RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	SEC61G	P60059	68 aa		2.75	□□□□□ -1.97
CNOT2-238	ENST00000552422	KRTAP6-3	Q3LI67	103 aa		2.75	□□□□□ -1.97
CNOT2-238	ENST00000552422	LCE1C	Q5T751	118 aa		2.74	□□□□□ -1.97
CNOT2-238	ENST00000552422	LCE1B	Q5T7P3	118 aa		2.74	□□□□□ -1.97
CNOT2-238	ENST00000552422	KMT2D	O14686	5537 aa		2.73	□□□□□ -1.97
CNOT2-238	ENST00000552422	LINC01558	Q9Y6Z2	57 aa		2.73	□□□□□ -1.97
CNOT2-238	ENST00000552422		V9GYY9	64 aa		2.73	□□□□□ -1.97
CNOT2-238	ENST00000552422	MUC12	Q9UKN1	5478 aa		2.7	□□□□□ -1.98
CNOT2-238	ENST00000552422		A0A1B0GU33	70 aa		2.7	□□□□□ -1.98
CNOT2-238	ENST00000552422		A0A1B0GU69	56 aa		2.7	□□□□□ -1.98
CNOT2-238	ENST00000552422	SPATA8	Q6RVD6	105 aa		2.69	□□□□□ -1.98
CNOT2-238	ENST00000552422	NEB	P20929	6669 aa		2.68	□□□□□ -1.98
CNOT2-238	ENST00000552422		A0A0D9SG42	100 aa		2.67	□□□□□ -1.98
CNOT2-238	ENST00000552422	LCE3D	Q9BYE3	92 aa		2.66	□□□□□ -1.98
CNOT2-238	ENST00000552422	PSPHP1	O15172	72 aa		2.65	□□□□□ -1.99
CNOT2-238	ENST00000552422	CAMK2N1	Q7Z7J9	78 aa		2.65	□□□□□ -1.99
CNOT2-238	ENST00000552422	PRR15L	Q9BU68	103 aa		2.65	□□□□□ -1.99
CNOT2-238	ENST00000552422	KRTAP12-1	P59990	96 aa		2.64	□□□□□ -1.99
CNOT2-238	ENST00000552422	PP632	Q6XCG6	107 aa		2.63	□□□□□ -1.99
CNOT2-238	ENST00000552422	KRTAP8-1	Q8IUC2	63 aa		2.63	□□□□□ -1.99
CNOT2-238	ENST00000552422	MDN1	Q9NU22	5596 aa		2.63	□□□□□ -1.99
CNOT2-238	ENST00000552422	KRTAP20-1	Q3LI63	56 aa		2.62	□□□□□ -1.99
CNOT2-238	ENST00000552422	GPR98	Q8WXG9	6306 aa		2.61	□□□□□ -1.99
CNOT2-238	ENST00000552422	SPINT4	Q6UDR6	99 aa		2.61	□□□□□ -1.99
CNOT2-238	ENST00000552422	SPRR2F	Q96RM1	72 aa		2.61	□□□□□ -1.99
CNOT2-238	ENST00000552422	UQCR11	O14957	56 aa		2.58	□□□□□ -2
CNOT2-238	ENST00000552422		A6NED7	52 aa		2.56	□□□□□ -2
CNOT2-238	ENST00000552422	CDC42SE1	Q9NRR8	79 aa		2.56	□□□□□ -2
CNOT2-238	ENST00000552422	SPRR2E	P22531	72 aa		2.54	□□□□□ -2
CNOT2-238	ENST00000552422	SPRR2B	P35325	72 aa		2.54	□□□□□ -2
CNOT2-238	ENST00000552422	SPRR2A	P35326	72 aa		2.54	□□□□□ -2
CNOT2-238	ENST00000552422	MIR22HG	Q0VDD5	57 aa		2.54	□□□□□ -2
CNOT2-238	ENST00000552422	BRK1	Q8WUW1	75 aa		2.53	□□□□□ -2
CNOT2-238	ENST00000552422	PRO0628	Q9UI54	55 aa		2.52	□□□□□ -2.01
CNOT2-238	ENST00000552422	C10orf95	Q9H7T3	257 aa		2.5	□□□□□ -2.01
CNOT2-238	ENST00000552422	KRTAP19-7	Q3SYF9	63 aa		2.49	□□□□□ -2.01
CNOT2-238	ENST00000552422	TNP1	P09430	55 aa		2.48	□□□□□ -2.01
CNOT2-238	ENST00000552422	MT1E	P04732	61 aa		2.46	□□□□□ -2.02
CNOT2-238	ENST00000552422	SPRR2D	P22532	72 aa		2.46	□□□□□ -2.02
CNOT2-238	ENST00000552422	KRTAP2-3	P0C7H8	128 aa		2.45	□□□□□ -2.02
CNOT2-238	ENST00000552422	KRTAP2-4	Q9BYR9	128 aa		2.45	□□□□□ -2.02
CNOT2-238	ENST00000552422		K7ERS5	55 aa		2.44	□□□□□ -2.02
CNOT2-238	ENST00000552422	KRTAP19-5	Q3LI72	72 aa		2.44	□□□□□ -2.02
CNOT2-238	ENST00000552422	PMAIP1	Q13794	54 aa		2.42	□□□□□ -2.02
CNOT2-238	ENST00000552422	KRTAP19-3	Q7Z4W3	81 aa		2.41	□□□□□ -2.02
CNOT2-238	ENST00000552422	KRTAP25-1	Q3LHN0	102 aa		2.39	□□□□□ -2.03
CNOT2-238	ENST00000552422	MT1G	P13640	62 aa		2.37	□□□□□ -2.03
CNOT2-238	ENST00000552422	MT1L	Q93083	61 aa		2.37	□□□□□ -2.03
CNOT2-238	ENST00000552422	KRTAP2-1	Q9BYU5	128 aa		2.37	□□□□□ -2.03
CNOT2-238	ENST00000552422	DST	Q03001	7570 aa	Known RBP	2.35	□□□□□ -2.03
CNOT2-238	ENST00000552422	KRTAP12-3	P60328	96 aa		2.35	□□□□□ -2.03
CNOT2-238	ENST00000552422	ROMO1	P60602	79 aa		2.33	□□□□□ -2.04
CNOT2-238	ENST00000552422	MT1M	Q8N339	61 aa		2.33	□□□□□ -2.04
CNOT2-238	ENST00000552422	KRTAP5-8	O75690	187 aa		2.32	□□□□□ -2.04
CNOT2-238	ENST00000552422	KTN1-AS1	Q86SY8	53 aa		2.32	□□□□□ -2.04
CNOT2-238	ENST00000552422	SPRR5	A0A1B0GTR4	108 aa		2.28	□□□□□ -2.04
CNOT2-238	ENST00000552422	KRTAP5-7	Q6L8G8	165 aa		2.26	□□□□□ -2.05
CNOT2-238	ENST00000552422	AHNAK2	Q8IVF2	5795 aa		2.2	□□□□□ -2.06
CNOT2-238	ENST00000552422	MUC19	Q7Z5P9	8384 aa		2.19	□□□□□ -2.06
CNOT2-238	ENST00000552422	HMCN1	Q96RW7	5635 aa		2.17	□□□□□ -2.06
CNOT2-238	ENST00000552422	MT4	P47944	62 aa		2.13	□□□□□ -2.07
CNOT2-238	ENST00000552422	KRTAP5-10	Q6L8G5	202 aa		2.13	□□□□□ -2.07
CNOT2-238	ENST00000552422	KRTAP12-4	P60329	112 aa		2.04	□□□□□ -2.08
CNOT2-238	ENST00000552422	KRTAP20-2	Q3LI61	65 aa		2.04	□□□□□ -2.08
CNOT2-238	ENST00000552422	SYNE1	Q8NF91	8797 aa	Known RBP	2.03	□□□□□ -2.08
CNOT2-238	ENST00000552422	MT1A	P04731	61 aa		2.01	□□□□□ -2.09
CNOT2-238	ENST00000552422	AHNAK	Q09666	5890 aa	Known RBP	2	□□□□□ -2.09
CNOT2-238	ENST00000552422	KRTAP6-1	Q3LI64	71 aa		1.99	□□□□□ -2.09
CNOT2-238	ENST00000552422	KRTAP21-2	Q3LI59	83 aa		1.96	□□□□□ -2.1
CNOT2-238	ENST00000552422	LUZP6	Q538Z0	58 aa		1.91	□□□□□ -2.1
CNOT2-238	ENST00000552422	MUC5B	Q9HC84	5762 aa	Predicted RBP	1.91	□□□□□ -2.1
CNOT2-238	ENST00000552422	KRTAP6-2	Q3LI66	62 aa		1.88	□□□□□ -2.11
CNOT2-238	ENST00000552422	MUC5AC	P98088	5654 aa		1.84	□□□□□ -2.12
CNOT2-238	ENST00000552422	INE1	O15225	51 aa		1.51	□□□□□ -2.17
CNOT2-238	ENST00000552422	PHGR1	C9JFL3	82 aa		1.24	□□□□□ -2.21
CNOT2-238	ENST00000552422	PRM1	P04553	51 aa		1.2	□□□□□ -2.22
CNOT2-238	ENST00000552422	MUC16	Q8WXI7	14507 aa		0.96	□□□□□ -2.26
CNOT2-238	ENST00000552422	KRTAP21-1	Q3LI58	79 aa		0.95	□□□□□ -2.26

Retrieved 78 of 20,778 RNA–protein pairs in 66.3 ms