RNA–Protein interactions for RNA: ENST00000552495.1

RITA1-203, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

TSL 2 BASIC

Gene RITA1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-203ENST00000552495 SPRR2FQ96RM1 72 aa7.94□□□□□ -1.14
RITA1-203ENST00000552495 MT1GP13640 62 aa7.94□□□□□ -1.14
RITA1-203ENST00000552495 KRTAP9-6A8MVA2 160 aa7.92□□□□□ -1.14
RITA1-203ENST00000552495 MUC12Q9UKN1 5478 aa7.88□□□□□ -1.15
RITA1-203ENST00000552495 MT1MQ8N339 61 aa7.84□□□□□ -1.15
RITA1-203ENST00000552495 A0A0A0MQY5 61 aa7.83□□□□□ -1.16
RITA1-203ENST00000552495 LCE5AQ5TCM9 118 aa7.77□□□□□ -1.17
RITA1-203ENST00000552495 KRTAP4-3Q9BYR4 195 aa7.71□□□□□ -1.18
RITA1-203ENST00000552495 KRTAP5-9P26371 169 aa7.7□□□□□ -1.18
RITA1-203ENST00000552495 SYNE2Q8WXH0 6885 aaKnown RBP7.7□□□□□ -1.18
RITA1-203ENST00000552495 LOC100996750A0A140TA64 210 aa7.53□□□□□ -1.2
RITA1-203ENST00000552495 LCE1AQ5T7P2 110 aa7.53□□□□□ -1.2
RITA1-203ENST00000552495 KRTAP2-3P0C7H8 128 aa7.49□□□□□ -1.21
RITA1-203ENST00000552495 KRTAP2-4Q9BYR9 128 aa7.49□□□□□ -1.21
RITA1-203ENST00000552495 KRTAP2-1Q9BYU5 128 aa7.49□□□□□ -1.21
RITA1-203ENST00000552495 KRTAP9-6A0A140TA67 174 aa7.47□□□□□ -1.21
RITA1-203ENST00000552495 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.44□□□□□ -1.22
RITA1-203ENST00000552495 SPRR2EP22531 72 aa7.43□□□□□ -1.22
RITA1-203ENST00000552495 SPRR2BP35325 72 aa7.43□□□□□ -1.22
RITA1-203ENST00000552495 SPRR2AP35326 72 aa7.43□□□□□ -1.22
RITA1-203ENST00000552495 MDN1Q9NU22 5596 aa7.42□□□□□ -1.22
RITA1-203ENST00000552495 KRTAP6-3Q3LI67 103 aa7.4□□□□□ -1.23
RITA1-203ENST00000552495 DSTQ03001 7570 aaKnown RBP7.35□□□□□ -1.23
RITA1-203ENST00000552495 INE1O15225 51 aa7.25□□□□□ -1.25
RITA1-203ENST00000552495 SPRR2DP22532 72 aa7.15□□□□□ -1.26
RITA1-203ENST00000552495 KRTAP5-5Q701N2 237 aaPredicted RBP7.02□□□□□ -1.28
RITA1-203ENST00000552495 MT1AP04731 61 aa7□□□□□ -1.29
RITA1-203ENST00000552495 KRTAP6-1Q3LI64 71 aa6.94□□□□□ -1.3
RITA1-203ENST00000552495 KRTAP9-7A8MTY7 169 aa6.9□□□□□ -1.3
RITA1-203ENST00000552495 LCE3BQ5TA77 95 aa6.84□□□□□ -1.31
RITA1-203ENST00000552495 NEBP20929 6669 aa6.83□□□□□ -1.32
RITA1-203ENST00000552495 SYNE1Q8NF91 8797 aaKnown RBP6.69□□□□□ -1.34
RITA1-203ENST00000552495 KRTAP9-4Q9BYQ2 154 aa6.62□□□□□ -1.35
RITA1-203ENST00000552495 KRTAP5-4Q6L8H1 288 aa6.52□□□□□ -1.37
RITA1-203ENST00000552495 KRTAP4-9Q9BYQ8 210 aa6.51□□□□□ -1.37
RITA1-203ENST00000552495 KRTAP12-4P60329 112 aa6.47□□□□□ -1.37
RITA1-203ENST00000552495 LCE3DQ9BYE3 92 aa6.36□□□□□ -1.39
RITA1-203ENST00000552495 MT3P25713 68 aa6.34□□□□□ -1.39
RITA1-203ENST00000552495 KRTAP6-2Q3LI66 62 aa6.34□□□□□ -1.39
RITA1-203ENST00000552495 LCE4AQ5TA78 99 aa6.33□□□□□ -1.4
RITA1-203ENST00000552495 KRTAP2-2Q9BYT5 123 aa6.29□□□□□ -1.4
RITA1-203ENST00000552495 LCE3EQ5T5B0 92 aa6.23□□□□□ -1.41
RITA1-203ENST00000552495 MT4P47944 62 aa6.21□□□□□ -1.42
RITA1-203ENST00000552495 KRTAP4-6Q9BYQ5 205 aa6.19□□□□□ -1.42
RITA1-203ENST00000552495 KRTAP20-1Q3LI63 56 aa6.16□□□□□ -1.42
RITA1-203ENST00000552495 KRTAP20-2Q3LI61 65 aa6.09□□□□□ -1.43
RITA1-203ENST00000552495 LCE1DQ5T752 114 aa6.01□□□□□ -1.45
RITA1-203ENST00000552495 KRTAP5-2Q701N4 177 aa5.98□□□□□ -1.45
RITA1-203ENST00000552495 HMCN1Q96RW7 5635 aa5.96□□□□□ -1.46
RITA1-203ENST00000552495 KRTAP5-3Q6L8H2 238 aa5.85□□□□□ -1.47
RITA1-203ENST00000552495 OBSCNQ5VST9 7968 aa5.82□□□□□ -1.48
RITA1-203ENST00000552495 PRM1P04553 51 aa5.6□□□□□ -1.51
RITA1-203ENST00000552495 LCE1EQ5T753 118 aa5.41□□□□□ -1.54
RITA1-203ENST00000552495 KRTAP4-11Q9BYQ6 195 aa5.2□□□□□ -1.58
RITA1-203ENST00000552495 KRTAP5-1Q6L8H4 278 aa5.12□□□□□ -1.59
RITA1-203ENST00000552495 MUC5ACP98088 5654 aa5.11□□□□□ -1.59
RITA1-203ENST00000552495 LCE1BQ5T7P3 118 aa5.11□□□□□ -1.59
RITA1-203ENST00000552495 KRTAP5-10Q6L8G5 202 aa5.08□□□□□ -1.6
RITA1-203ENST00000552495 AHNAK2Q8IVF2 5795 aa5.06□□□□□ -1.6
RITA1-203ENST00000552495 LCE1CQ5T751 118 aa5.05□□□□□ -1.6
RITA1-203ENST00000552495 KRTAP4-2Q9BYR5 136 aa5.01□□□□□ -1.61
RITA1-203ENST00000552495 KRTAP5-8O75690 187 aa4.98□□□□□ -1.61
RITA1-203ENST00000552495 KRTAP5-7Q6L8G8 165 aa4.9□□□□□ -1.63
RITA1-203ENST00000552495 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.75□□□□□ -1.65
RITA1-203ENST00000552495 GPR98Q8WXG9 6306 aa4.64□□□□□ -1.67
RITA1-203ENST00000552495 KRTAP21-2Q3LI59 83 aa4.53□□□□□ -1.68
RITA1-203ENST00000552495 KRTAP9-9Q9BYP9 154 aa4.43□□□□□ -1.7
RITA1-203ENST00000552495 KRTAP5-11Q6L8G4 156 aa4.41□□□□□ -1.7
RITA1-203ENST00000552495 MUC5BQ9HC84 5762 aaPredicted RBP4.23□□□□□ -1.73
RITA1-203ENST00000552495 KRTAP4-12Q9BQ66 201 aa4.09□□□□□ -1.76
RITA1-203ENST00000552495 KRTAP4-4Q9BYR3 166 aa4.02□□□□□ -1.77
RITA1-203ENST00000552495 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
RITA1-203ENST00000552495 PHGR1C9JFL3 82 aa3.79□□□□□ -1.8
RITA1-203ENST00000552495 AHNAKQ09666 5890 aaKnown RBP3.71□□□□□ -1.82
RITA1-203ENST00000552495 KRTAP21-1Q3LI58 79 aa3.48□□□□□ -1.85
RITA1-203ENST00000552495 MUC19Q7Z5P9 8384 aa3.46□□□□□ -1.86
RITA1-203ENST00000552495 MUC16Q8WXI7 14507 aa2.5□□□□□ -2.01
Retrieved 77 of 20,778 RNA–protein pairs in 10.7 ms