RNA–Protein interactions for RNA: ENST00000552295.5

BEST3-211, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-211ENST00000552295 KRTAP19-8Q3LI54 63 aa3.53□□□□□ -1.84
BEST3-211ENST00000552295 BRK1Q8WUW1 75 aa3.51□□□□□ -1.85
BEST3-211ENST00000552295 MT1BP07438 61 aa3.5□□□□□ -1.85
BEST3-211ENST00000552295 CDC42SE1Q9NRR8 79 aa3.48□□□□□ -1.85
BEST3-211ENST00000552295 A6NN06 94 aa3.47□□□□□ -1.85
BEST3-211ENST00000552295 K7ERS5 55 aa3.47□□□□□ -1.85
BEST3-211ENST00000552295 SPINT4Q6UDR6 99 aa3.46□□□□□ -1.86
BEST3-211ENST00000552295 USH2AO75445 5202 aa3.45□□□□□ -1.86
BEST3-211ENST00000552295 KRTAP12-1P59990 96 aa3.44□□□□□ -1.86
BEST3-211ENST00000552295 PLAC4Q8WY50 150 aa3.42□□□□□ -1.86
BEST3-211ENST00000552295 CAMK2N1Q7Z7J9 78 aa3.39□□□□□ -1.87
BEST3-211ENST00000552295 KRTAP19-6Q3LI70 58 aa3.37□□□□□ -1.87
BEST3-211ENST00000552295 FSIP2Q5CZC0 6907 aa3.36□□□□□ -1.87
BEST3-211ENST00000552295 MT1XP80297 61 aa3.35□□□□□ -1.87
BEST3-211ENST00000552295 CRCT1Q9UGL9 99 aa3.34□□□□□ -1.87
BEST3-211ENST00000552295 PRO0628Q9UI54 55 aa3.34□□□□□ -1.87
BEST3-211ENST00000552295 SSPOA2VEC9 5147 aa3.34□□□□□ -1.87
BEST3-211ENST00000552295 KRTAP5-8O75690 187 aa3.3□□□□□ -1.88
BEST3-211ENST00000552295 PMAIP1Q13794 54 aa3.3□□□□□ -1.88
BEST3-211ENST00000552295 PRO2289Q9P1D8 64 aa3.3□□□□□ -1.88
BEST3-211ENST00000552295 C10orf95Q9H7T3 257 aa3.26□□□□□ -1.89
BEST3-211ENST00000552295 FCGBPQ9Y6R7 5405 aaPredicted RBP3.26□□□□□ -1.89
BEST3-211ENST00000552295 ROMO1P60602 79 aa3.25□□□□□ -1.89
BEST3-211ENST00000552295 TNP1P09430 55 aa3.18□□□□□ -1.9
BEST3-211ENST00000552295 PP632Q6XCG6 107 aa3.16□□□□□ -1.9
BEST3-211ENST00000552295 KRTAP25-1Q3LHN0 102 aa3.15□□□□□ -1.91
BEST3-211ENST00000552295 KTN1-AS1Q86SY8 53 aa3.12□□□□□ -1.91
BEST3-211ENST00000552295 LCE3DQ9BYE3 92 aa3.1□□□□□ -1.91
BEST3-211ENST00000552295 MACF1Q9UPN3 7388 aaKnown RBP3.08□□□□□ -1.92
BEST3-211ENST00000552295 KMT2DO14686 5537 aa3.06□□□□□ -1.92
BEST3-211ENST00000552295 KRTAP8-1Q8IUC2 63 aa3.05□□□□□ -1.92
BEST3-211ENST00000552295 MUC19Q7Z5P9 8384 aa3.05□□□□□ -1.92
BEST3-211ENST00000552295 SYNE2Q8WXH0 6885 aaKnown RBP3□□□□□ -1.93
BEST3-211ENST00000552295 KRTAP19-7Q3SYF9 63 aa3□□□□□ -1.93
BEST3-211ENST00000552295 KRTAP6-3Q3LI67 103 aa2.99□□□□□ -1.93
BEST3-211ENST00000552295 KRTAP19-5Q3LI72 72 aa2.99□□□□□ -1.93
BEST3-211ENST00000552295 SPRR2FQ96RM1 72 aa2.96□□□□□ -1.94
BEST3-211ENST00000552295 KRTAP12-3P60328 96 aa2.95□□□□□ -1.94
BEST3-211ENST00000552295 MT1EP04732 61 aa2.94□□□□□ -1.94
BEST3-211ENST00000552295 KRTAP5-7Q6L8G8 165 aa2.9□□□□□ -1.95
BEST3-211ENST00000552295 MUC12Q9UKN1 5478 aa2.87□□□□□ -1.95
BEST3-211ENST00000552295 NEBP20929 6669 aa2.86□□□□□ -1.95
BEST3-211ENST00000552295 MT1LQ93083 61 aa2.86□□□□□ -1.95
BEST3-211ENST00000552295 SPRR2EP22531 72 aa2.85□□□□□ -1.95
BEST3-211ENST00000552295 SPRR2BP35325 72 aa2.85□□□□□ -1.95
BEST3-211ENST00000552295 SPRR2AP35326 72 aa2.85□□□□□ -1.95
BEST3-211ENST00000552295 KRTAP19-3Q7Z4W3 81 aa2.85□□□□□ -1.95
BEST3-211ENST00000552295 MDN1Q9NU22 5596 aa2.83□□□□□ -1.96
BEST3-211ENST00000552295 MT1GP13640 62 aa2.81□□□□□ -1.96
BEST3-211ENST00000552295 LUZP6Q538Z0 58 aa2.81□□□□□ -1.96
BEST3-211ENST00000552295 MT1MQ8N339 61 aa2.78□□□□□ -1.96
BEST3-211ENST00000552295 SPRR2DP22532 72 aa2.75□□□□□ -1.97
BEST3-211ENST00000552295 KRTAP20-1Q3LI63 56 aa2.66□□□□□ -1.98
BEST3-211ENST00000552295 SPRR5A0A1B0GTR4 108 aa2.63□□□□□ -1.99
BEST3-211ENST00000552295 KRTAP2-3P0C7H8 128 aa2.63□□□□□ -1.99
BEST3-211ENST00000552295 KRTAP2-4Q9BYR9 128 aa2.63□□□□□ -1.99
BEST3-211ENST00000552295 DSTQ03001 7570 aaKnown RBP2.63□□□□□ -1.99
BEST3-211ENST00000552295 KRTAP2-1Q9BYU5 128 aa2.57□□□□□ -2
BEST3-211ENST00000552295 KRTAP21-2Q3LI59 83 aa2.56□□□□□ -2
BEST3-211ENST00000552295 GPR98Q8WXG9 6306 aa2.56□□□□□ -2
BEST3-211ENST00000552295 MT1AP04731 61 aa2.44□□□□□ -2.02
BEST3-211ENST00000552295 KRTAP6-1Q3LI64 71 aa2.42□□□□□ -2.02
BEST3-211ENST00000552295 SYNE1Q8NF91 8797 aaKnown RBP2.38□□□□□ -2.03
BEST3-211ENST00000552295 MT4P47944 62 aa2.38□□□□□ -2.03
BEST3-211ENST00000552295 KRTAP12-4P60329 112 aa2.35□□□□□ -2.03
BEST3-211ENST00000552295 KRTAP20-2Q3LI61 65 aa2.31□□□□□ -2.04
BEST3-211ENST00000552295 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.04
BEST3-211ENST00000552295 KRTAP6-2Q3LI66 62 aa2.24□□□□□ -2.05
BEST3-211ENST00000552295 AHNAK2Q8IVF2 5795 aa2.2□□□□□ -2.06
BEST3-211ENST00000552295 KRTAP5-10Q6L8G5 202 aa2.05□□□□□ -2.08
BEST3-211ENST00000552295 INE1O15225 51 aa1.99□□□□□ -2.09
BEST3-211ENST00000552295 AHNAKQ09666 5890 aaKnown RBP1.91□□□□□ -2.1
BEST3-211ENST00000552295 MUC5ACP98088 5654 aa1.83□□□□□ -2.12
BEST3-211ENST00000552295 MUC5BQ9HC84 5762 aaPredicted RBP1.83□□□□□ -2.12
BEST3-211ENST00000552295 PRM1P04553 51 aa1.69□□□□□ -2.14
BEST3-211ENST00000552295 PHGR1C9JFL3 82 aa1.39□□□□□ -2.19
BEST3-211ENST00000552295 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
BEST3-211ENST00000552295 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 39.1 ms