RNA–Protein interactions for RNA: ENST00000553609.5

NEDD1-205, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-205ENST00000553609 SPATA8Q6RVD6 105 aa4.76□□□□□ -1.65
NEDD1-205ENST00000553609 SPINT4Q6UDR6 99 aa4.76□□□□□ -1.65
NEDD1-205ENST00000553609 KRTAP5-5Q701N2 237 aaPredicted RBP4.75□□□□□ -1.65
NEDD1-205ENST00000553609 SPANXA2-OT1Q8N9U9 137 aa4.71□□□□□ -1.66
NEDD1-205ENST00000553609 SNURFQ9Y675 71 aa4.71□□□□□ -1.66
NEDD1-205ENST00000553609 SMIM20Q8N5G0 67 aa4.69□□□□□ -1.66
NEDD1-205ENST00000553609 KRTAP5-11Q6L8G4 156 aa4.67□□□□□ -1.66
NEDD1-205ENST00000553609 J3QR89 54 aa4.64□□□□□ -1.67
NEDD1-205ENST00000553609 SYNE1Q8NF91 8797 aaKnown RBP4.63□□□□□ -1.67
NEDD1-205ENST00000553609 A0A1B0GU33 70 aa4.63□□□□□ -1.67
NEDD1-205ENST00000553609 KRTAP12-4P60329 112 aa4.63□□□□□ -1.67
NEDD1-205ENST00000553609 SVIPQ8NHG7 77 aa4.62□□□□□ -1.67
NEDD1-205ENST00000553609 SERP1Q9Y6X1 66 aa4.62□□□□□ -1.67
NEDD1-205ENST00000553609 A0A1B0GV90 55 aa4.61□□□□□ -1.67
NEDD1-205ENST00000553609 COA5Q86WW8 74 aa4.61□□□□□ -1.67
NEDD1-205ENST00000553609 TNP1P09430 55 aa4.6□□□□□ -1.67
NEDD1-205ENST00000553609 SEC61GP60059 68 aa4.6□□□□□ -1.67
NEDD1-205ENST00000553609 KRTAP12-3P60328 96 aa4.57□□□□□ -1.68
NEDD1-205ENST00000553609 LCE1EQ5T753 118 aa4.55□□□□□ -1.68
NEDD1-205ENST00000553609 A8MU10 97 aa4.52□□□□□ -1.69
NEDD1-205ENST00000553609 SMIM26A0A096LP01 95 aa4.48□□□□□ -1.69
NEDD1-205ENST00000553609 AHNAKQ09666 5890 aaKnown RBP4.48□□□□□ -1.69
NEDD1-205ENST00000553609 MUC5ACP98088 5654 aa4.46□□□□□ -1.69
NEDD1-205ENST00000553609 MUC5BQ9HC84 5762 aaPredicted RBP4.46□□□□□ -1.7
NEDD1-205ENST00000553609 KRTAP5-2Q701N4 177 aa4.43□□□□□ -1.7
NEDD1-205ENST00000553609 SERP2Q8N6R1 65 aa4.43□□□□□ -1.7
NEDD1-205ENST00000553609 KRTAP5-8O75690 187 aa4.39□□□□□ -1.71
NEDD1-205ENST00000553609 MT3P25713 68 aa4.36□□□□□ -1.71
NEDD1-205ENST00000553609 A0A1B0GU69 56 aa4.34□□□□□ -1.71
NEDD1-205ENST00000553609 K7ERU9 68 aa4.29□□□□□ -1.72
NEDD1-205ENST00000553609 KRTAP6-1Q3LI64 71 aa4.27□□□□□ -1.73
NEDD1-205ENST00000553609 MT1AP04731 61 aa4.26□□□□□ -1.73
NEDD1-205ENST00000553609 H7BZZ5 65 aa4.24□□□□□ -1.73
NEDD1-205ENST00000553609 COX7CP15954 63 aa4.17□□□□□ -1.74
NEDD1-205ENST00000553609 LCE3CQ5T5A8 94 aa4.17□□□□□ -1.74
NEDD1-205ENST00000553609 OBSCNQ5VST9 7968 aa4.16□□□□□ -1.74
NEDD1-205ENST00000553609 KRTAP25-1Q3LHN0 102 aa4.15□□□□□ -1.75
NEDD1-205ENST00000553609 KRTAP6-2Q3LI66 62 aa4.15□□□□□ -1.75
NEDD1-205ENST00000553609 PCP4P48539 62 aa4.14□□□□□ -1.75
NEDD1-205ENST00000553609 KRTAP5-1Q6L8H4 278 aa4.12□□□□□ -1.75
NEDD1-205ENST00000553609 A0A0A0MQY5 61 aa4.1□□□□□ -1.75
NEDD1-205ENST00000553609 PRR15LQ9BU68 103 aa4.05□□□□□ -1.76
NEDD1-205ENST00000553609 KRTAP9-6A8MVA2 160 aa4.02□□□□□ -1.77
NEDD1-205ENST00000553609 LINC01558Q9Y6Z2 57 aa3.99□□□□□ -1.77
NEDD1-205ENST00000553609 UQCR11O14957 56 aa3.94□□□□□ -1.78
NEDD1-205ENST00000553609 KRTAP4-4Q9BYR3 166 aa3.94□□□□□ -1.78
NEDD1-205ENST00000553609 MIR22HGQ0VDD5 57 aa3.82□□□□□ -1.8
NEDD1-205ENST00000553609 ATP5EP56381 51 aaPredicted RBP3.8□□□□□ -1.8
NEDD1-205ENST00000553609 CCDC179H3BU77 68 aa3.76□□□□□ -1.81
NEDD1-205ENST00000553609 K7ERS5 55 aa3.76□□□□□ -1.81
NEDD1-205ENST00000553609 ANAPC13Q9BS18 74 aa3.75□□□□□ -1.81
NEDD1-205ENST00000553609 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
NEDD1-205ENST00000553609 RPS28P62857 69 aaKnown RBP3.61□□□□□ -1.83
NEDD1-205ENST00000553609 CDC42SE1Q9NRR8 79 aa3.56□□□□□ -1.84
NEDD1-205ENST00000553609 TMEM258P61165 79 aa3.55□□□□□ -1.84
NEDD1-205ENST00000553609 Q1T7F1 81 aa3.55□□□□□ -1.84
NEDD1-205ENST00000553609 PSPHP1O15172 72 aa3.52□□□□□ -1.85
NEDD1-205ENST00000553609 ROMO1P60602 79 aa3.49□□□□□ -1.85
NEDD1-205ENST00000553609 LCE1BQ5T7P3 118 aa3.47□□□□□ -1.85
NEDD1-205ENST00000553609 LCE1CQ5T751 118 aa3.43□□□□□ -1.86
NEDD1-205ENST00000553609 V9GYY9 64 aa3.4□□□□□ -1.87
NEDD1-205ENST00000553609 A6NED7 52 aa3.34□□□□□ -1.87
NEDD1-205ENST00000553609 PRAC1Q96KF2 57 aa3.34□□□□□ -1.87
NEDD1-205ENST00000553609 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
NEDD1-205ENST00000553609 NDUFAF8A1L188 74 aa3.16□□□□□ -1.9
NEDD1-205ENST00000553609 PHGR1C9JFL3 82 aa3.02□□□□□ -1.93
NEDD1-205ENST00000553609 LCE3DQ9BYE3 92 aa2.9□□□□□ -1.95
NEDD1-205ENST00000553609 KRTAP21-2Q3LI59 83 aa2.84□□□□□ -1.95
NEDD1-205ENST00000553609 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
NEDD1-205ENST00000553609 BRK1Q8WUW1 75 aa2.34□□□□□ -2.03
NEDD1-205ENST00000553609 KRTAP21-1Q3LI58 79 aa2.29□□□□□ -2.04
NEDD1-205ENST00000553609 PMAIP1Q13794 54 aa2.16□□□□□ -2.06
NEDD1-205ENST00000553609 LUZP6Q538Z0 58 aa1.9□□□□□ -2.11
NEDD1-205ENST00000553609 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
NEDD1-205ENST00000553609 PRM1P04553 51 aa1.77□□□□□ -2.13
NEDD1-205ENST00000553609 PRO0628Q9UI54 55 aa1.65□□□□□ -2.15
NEDD1-205ENST00000553609 KTN1-AS1Q86SY8 53 aa1.64□□□□□ -2.15
NEDD1-205ENST00000553609 INE1O15225 51 aa0.89□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 36.2 ms