RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 ACYP1P07311 99 aa1.04□□□□□ -2.24
SLIRP-202ENST00000553981 BATFQ16520 125 aa1.04□□□□□ -2.24
SLIRP-202ENST00000553981 UBL5Q9BZL1 73 aa1.04□□□□□ -2.24
SLIRP-202ENST00000553981 DMAC1Q96GE9 116 aa1.02□□□□□ -2.25
SLIRP-202ENST00000553981 LINC00208Q96KT6 92 aa1.02□□□□□ -2.25
SLIRP-202ENST00000553981 UQCRQO14949 82 aa1.01□□□□□ -2.25
SLIRP-202ENST00000553981 C10orf95Q9H7T3 257 aa1.01□□□□□ -2.25
SLIRP-202ENST00000553981 MUC5BQ9HC84 5762 aaPredicted RBP1□□□□□ -2.25
SLIRP-202ENST00000553981 MT-ATP8P03928 68 aa1□□□□□ -2.25
SLIRP-202ENST00000553981 ETDBQ3ZM63 59 aa0.99□□□□□ -2.25
SLIRP-202ENST00000553981 C20orf197Q8N268 126 aa0.99□□□□□ -2.25
SLIRP-202ENST00000553981 MUC5ACP98088 5654 aa0.97□□□□□ -2.25
SLIRP-202ENST00000553981 LOC105371267A0A1B0GV96 52 aa0.97□□□□□ -2.25
SLIRP-202ENST00000553981 ATOX1O00244 68 aa0.97□□□□□ -2.25
SLIRP-202ENST00000553981 KRTAP12-1P59990 96 aa0.97□□□□□ -2.25
SLIRP-202ENST00000553981 HIST1H4AP62805 103 aaKnown RBP0.97□□□□□ -2.25
SLIRP-202ENST00000553981 KRTAP6-1Q3LI64 71 aa0.96□□□□□ -2.26
SLIRP-202ENST00000553981 SMIM6P0DI80 62 aa0.95□□□□□ -2.26
SLIRP-202ENST00000553981 SPATA8Q6RVD6 105 aa0.95□□□□□ -2.26
SLIRP-202ENST00000553981 TRAV7A0A075B6U4 112 aa0.94□□□□□ -2.26
SLIRP-202ENST00000553981 PCP4L1A6NKN8 68 aa0.94□□□□□ -2.26
SLIRP-202ENST00000553981 SMIM26A0A096LP01 95 aa0.92□□□□□ -2.26
SLIRP-202ENST00000553981 F8W1H4 67 aa0.92□□□□□ -2.26
SLIRP-202ENST00000553981 MT1AP04731 61 aa0.92□□□□□ -2.26
SLIRP-202ENST00000553981 MP68P56378 58 aa0.92□□□□□ -2.26
SLIRP-202ENST00000553981 SPINT4Q6UDR6 99 aa0.92□□□□□ -2.26
SLIRP-202ENST00000553981 FAM240AA0A1B0GVK7 77 aa0.91□□□□□ -2.26
SLIRP-202ENST00000553981 ACYP2P14621 99 aa0.91□□□□□ -2.26
SLIRP-202ENST00000553981 KRTAP6-2Q3LI66 62 aa0.91□□□□□ -2.26
SLIRP-202ENST00000553981 COL5A1-AS1Q5SY13 56 aa0.91□□□□□ -2.26
SLIRP-202ENST00000553981 ATP5EP2Q5VTU8 51 aa0.91□□□□□ -2.26
SLIRP-202ENST00000553981 H3BPC8 53 aa0.9□□□□□ -2.27
SLIRP-202ENST00000553981 LINC00643Q86TS7 51 aa0.9□□□□□ -2.27
SLIRP-202ENST00000553981 SPANXA2-OT1Q8N9U9 137 aa0.9□□□□□ -2.27
SLIRP-202ENST00000553981 GTF2H5Q6ZYL4 71 aa0.88□□□□□ -2.27
SLIRP-202ENST00000553981 TNP1P09430 55 aa0.87□□□□□ -2.27
SLIRP-202ENST00000553981 SNURFQ9Y675 71 aa0.87□□□□□ -2.27
SLIRP-202ENST00000553981 CHKB-CPT1BH3BT56 60 aa0.86□□□□□ -2.27
SLIRP-202ENST00000553981 LUZP6Q538Z0 58 aa0.86□□□□□ -2.27
SLIRP-202ENST00000553981 A0A1B0GU33 70 aa0.85□□□□□ -2.27
SLIRP-202ENST00000553981 SPTSSBQ8NFR3 76 aa0.85□□□□□ -2.27
SLIRP-202ENST00000553981 COA5Q86WW8 74 aa0.84□□□□□ -2.27
SLIRP-202ENST00000553981 A0A1B0GV90 55 aa0.81□□□□□ -2.28
SLIRP-202ENST00000553981 SCGB1A1P11684 91 aa0.81□□□□□ -2.28
SLIRP-202ENST00000553981 SERP1Q9Y6X1 66 aa0.8□□□□□ -2.28
SLIRP-202ENST00000553981 KRTAP25-1Q3LHN0 102 aa0.79□□□□□ -2.28
SLIRP-202ENST00000553981 PSPHP1O15172 72 aa0.76□□□□□ -2.29
SLIRP-202ENST00000553981 A0A1B0GU69 56 aa0.75□□□□□ -2.29
SLIRP-202ENST00000553981 H7BZZ5 65 aa0.75□□□□□ -2.29
SLIRP-202ENST00000553981 SERP2Q8N6R1 65 aa0.74□□□□□ -2.29
SLIRP-202ENST00000553981 SMIM20Q8N5G0 67 aa0.73□□□□□ -2.29
SLIRP-202ENST00000553981 LINC01558Q9Y6Z2 57 aa0.7□□□□□ -2.3
SLIRP-202ENST00000553981 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
SLIRP-202ENST00000553981 PHGR1C9JFL3 82 aa0.69□□□□□ -2.3
SLIRP-202ENST00000553981 J3QR89 54 aa0.69□□□□□ -2.3
SLIRP-202ENST00000553981 COX7CP15954 63 aa0.69□□□□□ -2.3
SLIRP-202ENST00000553981 PRO0628Q9UI54 55 aa0.66□□□□□ -2.3
SLIRP-202ENST00000553981 CCDC179H3BU77 68 aa0.64□□□□□ -2.31
SLIRP-202ENST00000553981 UQCR11O14957 56 aa0.64□□□□□ -2.31
SLIRP-202ENST00000553981 MIR22HGQ0VDD5 57 aa0.64□□□□□ -2.31
SLIRP-202ENST00000553981 PRR15LQ9BU68 103 aa0.64□□□□□ -2.31
SLIRP-202ENST00000553981 A6NED7 52 aa0.63□□□□□ -2.31
SLIRP-202ENST00000553981 K7ERU9 68 aa0.63□□□□□ -2.31
SLIRP-202ENST00000553981 K7ERS5 55 aa0.61□□□□□ -2.31
SLIRP-202ENST00000553981 Q1T7F1 81 aa0.6□□□□□ -2.31
SLIRP-202ENST00000553981 V9GYY9 64 aa0.6□□□□□ -2.31
SLIRP-202ENST00000553981 RPS28P62857 69 aaKnown RBP0.58□□□□□ -2.32
SLIRP-202ENST00000553981 ROMO1P60602 79 aa0.57□□□□□ -2.32
SLIRP-202ENST00000553981 ANAPC13Q9BS18 74 aa0.57□□□□□ -2.32
SLIRP-202ENST00000553981 CDC42SE1Q9NRR8 79 aa0.55□□□□□ -2.32
SLIRP-202ENST00000553981 ATP5EP56381 51 aaPredicted RBP0.53□□□□□ -2.32
SLIRP-202ENST00000553981 TMEM258P61165 79 aa0.5□□□□□ -2.33
SLIRP-202ENST00000553981 KRTAP21-1Q3LI58 79 aa0.49□□□□□ -2.33
SLIRP-202ENST00000553981 KTN1-AS1Q86SY8 53 aa0.33□□□□□ -2.36
SLIRP-202ENST00000553981 PRM1P04553 51 aa0.32□□□□□ -2.36
SLIRP-202ENST00000553981 BRK1Q8WUW1 75 aa0.24□□□□□ -2.37
SLIRP-202ENST00000553981 PMAIP1Q13794 54 aa0.2□□□□□ -2.38
SLIRP-202ENST00000553981 INE1O15225 51 aa0.09□□□□□ -2.4
Retrieved 78 of 20,778 RNA–protein pairs in 11 ms