RNA–Protein interactions for RNA: ENST00000553521.5

SRSF5-203, Transcript of serine and arginine rich splicing factor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF5, Length 2,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-203ENST00000553521 SPRR2FQ96RM1 72 aa5.26□□□□□ -1.57
SRSF5-203ENST00000553521 KRTAP9-6A0A140TA67 174 aa5.24□□□□□ -1.57
SRSF5-203ENST00000553521 KRTAP19-3Q7Z4W3 81 aa5.24□□□□□ -1.57
SRSF5-203ENST00000553521 MT1GP13640 62 aa5.22□□□□□ -1.57
SRSF5-203ENST00000553521 KRTAP4-7Q9BYR0 210 aa5.2□□□□□ -1.58
SRSF5-203ENST00000553521 KRTAP5-9P26371 169 aa5.17□□□□□ -1.58
SRSF5-203ENST00000553521 MT1MQ8N339 61 aa5.14□□□□□ -1.59
SRSF5-203ENST00000553521 LCE5AQ5TCM9 118 aa5.13□□□□□ -1.59
SRSF5-203ENST00000553521 MUC12Q9UKN1 5478 aa5.13□□□□□ -1.59
SRSF5-203ENST00000553521 KRTAP9-6A8MVA2 160 aa5.09□□□□□ -1.59
SRSF5-203ENST00000553521 SYNE2Q8WXH0 6885 aaKnown RBP5.07□□□□□ -1.6
SRSF5-203ENST00000553521 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.06□□□□□ -1.6
SRSF5-203ENST00000553521 KRTAP6-3Q3LI67 103 aa5.02□□□□□ -1.61
SRSF5-203ENST00000553521 KRTAP4-3Q9BYR4 195 aa5.02□□□□□ -1.61
SRSF5-203ENST00000553521 LCE1AQ5T7P2 110 aa5.01□□□□□ -1.61
SRSF5-203ENST00000553521 SPRR2EP22531 72 aa4.96□□□□□ -1.62
SRSF5-203ENST00000553521 SPRR2BP35325 72 aa4.96□□□□□ -1.62
SRSF5-203ENST00000553521 SPRR2AP35326 72 aa4.96□□□□□ -1.62
SRSF5-203ENST00000553521 MDN1Q9NU22 5596 aa4.89□□□□□ -1.63
SRSF5-203ENST00000553521 LOC100996750A0A140TA64 210 aa4.88□□□□□ -1.63
SRSF5-203ENST00000553521 KRTAP2-2Q9BYT5 123 aa4.85□□□□□ -1.63
SRSF5-203ENST00000553521 LCE4AQ5TA78 99 aa4.84□□□□□ -1.63
SRSF5-203ENST00000553521 KRTAP2-3P0C7H8 128 aa4.79□□□□□ -1.64
SRSF5-203ENST00000553521 KRTAP2-4Q9BYR9 128 aa4.79□□□□□ -1.64
SRSF5-203ENST00000553521 KRTAP2-1Q9BYU5 128 aa4.79□□□□□ -1.64
SRSF5-203ENST00000553521 SPRR2DP22532 72 aa4.77□□□□□ -1.65
SRSF5-203ENST00000553521 KRTAP9-7A8MTY7 169 aa4.75□□□□□ -1.65
SRSF5-203ENST00000553521 DSTQ03001 7570 aaKnown RBP4.73□□□□□ -1.65
SRSF5-203ENST00000553521 KRTAP9-4Q9BYQ2 154 aa4.65□□□□□ -1.66
SRSF5-203ENST00000553521 KRTAP5-5Q701N2 237 aaPredicted RBP4.62□□□□□ -1.67
SRSF5-203ENST00000553521 NEBP20929 6669 aa4.6□□□□□ -1.67
SRSF5-203ENST00000553521 MT1AP04731 61 aa4.58□□□□□ -1.68
SRSF5-203ENST00000553521 LCE1FQ5T754 118 aa4.58□□□□□ -1.68
SRSF5-203ENST00000553521 LCE3BQ5TA77 95 aa4.57□□□□□ -1.68
SRSF5-203ENST00000553521 KRTAP9-9Q9BYP9 154 aa4.55□□□□□ -1.68
SRSF5-203ENST00000553521 KRTAP4-6Q9BYQ5 205 aa4.55□□□□□ -1.68
SRSF5-203ENST00000553521 KRTAP6-1Q3LI64 71 aa4.52□□□□□ -1.69
SRSF5-203ENST00000553521 LCE1EQ5T753 118 aa4.44□□□□□ -1.7
SRSF5-203ENST00000553521 KRTAP4-12Q9BQ66 201 aa4.43□□□□□ -1.7
SRSF5-203ENST00000553521 KRTAP5-4Q6L8H1 288 aa4.36□□□□□ -1.71
SRSF5-203ENST00000553521 SYNE1Q8NF91 8797 aaKnown RBP4.33□□□□□ -1.72
SRSF5-203ENST00000553521 KRTAP12-4P60329 112 aa4.28□□□□□ -1.72
SRSF5-203ENST00000553521 LCE1DQ5T752 114 aa4.24□□□□□ -1.73
SRSF5-203ENST00000553521 KRTAP20-1Q3LI63 56 aa4.22□□□□□ -1.73
SRSF5-203ENST00000553521 KRTAP4-9Q9BYQ8 210 aa4.17□□□□□ -1.74
SRSF5-203ENST00000553521 MT3P25713 68 aa4.16□□□□□ -1.74
SRSF5-203ENST00000553521 KRTAP6-2Q3LI66 62 aa4.14□□□□□ -1.75
SRSF5-203ENST00000553521 MT4P47944 62 aa4.13□□□□□ -1.75
SRSF5-203ENST00000553521 LCE3DQ9BYE3 92 aa4.09□□□□□ -1.75
SRSF5-203ENST00000553521 KRTAP20-2Q3LI61 65 aa4.06□□□□□ -1.76
SRSF5-203ENST00000553521 LCE3EQ5T5B0 92 aa4.02□□□□□ -1.77
SRSF5-203ENST00000553521 KRTAP5-2Q701N4 177 aa3.98□□□□□ -1.77
SRSF5-203ENST00000553521 HMCN1Q96RW7 5635 aa3.94□□□□□ -1.78
SRSF5-203ENST00000553521 KRTAP5-3Q6L8H2 238 aa3.91□□□□□ -1.78
SRSF5-203ENST00000553521 OBSCNQ5VST9 7968 aa3.76□□□□□ -1.81
SRSF5-203ENST00000553521 KRTAP4-11Q9BYQ6 195 aa3.74□□□□□ -1.81
SRSF5-203ENST00000553521 KRTAP4-2Q9BYR5 136 aa3.67□□□□□ -1.82
SRSF5-203ENST00000553521 PRM1P04553 51 aa3.52□□□□□ -1.85
SRSF5-203ENST00000553521 AHNAK2Q8IVF2 5795 aa3.42□□□□□ -1.86
SRSF5-203ENST00000553521 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
SRSF5-203ENST00000553521 KRTAP5-10Q6L8G5 202 aa3.37□□□□□ -1.87
SRSF5-203ENST00000553521 GPR98Q8WXG9 6306 aa3.35□□□□□ -1.87
SRSF5-203ENST00000553521 KRTAP5-8O75690 187 aa3.35□□□□□ -1.87
SRSF5-203ENST00000553521 LCE1CQ5T751 118 aa3.34□□□□□ -1.88
SRSF5-203ENST00000553521 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.88
SRSF5-203ENST00000553521 MUC5ACP98088 5654 aa3.31□□□□□ -1.88
SRSF5-203ENST00000553521 KRTAP5-7Q6L8G8 165 aa3.29□□□□□ -1.88
SRSF5-203ENST00000553521 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.14□□□□□ -1.91
SRSF5-203ENST00000553521 MUC19Q7Z5P9 8384 aa3.06□□□□□ -1.92
SRSF5-203ENST00000553521 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.94
SRSF5-203ENST00000553521 KRTAP5-11Q6L8G4 156 aa2.92□□□□□ -1.94
SRSF5-203ENST00000553521 MUC5BQ9HC84 5762 aaPredicted RBP2.9□□□□□ -1.94
SRSF5-203ENST00000553521 AHNAKQ09666 5890 aaKnown RBP2.67□□□□□ -1.98
SRSF5-203ENST00000553521 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
SRSF5-203ENST00000553521 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
SRSF5-203ENST00000553521 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
SRSF5-203ENST00000553521 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 5.6 ms