RNA–Protein interactions for RNA: ENST00000552180.5

GPN3-210, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 640 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-210ENST00000552180 MT1LQ93083 61 aa6.92□□□□□ -1.3
GPN3-210ENST00000552180 PP632Q6XCG6 107 aa6.86□□□□□ -1.31
GPN3-210ENST00000552180 MT1MQ8N339 61 aa6.86□□□□□ -1.31
GPN3-210ENST00000552180 K7ERS5 55 aa6.78□□□□□ -1.32
GPN3-210ENST00000552180 PCP4P48539 62 aa6.78□□□□□ -1.32
GPN3-210ENST00000552180 KRTAP25-1Q3LHN0 102 aa6.77□□□□□ -1.33
GPN3-210ENST00000552180 KRTAP12-3P60328 96 aa6.76□□□□□ -1.33
GPN3-210ENST00000552180 RPS28P62857 69 aaKnown RBP6.74□□□□□ -1.33
GPN3-210ENST00000552180 KRTAP4-3Q9BYR4 195 aa6.71□□□□□ -1.34
GPN3-210ENST00000552180 A6NED7 52 aa6.68□□□□□ -1.34
GPN3-210ENST00000552180 SVIPQ8NHG7 77 aa6.65□□□□□ -1.34
GPN3-210ENST00000552180 KRTAP4-9Q9BYQ8 210 aa6.63□□□□□ -1.35
GPN3-210ENST00000552180 KRTAP4-7Q9BYR0 210 aa6.61□□□□□ -1.35
GPN3-210ENST00000552180 KRTAP23-1A1A580 65 aa6.55□□□□□ -1.36
GPN3-210ENST00000552180 LCE4AQ5TA78 99 aa6.53□□□□□ -1.36
GPN3-210ENST00000552180 HMCN1Q96RW7 5635 aa6.51□□□□□ -1.37
GPN3-210ENST00000552180 LCE1DQ5T752 114 aa6.5□□□□□ -1.37
GPN3-210ENST00000552180 KRTAP5-4Q6L8H1 288 aa6.48□□□□□ -1.37
GPN3-210ENST00000552180 CDC42SE1Q9NRR8 79 aa6.46□□□□□ -1.38
GPN3-210ENST00000552180 GPR98Q8WXG9 6306 aa6.45□□□□□ -1.38
GPN3-210ENST00000552180 MT4P47944 62 aa6.42□□□□□ -1.38
GPN3-210ENST00000552180 ROMO1P60602 79 aa6.4□□□□□ -1.38
GPN3-210ENST00000552180 KRTAP19-4Q3LI73 84 aa6.4□□□□□ -1.38
GPN3-210ENST00000552180 KRTAP15-1Q3LI76 137 aa6.37□□□□□ -1.39
GPN3-210ENST00000552180 KRTAP5-5Q701N2 237 aaPredicted RBP6.31□□□□□ -1.4
GPN3-210ENST00000552180 KRTAP4-6Q9BYQ5 205 aa6.31□□□□□ -1.4
GPN3-210ENST00000552180 LOC100996750A0A140TA64 210 aa6.25□□□□□ -1.41
GPN3-210ENST00000552180 LCE3CQ5T5A8 94 aa6.25□□□□□ -1.41
GPN3-210ENST00000552180 AHNAK2Q8IVF2 5795 aa6.23□□□□□ -1.41
GPN3-210ENST00000552180 SYNE1Q8NF91 8797 aaKnown RBP6.12□□□□□ -1.43
GPN3-210ENST00000552180 KRTAP20-2Q3LI61 65 aa6.08□□□□□ -1.44
GPN3-210ENST00000552180 SPRR5A0A1B0GTR4 108 aa6.07□□□□□ -1.44
GPN3-210ENST00000552180 KRTAP12-4P60329 112 aa6.04□□□□□ -1.44
GPN3-210ENST00000552180 KRTAP5-10Q6L8G5 202 aa5.98□□□□□ -1.45
GPN3-210ENST00000552180 KRTAP9-6A8MVA2 160 aa5.95□□□□□ -1.46
GPN3-210ENST00000552180 KRTAP5-3Q6L8H2 238 aa5.93□□□□□ -1.46
GPN3-210ENST00000552180 MT1AP04731 61 aa5.89□□□□□ -1.47
GPN3-210ENST00000552180 KRTAP6-1Q3LI64 71 aa5.86□□□□□ -1.47
GPN3-210ENST00000552180 BRK1Q8WUW1 75 aa5.86□□□□□ -1.47
GPN3-210ENST00000552180 KRTAP5-7Q6L8G8 165 aa5.73□□□□□ -1.49
GPN3-210ENST00000552180 KRTAP5-2Q701N4 177 aa5.71□□□□□ -1.5
GPN3-210ENST00000552180 KRTAP9-4Q9BYQ2 154 aa5.69□□□□□ -1.5
GPN3-210ENST00000552180 PRO0628Q9UI54 55 aa5.62□□□□□ -1.51
GPN3-210ENST00000552180 KRTAP6-2Q3LI66 62 aa5.56□□□□□ -1.52
GPN3-210ENST00000552180 PMAIP1Q13794 54 aa5.52□□□□□ -1.53
GPN3-210ENST00000552180 KRTAP4-11Q9BYQ6 195 aa5.52□□□□□ -1.53
GPN3-210ENST00000552180 OBSCNQ5VST9 7968 aa5.4□□□□□ -1.55
GPN3-210ENST00000552180 MT3P25713 68 aa5.37□□□□□ -1.55
GPN3-210ENST00000552180 KRTAP5-8O75690 187 aa5.35□□□□□ -1.55
GPN3-210ENST00000552180 PRAC1Q96KF2 57 aa5.32□□□□□ -1.56
GPN3-210ENST00000552180 MUC5BQ9HC84 5762 aaPredicted RBP5.12□□□□□ -1.59
GPN3-210ENST00000552180 KTN1-AS1Q86SY8 53 aa5.11□□□□□ -1.59
GPN3-210ENST00000552180 AHNAKQ09666 5890 aaKnown RBP5.09□□□□□ -1.59
GPN3-210ENST00000552180 KRTAP5-1Q6L8H4 278 aa5.09□□□□□ -1.59
GPN3-210ENST00000552180 MUC5ACP98088 5654 aa5.08□□□□□ -1.6
GPN3-210ENST00000552180 KRTAP9-9Q9BYP9 154 aa4.99□□□□□ -1.61
GPN3-210ENST00000552180 LCE1EQ5T753 118 aa4.92□□□□□ -1.62
GPN3-210ENST00000552180 KRTAP4-2Q9BYR5 136 aa4.64□□□□□ -1.67
GPN3-210ENST00000552180 LCE1BQ5T7P3 118 aa4.58□□□□□ -1.68
GPN3-210ENST00000552180 LCE1CQ5T751 118 aa4.57□□□□□ -1.68
GPN3-210ENST00000552180 H3BS24 57 aa4.56□□□□□ -1.68
GPN3-210ENST00000552180 LCE3DQ9BYE3 92 aa4.53□□□□□ -1.68
GPN3-210ENST00000552180 LUZP6Q538Z0 58 aa4.41□□□□□ -1.7
GPN3-210ENST00000552180 LCE3EQ5T5B0 92 aa4.27□□□□□ -1.73
GPN3-210ENST00000552180 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.19□□□□□ -1.74
GPN3-210ENST00000552180 KRTAP4-12Q9BQ66 201 aa4.13□□□□□ -1.75
GPN3-210ENST00000552180 KRTAP5-11Q6L8G4 156 aa4.12□□□□□ -1.75
GPN3-210ENST00000552180 NDUFAF8A1L188 74 aa4□□□□□ -1.77
GPN3-210ENST00000552180 LCE1FQ5T754 118 aa3.97□□□□□ -1.77
GPN3-210ENST00000552180 A0A0A0MQY5 61 aa3.88□□□□□ -1.79
GPN3-210ENST00000552180 KRTAP21-2Q3LI59 83 aa3.88□□□□□ -1.79
GPN3-210ENST00000552180 PHGR1C9JFL3 82 aa3.56□□□□□ -1.84
GPN3-210ENST00000552180 INE1O15225 51 aa3.52□□□□□ -1.85
GPN3-210ENST00000552180 KRTAP4-4Q9BYR3 166 aa3.5□□□□□ -1.85
GPN3-210ENST00000552180 MUC19Q7Z5P9 8384 aa3.32□□□□□ -1.88
GPN3-210ENST00000552180 PRM1P04553 51 aa3.28□□□□□ -1.88
GPN3-210ENST00000552180 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
GPN3-210ENST00000552180 MUC16Q8WXI7 14507 aa2.34□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 95.9 ms