RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 PSPHP1O15172 72 aa6.83□□□□□ -1.32
CPSF2-202ENST00000553427 PCP4P48539 62 aa6.8□□□□□ -1.32
CPSF2-202ENST00000553427 KRTAP19-5Q3LI72 72 aa6.79□□□□□ -1.32
CPSF2-202ENST00000553427 LCE1DQ5T752 114 aa6.78□□□□□ -1.32
CPSF2-202ENST00000553427 KRTAP2-2Q9BYT5 123 aa6.78□□□□□ -1.32
CPSF2-202ENST00000553427 KRTAP2-1Q9BYU5 128 aa6.78□□□□□ -1.32
CPSF2-202ENST00000553427 LCE5AQ5TCM9 118 aa6.77□□□□□ -1.33
CPSF2-202ENST00000553427 KRTAP19-3Q7Z4W3 81 aa6.77□□□□□ -1.33
CPSF2-202ENST00000553427 RPS28P62857 69 aaKnown RBP6.76□□□□□ -1.33
CPSF2-202ENST00000553427 LCE3AQ5TA76 89 aa6.74□□□□□ -1.33
CPSF2-202ENST00000553427 SVIPQ8NHG7 77 aa6.74□□□□□ -1.33
CPSF2-202ENST00000553427 K7ERS5 55 aa6.72□□□□□ -1.33
CPSF2-202ENST00000553427 MT1GP13640 62 aa6.64□□□□□ -1.35
CPSF2-202ENST00000553427 A6NED7 52 aa6.63□□□□□ -1.35
CPSF2-202ENST00000553427 KRTAP25-1Q3LHN0 102 aa6.62□□□□□ -1.35
CPSF2-202ENST00000553427 MT1LQ93083 61 aa6.59□□□□□ -1.35
CPSF2-202ENST00000553427 PP632Q6XCG6 107 aa6.58□□□□□ -1.36
CPSF2-202ENST00000553427 KRTAP4-7Q9BYR0 210 aa6.55□□□□□ -1.36
CPSF2-202ENST00000553427 DSTQ03001 7570 aaKnown RBP6.55□□□□□ -1.36
CPSF2-202ENST00000553427 MT1MQ8N339 61 aa6.52□□□□□ -1.37
CPSF2-202ENST00000553427 KRTAP4-9Q9BYQ8 210 aa6.52□□□□□ -1.37
CPSF2-202ENST00000553427 KRTAP12-3P60328 96 aa6.51□□□□□ -1.37
CPSF2-202ENST00000553427 KRTAP15-1Q3LI76 137 aa6.46□□□□□ -1.38
CPSF2-202ENST00000553427 CDC42SE1Q9NRR8 79 aa6.41□□□□□ -1.38
CPSF2-202ENST00000553427 KRTAP4-11Q9BYQ6 195 aa6.35□□□□□ -1.39
CPSF2-202ENST00000553427 ROMO1P60602 79 aa6.31□□□□□ -1.4
CPSF2-202ENST00000553427 KRTAP4-3Q9BYR4 195 aa6.29□□□□□ -1.4
CPSF2-202ENST00000553427 KRTAP4-2Q9BYR5 136 aa6.25□□□□□ -1.41
CPSF2-202ENST00000553427 GPR98Q8WXG9 6306 aa6.19□□□□□ -1.42
CPSF2-202ENST00000553427 KRTAP5-4Q6L8H1 288 aa6.13□□□□□ -1.43
CPSF2-202ENST00000553427 HMCN1Q96RW7 5635 aa6.11□□□□□ -1.43
CPSF2-202ENST00000553427 A0A0A0MQY5 61 aa6.02□□□□□ -1.45
CPSF2-202ENST00000553427 MT4P47944 62 aa6.01□□□□□ -1.45
CPSF2-202ENST00000553427 LCE3CQ5T5A8 94 aa6.01□□□□□ -1.45
CPSF2-202ENST00000553427 KRTAP5-5Q701N2 237 aaPredicted RBP5.99□□□□□ -1.45
CPSF2-202ENST00000553427 BRK1Q8WUW1 75 aa5.9□□□□□ -1.46
CPSF2-202ENST00000553427 AHNAK2Q8IVF2 5795 aa5.84□□□□□ -1.47
CPSF2-202ENST00000553427 SPRR5A0A1B0GTR4 108 aa5.77□□□□□ -1.49
CPSF2-202ENST00000553427 KRTAP12-4P60329 112 aa5.75□□□□□ -1.49
CPSF2-202ENST00000553427 KRTAP20-2Q3LI61 65 aa5.74□□□□□ -1.49
CPSF2-202ENST00000553427 SYNE1Q8NF91 8797 aaKnown RBP5.73□□□□□ -1.49
CPSF2-202ENST00000553427 KRTAP9-6A8MVA2 160 aa5.66□□□□□ -1.5
CPSF2-202ENST00000553427 MT1AP04731 61 aa5.63□□□□□ -1.51
CPSF2-202ENST00000553427 KRTAP5-10Q6L8G5 202 aa5.57□□□□□ -1.52
CPSF2-202ENST00000553427 KRTAP5-3Q6L8H2 238 aa5.57□□□□□ -1.52
CPSF2-202ENST00000553427 PMAIP1Q13794 54 aa5.56□□□□□ -1.52
CPSF2-202ENST00000553427 KRTAP6-1Q3LI64 71 aa5.55□□□□□ -1.52
CPSF2-202ENST00000553427 KRTAP5-2Q701N4 177 aa5.42□□□□□ -1.54
CPSF2-202ENST00000553427 KRTAP5-7Q6L8G8 165 aa5.38□□□□□ -1.55
CPSF2-202ENST00000553427 PRO0628Q9UI54 55 aa5.35□□□□□ -1.55
CPSF2-202ENST00000553427 PRAC1Q96KF2 57 aa5.29□□□□□ -1.56
CPSF2-202ENST00000553427 KRTAP6-2Q3LI66 62 aa5.26□□□□□ -1.57
CPSF2-202ENST00000553427 MT3P25713 68 aa5.13□□□□□ -1.59
CPSF2-202ENST00000553427 KTN1-AS1Q86SY8 53 aa5.07□□□□□ -1.6
CPSF2-202ENST00000553427 KRTAP5-8O75690 187 aa5□□□□□ -1.61
CPSF2-202ENST00000553427 OBSCNQ5VST9 7968 aa4.97□□□□□ -1.61
CPSF2-202ENST00000553427 MUC5ACP98088 5654 aa4.83□□□□□ -1.64
CPSF2-202ENST00000553427 MUC5BQ9HC84 5762 aaPredicted RBP4.8□□□□□ -1.64
CPSF2-202ENST00000553427 AHNAKQ09666 5890 aaKnown RBP4.79□□□□□ -1.64
CPSF2-202ENST00000553427 KRTAP5-1Q6L8H4 278 aa4.79□□□□□ -1.64
CPSF2-202ENST00000553427 NDUFAF8A1L188 74 aa4.78□□□□□ -1.64
CPSF2-202ENST00000553427 LCE1EQ5T753 118 aa4.7□□□□□ -1.66
CPSF2-202ENST00000553427 LCE1FQ5T754 118 aa4.58□□□□□ -1.68
CPSF2-202ENST00000553427 LUZP6Q538Z0 58 aa4.48□□□□□ -1.69
CPSF2-202ENST00000553427 LCE3DQ9BYE3 92 aa4.37□□□□□ -1.71
CPSF2-202ENST00000553427 LCE1CQ5T751 118 aa4.35□□□□□ -1.71
CPSF2-202ENST00000553427 LCE1BQ5T7P3 118 aa4.35□□□□□ -1.71
CPSF2-202ENST00000553427 KRTAP5-11Q6L8G4 156 aa4.28□□□□□ -1.72
CPSF2-202ENST00000553427 LCE3EQ5T5B0 92 aa4.15□□□□□ -1.75
CPSF2-202ENST00000553427 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.01□□□□□ -1.77
CPSF2-202ENST00000553427 KRTAP21-2Q3LI59 83 aa3.67□□□□□ -1.82
CPSF2-202ENST00000553427 PHGR1C9JFL3 82 aa3.37□□□□□ -1.87
CPSF2-202ENST00000553427 KRTAP4-4Q9BYR3 166 aa3.37□□□□□ -1.87
CPSF2-202ENST00000553427 INE1O15225 51 aa3.31□□□□□ -1.88
CPSF2-202ENST00000553427 PRM1P04553 51 aa3.21□□□□□ -1.9
CPSF2-202ENST00000553427 MUC19Q7Z5P9 8384 aa3.06□□□□□ -1.92
CPSF2-202ENST00000553427 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
CPSF2-202ENST00000553427 MUC16Q8WXI7 14507 aa2.23□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 99.4 ms