RNA–Protein interactions for RNA: ENST00000553065.1

DDX23-217, Transcript of DEAD-box helicase 23, humanhuman

TSL 2

Gene DDX23, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-217ENST00000553065 SMIM26A0A096LP01 95 aa3.6□□□□□ -1.83
DDX23-217ENST00000553065 A0A1B0GU69 56 aa3.6□□□□□ -1.83
DDX23-217ENST00000553065 KRTAP5-10Q6L8G5 202 aa3.58□□□□□ -1.84
DDX23-217ENST00000553065 TNP1P09430 55 aa3.57□□□□□ -1.84
DDX23-217ENST00000553065 CCDC179H3BU77 68 aa3.52□□□□□ -1.85
DDX23-217ENST00000553065 KRTAP12-3P60328 96 aa3.51□□□□□ -1.85
DDX23-217ENST00000553065 KRTAP5-5Q701N2 237 aaPredicted RBP3.51□□□□□ -1.85
DDX23-217ENST00000553065 SYNE1Q8NF91 8797 aaKnown RBP3.48□□□□□ -1.85
DDX23-217ENST00000553065 LINC01558Q9Y6Z2 57 aa3.48□□□□□ -1.85
DDX23-217ENST00000553065 KRTAP20-2Q3LI61 65 aa3.46□□□□□ -1.86
DDX23-217ENST00000553065 KRTAP5-3Q6L8H2 238 aa3.46□□□□□ -1.86
DDX23-217ENST00000553065 ANAPC13Q9BS18 74 aa3.46□□□□□ -1.86
DDX23-217ENST00000553065 LOC100996750A0A140TA64 210 aa3.45□□□□□ -1.86
DDX23-217ENST00000553065 KRTAP5-7Q6L8G8 165 aa3.42□□□□□ -1.86
DDX23-217ENST00000553065 SPRR5A0A1B0GTR4 108 aa3.39□□□□□ -1.87
DDX23-217ENST00000553065 PRR15LQ9BU68 103 aa3.39□□□□□ -1.87
DDX23-217ENST00000553065 ATP5EP56381 51 aaPredicted RBP3.35□□□□□ -1.87
DDX23-217ENST00000553065 UQCR11O14957 56 aa3.34□□□□□ -1.87
DDX23-217ENST00000553065 KRTAP25-1Q3LHN0 102 aa3.32□□□□□ -1.88
DDX23-217ENST00000553065 KRTAP12-4P60329 112 aa3.31□□□□□ -1.88
DDX23-217ENST00000553065 MIR22HGQ0VDD5 57 aa3.27□□□□□ -1.89
DDX23-217ENST00000553065 TMEM258P61165 79 aa3.26□□□□□ -1.89
DDX23-217ENST00000553065 KRTAP19-4Q3LI73 84 aa3.25□□□□□ -1.89
DDX23-217ENST00000553065 KRTAP15-1Q3LI76 137 aa3.25□□□□□ -1.89
DDX23-217ENST00000553065 LCE3CQ5T5A8 94 aa3.25□□□□□ -1.89
DDX23-217ENST00000553065 KRTAP23-1A1A580 65 aa3.22□□□□□ -1.89
DDX23-217ENST00000553065 KRTAP6-1Q3LI64 71 aa3.21□□□□□ -1.9
DDX23-217ENST00000553065 KRTAP5-2Q701N4 177 aa3.21□□□□□ -1.9
DDX23-217ENST00000553065 KRTAP9-6A8MVA2 160 aa3.18□□□□□ -1.9
DDX23-217ENST00000553065 PSPHP1O15172 72 aa3.17□□□□□ -1.9
DDX23-217ENST00000553065 MT1AP04731 61 aa3.17□□□□□ -1.9
DDX23-217ENST00000553065 KRTAP4-11Q9BYQ6 195 aa3.17□□□□□ -1.9
DDX23-217ENST00000553065 Q1T7F1 81 aa3.15□□□□□ -1.91
DDX23-217ENST00000553065 K7ERS5 55 aa3.11□□□□□ -1.91
DDX23-217ENST00000553065 KRTAP5-8O75690 187 aa3.11□□□□□ -1.91
DDX23-217ENST00000553065 KRTAP9-4Q9BYQ2 154 aa3.11□□□□□ -1.91
DDX23-217ENST00000553065 OBSCNQ5VST9 7968 aa3.08□□□□□ -1.92
DDX23-217ENST00000553065 PCP4P48539 62 aa3.06□□□□□ -1.92
DDX23-217ENST00000553065 KRTAP6-2Q3LI66 62 aa3.06□□□□□ -1.92
DDX23-217ENST00000553065 V9GYY9 64 aa3.06□□□□□ -1.92
DDX23-217ENST00000553065 MUC5BQ9HC84 5762 aaPredicted RBP3.01□□□□□ -1.93
DDX23-217ENST00000553065 A6NED7 52 aa2.99□□□□□ -1.93
DDX23-217ENST00000553065 ROMO1P60602 79 aa2.99□□□□□ -1.93
DDX23-217ENST00000553065 CDC42SE1Q9NRR8 79 aa2.99□□□□□ -1.93
DDX23-217ENST00000553065 AHNAKQ09666 5890 aaKnown RBP2.99□□□□□ -1.93
DDX23-217ENST00000553065 MUC5ACP98088 5654 aa2.97□□□□□ -1.93
DDX23-217ENST00000553065 RPS28P62857 69 aaKnown RBP2.93□□□□□ -1.94
DDX23-217ENST00000553065 KRTAP5-1Q6L8H4 278 aa2.92□□□□□ -1.94
DDX23-217ENST00000553065 MT3P25713 68 aa2.88□□□□□ -1.95
DDX23-217ENST00000553065 KRTAP9-9Q9BYP9 154 aa2.86□□□□□ -1.95
DDX23-217ENST00000553065 LCE1EQ5T753 118 aa2.69□□□□□ -1.98
DDX23-217ENST00000553065 SVIPQ8NHG7 77 aa2.64□□□□□ -1.99
DDX23-217ENST00000553065 KRTAP4-2Q9BYR5 136 aa2.62□□□□□ -1.99
DDX23-217ENST00000553065 H3BS24 57 aa2.59□□□□□ -1.99
DDX23-217ENST00000553065 LCE1BQ5T7P3 118 aa2.53□□□□□ -2
DDX23-217ENST00000553065 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
DDX23-217ENST00000553065 PRO0628Q9UI54 55 aa2.47□□□□□ -2.01
DDX23-217ENST00000553065 BRK1Q8WUW1 75 aa2.44□□□□□ -2.02
DDX23-217ENST00000553065 KRTAP4-12Q9BQ66 201 aa2.4□□□□□ -2.03
DDX23-217ENST00000553065 PRAC1Q96KF2 57 aa2.3□□□□□ -2.04
DDX23-217ENST00000553065 PMAIP1Q13794 54 aa2.29□□□□□ -2.04
DDX23-217ENST00000553065 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
DDX23-217ENST00000553065 LCE3DQ9BYE3 92 aa2.29□□□□□ -2.04
DDX23-217ENST00000553065 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
DDX23-217ENST00000553065 KTN1-AS1Q86SY8 53 aa2.27□□□□□ -2.05
DDX23-217ENST00000553065 LCE1FQ5T754 118 aa2.21□□□□□ -2.06
DDX23-217ENST00000553065 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
DDX23-217ENST00000553065 LCE3EQ5T5B0 92 aa2.13□□□□□ -2.07
DDX23-217ENST00000553065 PHGR1C9JFL3 82 aa2.03□□□□□ -2.08
DDX23-217ENST00000553065 KRTAP4-4Q9BYR3 166 aa1.97□□□□□ -2.09
DDX23-217ENST00000553065 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
DDX23-217ENST00000553065 A0A0A0MQY5 61 aa1.89□□□□□ -2.11
DDX23-217ENST00000553065 NDUFAF8A1L188 74 aa1.79□□□□□ -2.12
DDX23-217ENST00000553065 LUZP6Q538Z0 58 aa1.79□□□□□ -2.12
DDX23-217ENST00000553065 PRM1P04553 51 aa1.55□□□□□ -2.16
DDX23-217ENST00000553065 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
DDX23-217ENST00000553065 INE1O15225 51 aa1.47□□□□□ -2.17
DDX23-217ENST00000553065 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 87.1 ms