RNA–Protein interactions for RNA: ENST00000553182.5

DDX23-218, Transcript of DEAD-box helicase 23, human

TSL 3

Gene DDX23, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX23-218	ENST00000553182		A8MU10	97 aa		4.92	□□□□□ -1.62
DDX23-218	ENST00000553182	KRTAP4-3	Q9BYR4	195 aa		4.89	□□□□□ -1.63
DDX23-218	ENST00000553182	PRR15L	Q9BU68	103 aa		4.84	□□□□□ -1.63
DDX23-218	ENST00000553182	KRTAP4-6	Q9BYQ5	205 aa		4.84	□□□□□ -1.63
DDX23-218	ENST00000553182	KRTAP5-10	Q6L8G5	202 aa		4.82	□□□□□ -1.64
DDX23-218	ENST00000553182	KRTAP12-3	P60328	96 aa		4.8	□□□□□ -1.64
DDX23-218	ENST00000553182	ANAPC13	Q9BS18	74 aa		4.74	□□□□□ -1.65
DDX23-218	ENST00000553182	KRTAP4-7	Q9BYR0	210 aa		4.73	□□□□□ -1.65
DDX23-218	ENST00000553182	ATP5E	P56381	51 aa	Predicted RBP	4.72	□□□□□ -1.65
DDX23-218	ENST00000553182	LINC01558	Q9Y6Z2	57 aa		4.71	□□□□□ -1.66
DDX23-218	ENST00000553182	KRTAP5-7	Q6L8G8	165 aa		4.69	□□□□□ -1.66
DDX23-218	ENST00000553182	KRTAP5-3	Q6L8H2	238 aa		4.69	□□□□□ -1.66
DDX23-218	ENST00000553182	SPRR5	A0A1B0GTR4	108 aa		4.68	□□□□□ -1.66
DDX23-218	ENST00000553182	KRTAP20-2	Q3LI61	65 aa		4.67	□□□□□ -1.66
DDX23-218	ENST00000553182	UQCR11	O14957	56 aa		4.66	□□□□□ -1.66
DDX23-218	ENST00000553182	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.66	□□□□□ -1.66
DDX23-218	ENST00000553182	KRTAP12-4	P60329	112 aa		4.65	□□□□□ -1.67
DDX23-218	ENST00000553182	KRTAP19-4	Q3LI73	84 aa		4.64	□□□□□ -1.67
DDX23-218	ENST00000553182	KRTAP25-1	Q3LHN0	102 aa		4.62	□□□□□ -1.67
DDX23-218	ENST00000553182		H3BS24	57 aa		4.61	□□□□□ -1.67
DDX23-218	ENST00000553182	CCDC179	H3BU77	68 aa		4.61	□□□□□ -1.67
DDX23-218	ENST00000553182	SYNE1	Q8NF91	8797 aa	Known RBP	4.59	□□□□□ -1.67
DDX23-218	ENST00000553182		K7ERS5	55 aa		4.53	□□□□□ -1.68
DDX23-218	ENST00000553182	MIR22HG	Q0VDD5	57 aa		4.52	□□□□□ -1.69
DDX23-218	ENST00000553182	LOC100996750	A0A140TA64	210 aa		4.49	□□□□□ -1.69
DDX23-218	ENST00000553182	TMEM258	P61165	79 aa		4.49	□□□□□ -1.69
DDX23-218	ENST00000553182	KRTAP23-1	A1A580	65 aa		4.48	□□□□□ -1.69
DDX23-218	ENST00000553182	KRTAP15-1	Q3LI76	137 aa		4.44	□□□□□ -1.7
DDX23-218	ENST00000553182	LCE3C	Q5T5A8	94 aa		4.4	□□□□□ -1.71
DDX23-218	ENST00000553182		V9GYY9	64 aa		4.36	□□□□□ -1.71
DDX23-218	ENST00000553182	KRTAP4-11	Q9BYQ6	195 aa		4.33	□□□□□ -1.72
DDX23-218	ENST00000553182	MT1A	P04731	61 aa		4.3	□□□□□ -1.72
DDX23-218	ENST00000553182	KRTAP5-2	Q701N4	177 aa		4.3	□□□□□ -1.72
DDX23-218	ENST00000553182	PCP4	P48539	62 aa		4.29	□□□□□ -1.72
DDX23-218	ENST00000553182	PSPHP1	O15172	72 aa		4.28	□□□□□ -1.72
DDX23-218	ENST00000553182		Q1T7F1	81 aa		4.26	□□□□□ -1.73
DDX23-218	ENST00000553182	KRTAP6-1	Q3LI64	71 aa		4.25	□□□□□ -1.73
DDX23-218	ENST00000553182	CDC42SE1	Q9NRR8	79 aa		4.22	□□□□□ -1.73
DDX23-218	ENST00000553182	OBSCN	Q5VST9	7968 aa		4.19	□□□□□ -1.74
DDX23-218	ENST00000553182	KRTAP9-4	Q9BYQ2	154 aa		4.19	□□□□□ -1.74
DDX23-218	ENST00000553182	RPS28	P62857	69 aa	Known RBP	4.18	□□□□□ -1.74
DDX23-218	ENST00000553182		A6NED7	52 aa		4.16	□□□□□ -1.74
DDX23-218	ENST00000553182	KRTAP5-8	O75690	187 aa		4.16	□□□□□ -1.74
DDX23-218	ENST00000553182	AHNAK	Q09666	5890 aa	Known RBP	4.14	□□□□□ -1.75
DDX23-218	ENST00000553182	ROMO1	P60602	79 aa		4.13	□□□□□ -1.75
DDX23-218	ENST00000553182	KRTAP6-2	Q3LI66	62 aa		4.11	□□□□□ -1.75
DDX23-218	ENST00000553182	KRTAP9-6	A8MVA2	160 aa		4.09	□□□□□ -1.75
DDX23-218	ENST00000553182	MUC5AC	P98088	5654 aa		4.09	□□□□□ -1.75
DDX23-218	ENST00000553182	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.09	□□□□□ -1.75
DDX23-218	ENST00000553182	KRTAP9-9	Q9BYP9	154 aa		4.03	□□□□□ -1.76
DDX23-218	ENST00000553182		A0A0A0MQY5	61 aa		3.99	□□□□□ -1.77
DDX23-218	ENST00000553182	MT3	P25713	68 aa		3.98	□□□□□ -1.77
DDX23-218	ENST00000553182	KRTAP5-1	Q6L8H4	278 aa		3.88	□□□□□ -1.79
DDX23-218	ENST00000553182	LCE1E	Q5T753	118 aa		3.72	□□□□□ -1.81
DDX23-218	ENST00000553182	KRTAP4-12	Q9BQ66	201 aa		3.65	□□□□□ -1.83
DDX23-218	ENST00000553182	KRTAP4-2	Q9BYR5	136 aa		3.46	□□□□□ -1.86
DDX23-218	ENST00000553182	LCE1B	Q5T7P3	118 aa		3.45	□□□□□ -1.86
DDX23-218	ENST00000553182	LCE1C	Q5T751	118 aa		3.43	□□□□□ -1.86
DDX23-218	ENST00000553182	BRK1	Q8WUW1	75 aa		3.31	□□□□□ -1.88
DDX23-218	ENST00000553182	PRAC1	Q96KF2	57 aa		3.28	□□□□□ -1.88
DDX23-218	ENST00000553182	LCE3D	Q9BYE3	92 aa		3.15	□□□□□ -1.91
DDX23-218	ENST00000553182	PMAIP1	Q13794	54 aa		3.12	□□□□□ -1.91
DDX23-218	ENST00000553182	LCE1F	Q5T754	118 aa		3.12	□□□□□ -1.91
DDX23-218	ENST00000553182	KRTAP5-11	Q6L8G4	156 aa		3.11	□□□□□ -1.91
DDX23-218	ENST00000553182	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.1	□□□□□ -1.91
DDX23-218	ENST00000553182	NDUFAF8	A1L188	74 aa		2.97	□□□□□ -1.93
DDX23-218	ENST00000553182	LCE3E	Q5T5B0	92 aa		2.94	□□□□□ -1.94
DDX23-218	ENST00000553182	PRO0628	Q9UI54	55 aa		2.87	□□□□□ -1.95
DDX23-218	ENST00000553182	PHGR1	C9JFL3	82 aa		2.82	□□□□□ -1.96
DDX23-218	ENST00000553182	KRTAP21-2	Q3LI59	83 aa		2.81	□□□□□ -1.96
DDX23-218	ENST00000553182	LUZP6	Q538Z0	58 aa		2.69	□□□□□ -1.98
DDX23-218	ENST00000553182	KTN1-AS1	Q86SY8	53 aa		2.61	□□□□□ -1.99
DDX23-218	ENST00000553182	MUC19	Q7Z5P9	8384 aa		2.58	□□□□□ -2
DDX23-218	ENST00000553182	KRTAP4-4	Q9BYR3	166 aa		2.56	□□□□□ -2
DDX23-218	ENST00000553182	KRTAP21-1	Q3LI58	79 aa		2.18	□□□□□ -2.06
DDX23-218	ENST00000553182	PRM1	P04553	51 aa		2.06	□□□□□ -2.08
DDX23-218	ENST00000553182	MUC16	Q8WXI7	14507 aa		1.85	□□□□□ -2.11
DDX23-218	ENST00000553182	INE1	O15225	51 aa		1.84	□□□□□ -2.11

Retrieved 78 of 20,778 RNA–protein pairs in 61.4 ms