RNA–Protein interactions for RNA: ENST00000552696.1

NPAS3-212, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-212ENST00000552696 PKHD1P08F94 4074 aa0.59□□□□□ -2.31
NPAS3-212ENST00000552696 CUBNO60494 3623 aa0.59□□□□□ -2.31
NPAS3-212ENST00000552696 DNAH5Q8TE73 4624 aa0.58□□□□□ -2.32
NPAS3-212ENST00000552696 TNXBP22105 4242 aa0.58□□□□□ -2.32
NPAS3-212ENST00000552696 DYNC1H1Q14204 4646 aaKnown RBP0.57□□□□□ -2.32
NPAS3-212ENST00000552696 PLECQ15149 4684 aaKnown RBP0.56□□□□□ -2.32
NPAS3-212ENST00000552696 LPAP08519 4548 aa0.56□□□□□ -2.32
NPAS3-212ENST00000552696 SMR3BP02814 79 aaPredicted RBP0.54□□□□□ -2.32
NPAS3-212ENST00000552696 LRP1Q07954 4544 aaKnown RBP0.54□□□□□ -2.32
NPAS3-212ENST00000552696 PRM1P04553 51 aa0.53□□□□□ -2.32
NPAS3-212ENST00000552696 MUC17Q685J3 4493 aa0.52□□□□□ -2.33
NPAS3-212ENST00000552696 STARD9Q9P2P6 4700 aa0.52□□□□□ -2.33
NPAS3-212ENST00000552696 FAT1Q14517 4588 aa0.51□□□□□ -2.33
NPAS3-212ENST00000552696 MT1AP04731 61 aa0.5□□□□□ -2.33
NPAS3-212ENST00000552696 KRTAP19-3Q7Z4W3 81 aa0.5□□□□□ -2.33
NPAS3-212ENST00000552696 KRTAP19-5Q3LI72 72 aa0.49□□□□□ -2.33
NPAS3-212ENST00000552696 SPRR2GQ9BYE4 73 aa0.48□□□□□ -2.33
NPAS3-212ENST00000552696 SPRR2BP35325 72 aa0.47□□□□□ -2.33
NPAS3-212ENST00000552696 SPRR2AP35326 72 aa0.47□□□□□ -2.33
NPAS3-212ENST00000552696 LRP1BQ9NZR2 4599 aa0.46□□□□□ -2.34
NPAS3-212ENST00000552696 SPRR2DP22532 72 aa0.46□□□□□ -2.34
NPAS3-212ENST00000552696 MT1EP04732 61 aa0.45□□□□□ -2.34
NPAS3-212ENST00000552696 SPRR2FQ96RM1 72 aa0.45□□□□□ -2.34
NPAS3-212ENST00000552696 HERC1Q15751 4861 aa0.45□□□□□ -2.34
NPAS3-212ENST00000552696 LRP2P98164 4655 aa0.44□□□□□ -2.34
NPAS3-212ENST00000552696 GPR98Q8WXG9 6306 aa0.44□□□□□ -2.34
NPAS3-212ENST00000552696 KRTAP6-2Q3LI66 62 aa0.44□□□□□ -2.34
NPAS3-212ENST00000552696 MT1LQ93083 61 aa0.44□□□□□ -2.34
NPAS3-212ENST00000552696 SPRR2EP22531 72 aa0.42□□□□□ -2.34
NPAS3-212ENST00000552696 KRTAP19-8Q3LI54 63 aa0.42□□□□□ -2.34
NPAS3-212ENST00000552696 MT1HP80294 61 aa0.41□□□□□ -2.34
NPAS3-212ENST00000552696 MT1XP80297 61 aa0.41□□□□□ -2.34
NPAS3-212ENST00000552696 SYNE1Q8NF91 8797 aaKnown RBP0.41□□□□□ -2.34
NPAS3-212ENST00000552696 DNHD1Q96M86 4753 aa0.4□□□□□ -2.35
NPAS3-212ENST00000552696 HYDINQ4G0P3 5121 aa0.38□□□□□ -2.35
NPAS3-212ENST00000552696 MUC5BQ9HC84 5762 aaPredicted RBP0.37□□□□□ -2.35
NPAS3-212ENST00000552696 KRTAP21-1Q3LI58 79 aa0.37□□□□□ -2.35
NPAS3-212ENST00000552696 MT1GP13640 62 aa0.36□□□□□ -2.35
NPAS3-212ENST00000552696 KRTAP19-2Q3LHN2 52 aa0.36□□□□□ -2.35
NPAS3-212ENST00000552696 MUC2Q02817 5179 aa0.36□□□□□ -2.35
NPAS3-212ENST00000552696 BIRC6Q9NR09 4857 aa0.36□□□□□ -2.35
NPAS3-212ENST00000552696 HMCN2Q8NDA2 5059 aa0.35□□□□□ -2.35
NPAS3-212ENST00000552696 HERC2O95714 4834 aa0.35□□□□□ -2.35
NPAS3-212ENST00000552696 MT1BP07438 61 aa0.35□□□□□ -2.35
NPAS3-212ENST00000552696 KRTAP19-7Q3SYF9 63 aa0.35□□□□□ -2.35
NPAS3-212ENST00000552696 PCLOQ9Y6V0 5065 aa0.35□□□□□ -2.35
NPAS3-212ENST00000552696 MDN1Q9NU22 5596 aa0.35□□□□□ -2.35
NPAS3-212ENST00000552696 KMT2CQ8NEZ4 4911 aaKnown RBP0.35□□□□□ -2.35
NPAS3-212ENST00000552696 RNF213Q63HN8 5207 aa0.34□□□□□ -2.35
NPAS3-212ENST00000552696 RYR3Q15413 4870 aa0.34□□□□□ -2.35
NPAS3-212ENST00000552696 MT2AP02795 61 aa0.34□□□□□ -2.36
NPAS3-212ENST00000552696 MT1HL1P0DM35 61 aa0.34□□□□□ -2.36
NPAS3-212ENST00000552696 MT1MQ8N339 61 aa0.34□□□□□ -2.36
NPAS3-212ENST00000552696 KMT2DO14686 5537 aa0.34□□□□□ -2.36
NPAS3-212ENST00000552696 USH2AO75445 5202 aa0.34□□□□□ -2.36
NPAS3-212ENST00000552696 AHNAKQ09666 5890 aaKnown RBP0.34□□□□□ -2.36
NPAS3-212ENST00000552696 FAT4Q6V0I7 4981 aa0.33□□□□□ -2.36
NPAS3-212ENST00000552696 MACF1Q9UPN3 7388 aaKnown RBP0.33□□□□□ -2.36
NPAS3-212ENST00000552696 RYR1P21817 5038 aa0.33□□□□□ -2.36
NPAS3-212ENST00000552696 UBR4Q5T4S7 5183 aa0.32□□□□□ -2.36
NPAS3-212ENST00000552696 SSPOA2VEC9 5147 aa0.32□□□□□ -2.36
NPAS3-212ENST00000552696 MT1FP04733 61 aa0.31□□□□□ -2.36
NPAS3-212ENST00000552696 KRTAP6-1Q3LI64 71 aa0.31□□□□□ -2.36
NPAS3-212ENST00000552696 MUC5ACP98088 5654 aa0.3□□□□□ -2.36
NPAS3-212ENST00000552696 PHGR1C9JFL3 82 aa0.3□□□□□ -2.36
NPAS3-212ENST00000552696 MUC12Q9UKN1 5478 aa0.27□□□□□ -2.37
NPAS3-212ENST00000552696 EPPK1P58107 5090 aaKnown RBP0.27□□□□□ -2.37
NPAS3-212ENST00000552696 SYNE2Q8WXH0 6885 aaKnown RBP0.27□□□□□ -2.37
NPAS3-212ENST00000552696 RYR2Q92736 4967 aa0.26□□□□□ -2.37
NPAS3-212ENST00000552696 ABCA13Q86UQ4 5058 aa0.26□□□□□ -2.37
NPAS3-212ENST00000552696 KIAA1109Q2LD37 5005 aa0.24□□□□□ -2.37
NPAS3-212ENST00000552696 FSIP2Q5CZC0 6907 aa0.24□□□□□ -2.37
NPAS3-212ENST00000552696 KRTAP19-6Q3LI70 58 aa0.17□□□□□ -2.38
NPAS3-212ENST00000552696 MT4P47944 62 aa0.14□□□□□ -2.39
NPAS3-212ENST00000552696 DSTQ03001 7570 aaKnown RBP0.13□□□□□ -2.39
NPAS3-212ENST00000552696 KRTAP20-2Q3LI61 65 aa0.12□□□□□ -2.39
NPAS3-212ENST00000552696 NEBP20929 6669 aa0.09□□□□□ -2.4
NPAS3-212ENST00000552696 KRTAP20-1Q3LI63 56 aa0.08□□□□□ -2.4
Retrieved 78 of 20,778 RNA–protein pairs in 70.7 ms