RNA–Protein interactions for RNA: ENST00000552009.1

GNPTAB-209, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 601 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-209ENST00000552009 SPRR2FQ96RM1 72 aa2.92□□□□□ -1.94
GNPTAB-209ENST00000552009 SPTSSBQ8NFR3 76 aa2.91□□□□□ -1.94
GNPTAB-209ENST00000552009 SPRR2EP22531 72 aa2.9□□□□□ -1.95
GNPTAB-209ENST00000552009 SPRR2BP35325 72 aa2.9□□□□□ -1.95
GNPTAB-209ENST00000552009 SPRR2AP35326 72 aa2.9□□□□□ -1.95
GNPTAB-209ENST00000552009 KRTAP2-3P0C7H8 128 aa2.89□□□□□ -1.95
GNPTAB-209ENST00000552009 PRR15LQ9BU68 103 aa2.89□□□□□ -1.95
GNPTAB-209ENST00000552009 KRTAP2-4Q9BYR9 128 aa2.89□□□□□ -1.95
GNPTAB-209ENST00000552009 MT1XP80297 61 aa2.88□□□□□ -1.95
GNPTAB-209ENST00000552009 LINC01558Q9Y6Z2 57 aa2.88□□□□□ -1.95
GNPTAB-209ENST00000552009 ADM2Q7Z4H4 148 aa2.87□□□□□ -1.95
GNPTAB-209ENST00000552009 CRIPTQ9P021 101 aa2.87□□□□□ -1.95
GNPTAB-209ENST00000552009 KRTAP8-1Q8IUC2 63 aa2.85□□□□□ -1.95
GNPTAB-209ENST00000552009 PSPHP1O15172 72 aa2.83□□□□□ -1.96
GNPTAB-209ENST00000552009 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
GNPTAB-209ENST00000552009 SEC61GP60059 68 aa2.82□□□□□ -1.96
GNPTAB-209ENST00000552009 PRO0628Q9UI54 55 aa2.82□□□□□ -1.96
GNPTAB-209ENST00000552009 A0A1B0GU69 56 aa2.81□□□□□ -1.96
GNPTAB-209ENST00000552009 H0YAA0 97 aa2.81□□□□□ -1.96
GNPTAB-209ENST00000552009 SPRR2DP22532 72 aa2.81□□□□□ -1.96
GNPTAB-209ENST00000552009 KRTAP5-7Q6L8G8 165 aa2.81□□□□□ -1.96
GNPTAB-209ENST00000552009 BRK1Q8WUW1 75 aa2.81□□□□□ -1.96
GNPTAB-209ENST00000552009 PRO2289Q9P1D8 64 aa2.81□□□□□ -1.96
GNPTAB-209ENST00000552009 A6NED7 52 aa2.8□□□□□ -1.96
GNPTAB-209ENST00000552009 P0C880 135 aa2.8□□□□□ -1.96
GNPTAB-209ENST00000552009 PLAC4Q8WY50 150 aa2.8□□□□□ -1.96
GNPTAB-209ENST00000552009 M0QZ58 72 aa2.78□□□□□ -1.96
GNPTAB-209ENST00000552009 LINC01554Q52M75 96 aa2.78□□□□□ -1.96
GNPTAB-209ENST00000552009 KRTAP2-1Q9BYU5 128 aa2.78□□□□□ -1.96
GNPTAB-209ENST00000552009 CDC42SE1Q9NRR8 79 aa2.78□□□□□ -1.96
GNPTAB-209ENST00000552009 R4GN34 69 aa2.77□□□□□ -1.97
GNPTAB-209ENST00000552009 SPRR5A0A1B0GTR4 108 aa2.76□□□□□ -1.97
GNPTAB-209ENST00000552009 UQCR11O14957 56 aa2.76□□□□□ -1.97
GNPTAB-209ENST00000552009 MIR22HGQ0VDD5 57 aa2.71□□□□□ -1.98
GNPTAB-209ENST00000552009 SPATA8Q6RVD6 105 aa2.7□□□□□ -1.98
GNPTAB-209ENST00000552009 GPR98Q8WXG9 6306 aa2.69□□□□□ -1.98
GNPTAB-209ENST00000552009 A0A1B0GU33 70 aa2.69□□□□□ -1.98
GNPTAB-209ENST00000552009 K7ERS5 55 aa2.66□□□□□ -1.98
GNPTAB-209ENST00000552009 PMAIP1Q13794 54 aa2.65□□□□□ -1.99
GNPTAB-209ENST00000552009 DSTQ03001 7570 aaKnown RBP2.64□□□□□ -1.99
GNPTAB-209ENST00000552009 KTN1-AS1Q86SY8 53 aa2.61□□□□□ -1.99
GNPTAB-209ENST00000552009 KRTAP13-4Q3LI77 160 aa2.58□□□□□ -2
GNPTAB-209ENST00000552009 KRTAP19-7Q3SYF9 63 aa2.57□□□□□ -2
GNPTAB-209ENST00000552009 MT1EP04732 61 aa2.55□□□□□ -2
GNPTAB-209ENST00000552009 KRTAP19-3Q7Z4W3 81 aa2.54□□□□□ -2
GNPTAB-209ENST00000552009 CAMK2N1Q7Z7J9 78 aa2.54□□□□□ -2
GNPTAB-209ENST00000552009 A0A0D9SG42 100 aa2.53□□□□□ -2
GNPTAB-209ENST00000552009 MT4P47944 62 aa2.5□□□□□ -2.01
GNPTAB-209ENST00000552009 ROMO1P60602 79 aa2.5□□□□□ -2.01
GNPTAB-209ENST00000552009 KRTAP19-5Q3LI72 72 aa2.5□□□□□ -2.01
GNPTAB-209ENST00000552009 KRTAP12-1P59990 96 aa2.49□□□□□ -2.01
GNPTAB-209ENST00000552009 HMCN1Q96RW7 5635 aa2.48□□□□□ -2.01
GNPTAB-209ENST00000552009 SPINT4Q6UDR6 99 aa2.47□□□□□ -2.01
GNPTAB-209ENST00000552009 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
GNPTAB-209ENST00000552009 MT1MQ8N339 61 aa2.45□□□□□ -2.02
GNPTAB-209ENST00000552009 AHNAK2Q8IVF2 5795 aa2.44□□□□□ -2.02
GNPTAB-209ENST00000552009 MT1GP13640 62 aa2.43□□□□□ -2.02
GNPTAB-209ENST00000552009 KRTAP25-1Q3LHN0 102 aa2.42□□□□□ -2.02
GNPTAB-209ENST00000552009 MT1LQ93083 61 aa2.42□□□□□ -2.02
GNPTAB-209ENST00000552009 KRTAP5-10Q6L8G5 202 aa2.38□□□□□ -2.03
GNPTAB-209ENST00000552009 C10orf95Q9H7T3 257 aa2.37□□□□□ -2.03
GNPTAB-209ENST00000552009 TNP1P09430 55 aa2.32□□□□□ -2.04
GNPTAB-209ENST00000552009 KRTAP12-4P60329 112 aa2.3□□□□□ -2.04
GNPTAB-209ENST00000552009 KRTAP20-2Q3LI61 65 aa2.27□□□□□ -2.05
GNPTAB-209ENST00000552009 KRTAP12-3P60328 96 aa2.25□□□□□ -2.05
GNPTAB-209ENST00000552009 SYNE1Q8NF91 8797 aaKnown RBP2.24□□□□□ -2.05
GNPTAB-209ENST00000552009 KRTAP6-1Q3LI64 71 aa2.08□□□□□ -2.08
GNPTAB-209ENST00000552009 LUZP6Q538Z0 58 aa2.08□□□□□ -2.08
GNPTAB-209ENST00000552009 AHNAKQ09666 5890 aaKnown RBP2.05□□□□□ -2.08
GNPTAB-209ENST00000552009 MT1AP04731 61 aa2.04□□□□□ -2.08
GNPTAB-209ENST00000552009 MUC5ACP98088 5654 aa2.03□□□□□ -2.08
GNPTAB-209ENST00000552009 KRTAP6-2Q3LI66 62 aa2.01□□□□□ -2.09
GNPTAB-209ENST00000552009 MUC5BQ9HC84 5762 aaPredicted RBP1.99□□□□□ -2.09
GNPTAB-209ENST00000552009 INE1O15225 51 aa1.74□□□□□ -2.13
GNPTAB-209ENST00000552009 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
GNPTAB-209ENST00000552009 PRM1P04553 51 aa1.28□□□□□ -2.2
GNPTAB-209ENST00000552009 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
GNPTAB-209ENST00000552009 KRTAP21-1Q3LI58 79 aa1.02□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 169 ms