RNA–Protein interactions for RNA: ENST00000553778.6

CFAP54-204, Transcript of cilia and flagella associated protein 54, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene CFAP54, Length 1,967 nt, Biotype non stop decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-204ENST00000553778 FCGBPQ9Y6R7 5405 aaPredicted RBP3.95□□□□□ -1.78
CFAP54-204ENST00000553778 KRTAP4-2Q9BYR5 136 aa3.94□□□□□ -1.78
CFAP54-204ENST00000553778 LCE1DQ5T752 114 aa3.91□□□□□ -1.78
CFAP54-204ENST00000553778 KRTAP10-5P60370 271 aa3.91□□□□□ -1.78
CFAP54-204ENST00000553778 KRTAP10-12P60413 245 aa3.91□□□□□ -1.78
CFAP54-204ENST00000553778 LCE5AQ5TCM9 118 aa3.89□□□□□ -1.79
CFAP54-204ENST00000553778 KRTAP12-3P60328 96 aa3.85□□□□□ -1.79
CFAP54-204ENST00000553778 MACF1Q9UPN3 7388 aaKnown RBP3.85□□□□□ -1.79
CFAP54-204ENST00000553778 KRTAP4-9Q9BYQ8 210 aa3.84□□□□□ -1.79
CFAP54-204ENST00000553778 MT1XP80297 61 aa3.82□□□□□ -1.8
CFAP54-204ENST00000553778 SYNE2Q8WXH0 6885 aaKnown RBP3.76□□□□□ -1.81
CFAP54-204ENST00000553778 KRTAP6-3Q3LI67 103 aa3.71□□□□□ -1.82
CFAP54-204ENST00000553778 KRTAP4-11Q9BYQ6 195 aa3.71□□□□□ -1.82
CFAP54-204ENST00000553778 KRTAP2-3P0C7H8 128 aa3.67□□□□□ -1.82
CFAP54-204ENST00000553778 LCE3CQ5T5A8 94 aa3.67□□□□□ -1.82
CFAP54-204ENST00000553778 KRTAP2-4Q9BYR9 128 aa3.67□□□□□ -1.82
CFAP54-204ENST00000553778 KRTAP2-1Q9BYU5 128 aa3.67□□□□□ -1.82
CFAP54-204ENST00000553778 KRTAP10-7P60409 375 aaPredicted RBP3.66□□□□□ -1.82
CFAP54-204ENST00000553778 KMT2DO14686 5537 aa3.64□□□□□ -1.83
CFAP54-204ENST00000553778 KRTAP5-9P26371 169 aa3.61□□□□□ -1.83
CFAP54-204ENST00000553778 SPRR2FQ96RM1 72 aa3.56□□□□□ -1.84
CFAP54-204ENST00000553778 MUC12Q9UKN1 5478 aa3.56□□□□□ -1.84
CFAP54-204ENST00000553778 KRTAP9-6A8MVA2 160 aa3.51□□□□□ -1.85
CFAP54-204ENST00000553778 KRTAP19-5Q3LI72 72 aa3.48□□□□□ -1.85
CFAP54-204ENST00000553778 SPRR2EP22531 72 aa3.47□□□□□ -1.85
CFAP54-204ENST00000553778 SPRR2BP35325 72 aa3.47□□□□□ -1.85
CFAP54-204ENST00000553778 SPRR2AP35326 72 aa3.47□□□□□ -1.85
CFAP54-204ENST00000553778 MDN1Q9NU22 5596 aa3.47□□□□□ -1.85
CFAP54-204ENST00000553778 NEBP20929 6669 aa3.46□□□□□ -1.86
CFAP54-204ENST00000553778 HMCN1Q96RW7 5635 aa3.45□□□□□ -1.86
CFAP54-204ENST00000553778 LCE1AQ5T7P2 110 aa3.43□□□□□ -1.86
CFAP54-204ENST00000553778 KRTAP19-7Q3SYF9 63 aa3.41□□□□□ -1.86
CFAP54-204ENST00000553778 MT1EP04732 61 aa3.38□□□□□ -1.87
CFAP54-204ENST00000553778 SPRR2DP22532 72 aa3.35□□□□□ -1.87
CFAP54-204ENST00000553778 KRTAP20-1Q3LI63 56 aa3.35□□□□□ -1.87
CFAP54-204ENST00000553778 KRTAP19-3Q7Z4W3 81 aa3.32□□□□□ -1.88
CFAP54-204ENST00000553778 MT1GP13640 62 aa3.28□□□□□ -1.88
CFAP54-204ENST00000553778 KRTAP12-4P60329 112 aa3.27□□□□□ -1.89
CFAP54-204ENST00000553778 MT1LQ93083 61 aa3.26□□□□□ -1.89
CFAP54-204ENST00000553778 KRTAP2-2Q9BYT5 123 aa3.23□□□□□ -1.89
CFAP54-204ENST00000553778 DSTQ03001 7570 aaKnown RBP3.21□□□□□ -1.9
CFAP54-204ENST00000553778 MT1MQ8N339 61 aa3.2□□□□□ -1.9
CFAP54-204ENST00000553778 KRTAP4-3Q9BYR4 195 aa3.11□□□□□ -1.91
CFAP54-204ENST00000553778 MT1AP04731 61 aa3.03□□□□□ -1.92
CFAP54-204ENST00000553778 LCE1FQ5T754 118 aa3.03□□□□□ -1.92
CFAP54-204ENST00000553778 MT3P25713 68 aa2.97□□□□□ -1.93
CFAP54-204ENST00000553778 PRM1P04553 51 aa2.93□□□□□ -1.94
CFAP54-204ENST00000553778 KRTAP5-4Q6L8H1 288 aa2.93□□□□□ -1.94
CFAP54-204ENST00000553778 MT4P47944 62 aa2.92□□□□□ -1.94
CFAP54-204ENST00000553778 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
CFAP54-204ENST00000553778 KRTAP5-5Q701N2 237 aaPredicted RBP2.91□□□□□ -1.94
CFAP54-204ENST00000553778 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
CFAP54-204ENST00000553778 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.87□□□□□ -1.95
CFAP54-204ENST00000553778 SYNE1Q8NF91 8797 aaKnown RBP2.8□□□□□ -1.96
CFAP54-204ENST00000553778 KRTAP20-2Q3LI61 65 aa2.76□□□□□ -1.97
CFAP54-204ENST00000553778 KRTAP6-1Q3LI64 71 aa2.75□□□□□ -1.97
CFAP54-204ENST00000553778 KRTAP6-2Q3LI66 62 aa2.71□□□□□ -1.98
CFAP54-204ENST00000553778 AHNAK2Q8IVF2 5795 aa2.61□□□□□ -1.99
CFAP54-204ENST00000553778 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
CFAP54-204ENST00000553778 KRTAP5-10Q6L8G5 202 aa2.59□□□□□ -2
CFAP54-204ENST00000553778 GPR98Q8WXG9 6306 aa2.57□□□□□ -2
CFAP54-204ENST00000553778 LCE1EQ5T753 118 aa2.56□□□□□ -2
CFAP54-204ENST00000553778 KRTAP5-11Q6L8G4 156 aa2.55□□□□□ -2
CFAP54-204ENST00000553778 KRTAP5-7Q6L8G8 165 aa2.47□□□□□ -2.01
CFAP54-204ENST00000553778 OBSCNQ5VST9 7968 aa2.44□□□□□ -2.02
CFAP54-204ENST00000553778 KRTAP5-8O75690 187 aa2.39□□□□□ -2.03
CFAP54-204ENST00000553778 KRTAP5-1Q6L8H4 278 aa2.39□□□□□ -2.03
CFAP54-204ENST00000553778 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
CFAP54-204ENST00000553778 MUC5ACP98088 5654 aa2.19□□□□□ -2.06
CFAP54-204ENST00000553778 LCE1BQ5T7P3 118 aa2.15□□□□□ -2.07
CFAP54-204ENST00000553778 MUC5BQ9HC84 5762 aaPredicted RBP2.13□□□□□ -2.07
CFAP54-204ENST00000553778 LCE1CQ5T751 118 aa2.13□□□□□ -2.07
CFAP54-204ENST00000553778 AHNAKQ09666 5890 aaKnown RBP2.05□□□□□ -2.08
CFAP54-204ENST00000553778 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
CFAP54-204ENST00000553778 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
CFAP54-204ENST00000553778 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
CFAP54-204ENST00000553778 MUC19Q7Z5P9 8384 aa1.54□□□□□ -2.16
CFAP54-204ENST00000553778 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 80.3 ms