
NEDD1-206ENST00000554226 V9GYY9 64 aa3.12□□□□□ -1.91
NEDD1-206ENST00000554226 PHGR1C9JFL3 82 aa3.1□□□□□ -1.91
NEDD1-206ENST00000554226 A6NED7 52 aa3.01□□□□□ -1.93
NEDD1-206ENST00000554226 LCE3DQ9BYE3 92 aa2.79□□□□□ -1.96
NEDD1-206ENST00000554226 KRTAP21-2Q3LI59 83 aa2.76□□□□□ -1.97
NEDD1-206ENST00000554226 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
NEDD1-206ENST00000554226 KRTAP21-1Q3LI58 79 aa2.37□□□□□ -2.03
NEDD1-206ENST00000554226 PRO0628Q9UI54 55 aa2.03□□□□□ -2.08
NEDD1-206ENST00000554226 LUZP6Q538Z0 58 aa2.02□□□□□ -2.09
NEDD1-206ENST00000554226 BRK1Q8WUW1 75 aa2.02□□□□□ -2.09
NEDD1-206ENST00000554226 PMAIP1Q13794 54 aa1.81□□□□□ -2.12
NEDD1-206ENST00000554226 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
NEDD1-206ENST00000554226 PRM1P04553 51 aa1.6□□□□□ -2.15
NEDD1-206ENST00000554226 KTN1-AS1Q86SY8 53 aa1.46□□□□□ -2.18
NEDD1-206ENST00000554226 INE1O15225 51 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 45 ms