RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 PP632Q6XCG6 107 aa4.67□□□□□ -1.66
ACTN1-207ENST00000553290 C10orf95Q9H7T3 257 aa4.65□□□□□ -1.67
ACTN1-207ENST00000553290 LINC01558Q9Y6Z2 57 aa4.65□□□□□ -1.67
ACTN1-207ENST00000553290 DSTQ03001 7570 aaKnown RBP4.63□□□□□ -1.67
ACTN1-207ENST00000553290 LCE3AQ5TA76 89 aa4.62□□□□□ -1.67
ACTN1-207ENST00000553290 CDC42SE1Q9NRR8 79 aa4.62□□□□□ -1.67
ACTN1-207ENST00000553290 PSPHP1O15172 72 aa4.61□□□□□ -1.67
ACTN1-207ENST00000553290 MT1LQ93083 61 aa4.61□□□□□ -1.67
ACTN1-207ENST00000553290 MT1MQ8N339 61 aa4.59□□□□□ -1.67
ACTN1-207ENST00000553290 KRTAP4-9Q9BYQ8 210 aa4.58□□□□□ -1.68
ACTN1-207ENST00000553290 UQCR11O14957 56 aa4.55□□□□□ -1.68
ACTN1-207ENST00000553290 A6NED7 52 aa4.52□□□□□ -1.69
ACTN1-207ENST00000553290 LCE4AQ5TA78 99 aa4.5□□□□□ -1.69
ACTN1-207ENST00000553290 LCE1DQ5T752 114 aa4.48□□□□□ -1.69
ACTN1-207ENST00000553290 GPR98Q8WXG9 6306 aa4.48□□□□□ -1.69
ACTN1-207ENST00000553290 KRTAP12-3P60328 96 aa4.46□□□□□ -1.7
ACTN1-207ENST00000553290 KRTAP4-3Q9BYR4 195 aa4.45□□□□□ -1.7
ACTN1-207ENST00000553290 MIR22HGQ0VDD5 57 aa4.44□□□□□ -1.7
ACTN1-207ENST00000553290 MT4P47944 62 aa4.42□□□□□ -1.7
ACTN1-207ENST00000553290 KRTAP5-4Q6L8H1 288 aa4.4□□□□□ -1.71
ACTN1-207ENST00000553290 KRTAP25-1Q3LHN0 102 aa4.39□□□□□ -1.71
ACTN1-207ENST00000553290 K7ERS5 55 aa4.38□□□□□ -1.71
ACTN1-207ENST00000553290 HMCN1Q96RW7 5635 aa4.37□□□□□ -1.71
ACTN1-207ENST00000553290 KRTAP4-7Q9BYR0 210 aa4.36□□□□□ -1.71
ACTN1-207ENST00000553290 H3BS24 57 aa4.35□□□□□ -1.71
ACTN1-207ENST00000553290 KRTAP4-6Q9BYQ5 205 aa4.29□□□□□ -1.72
ACTN1-207ENST00000553290 KRTAP19-4Q3LI73 84 aa4.26□□□□□ -1.73
ACTN1-207ENST00000553290 KRTAP23-1A1A580 65 aa4.25□□□□□ -1.73
ACTN1-207ENST00000553290 PRAC1Q96KF2 57 aa4.25□□□□□ -1.73
ACTN1-207ENST00000553290 KRTAP5-5Q701N2 237 aaPredicted RBP4.21□□□□□ -1.74
ACTN1-207ENST00000553290 AHNAK2Q8IVF2 5795 aa4.18□□□□□ -1.74
ACTN1-207ENST00000553290 KRTAP5-10Q6L8G5 202 aa4.17□□□□□ -1.74
ACTN1-207ENST00000553290 KRTAP15-1Q3LI76 137 aa4.16□□□□□ -1.74
ACTN1-207ENST00000553290 SPRR5A0A1B0GTR4 108 aa4.15□□□□□ -1.75
ACTN1-207ENST00000553290 KRTAP20-2Q3LI61 65 aa4.15□□□□□ -1.75
ACTN1-207ENST00000553290 KRTAP12-4P60329 112 aa4.14□□□□□ -1.75
ACTN1-207ENST00000553290 LOC100996750A0A140TA64 210 aa4.13□□□□□ -1.75
ACTN1-207ENST00000553290 ROMO1P60602 79 aa4.12□□□□□ -1.75
ACTN1-207ENST00000553290 LCE3CQ5T5A8 94 aa4.1□□□□□ -1.75
ACTN1-207ENST00000553290 KRTAP5-3Q6L8H2 238 aa4.08□□□□□ -1.76
ACTN1-207ENST00000553290 KRTAP5-7Q6L8G8 165 aa4.02□□□□□ -1.77
ACTN1-207ENST00000553290 SYNE1Q8NF91 8797 aaKnown RBP4□□□□□ -1.77
ACTN1-207ENST00000553290 MT1AP04731 61 aa3.93□□□□□ -1.78
ACTN1-207ENST00000553290 KRTAP6-1Q3LI64 71 aa3.9□□□□□ -1.79
ACTN1-207ENST00000553290 KRTAP5-2Q701N4 177 aa3.85□□□□□ -1.79
ACTN1-207ENST00000553290 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.79
ACTN1-207ENST00000553290 KRTAP9-4Q9BYQ2 154 aa3.8□□□□□ -1.8
ACTN1-207ENST00000553290 KRTAP4-11Q9BYQ6 195 aa3.8□□□□□ -1.8
ACTN1-207ENST00000553290 A0A0A0MQY5 61 aa3.76□□□□□ -1.81
ACTN1-207ENST00000553290 NDUFAF8A1L188 74 aa3.74□□□□□ -1.81
ACTN1-207ENST00000553290 KRTAP6-2Q3LI66 62 aa3.72□□□□□ -1.81
ACTN1-207ENST00000553290 KRTAP5-8O75690 187 aa3.67□□□□□ -1.82
ACTN1-207ENST00000553290 MT3P25713 68 aa3.61□□□□□ -1.83
ACTN1-207ENST00000553290 LUZP6Q538Z0 58 aa3.6□□□□□ -1.83
ACTN1-207ENST00000553290 OBSCNQ5VST9 7968 aa3.53□□□□□ -1.84
ACTN1-207ENST00000553290 KRTAP9-9Q9BYP9 154 aa3.5□□□□□ -1.85
ACTN1-207ENST00000553290 AHNAKQ09666 5890 aaKnown RBP3.49□□□□□ -1.85
ACTN1-207ENST00000553290 KRTAP5-1Q6L8H4 278 aa3.45□□□□□ -1.86
ACTN1-207ENST00000553290 MUC5BQ9HC84 5762 aaPredicted RBP3.44□□□□□ -1.86
ACTN1-207ENST00000553290 MUC5ACP98088 5654 aa3.43□□□□□ -1.86
ACTN1-207ENST00000553290 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
ACTN1-207ENST00000553290 INE1O15225 51 aa3.24□□□□□ -1.89
ACTN1-207ENST00000553290 KRTAP4-2Q9BYR5 136 aa3.11□□□□□ -1.91
ACTN1-207ENST00000553290 LCE1BQ5T7P3 118 aa3.1□□□□□ -1.91
ACTN1-207ENST00000553290 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
ACTN1-207ENST00000553290 LCE3DQ9BYE3 92 aa2.96□□□□□ -1.94
ACTN1-207ENST00000553290 KRTAP4-12Q9BQ66 201 aa2.82□□□□□ -1.96
ACTN1-207ENST00000553290 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.8□□□□□ -1.96
ACTN1-207ENST00000553290 KRTAP5-11Q6L8G4 156 aa2.79□□□□□ -1.96
ACTN1-207ENST00000553290 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
ACTN1-207ENST00000553290 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
ACTN1-207ENST00000553290 KRTAP21-2Q3LI59 83 aa2.57□□□□□ -2
ACTN1-207ENST00000553290 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
ACTN1-207ENST00000553290 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
ACTN1-207ENST00000553290 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
ACTN1-207ENST00000553290 PRM1P04553 51 aa2.06□□□□□ -2.08
ACTN1-207ENST00000553290 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
ACTN1-207ENST00000553290 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 122.6 ms