RNA–Protein interactions for RNA: ENST00000552009.1

GNPTAB-209, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 601 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-209ENST00000552009 AEBP2Q6ZN18 517 aaPredicted RBP32.32■■■□□ 2.76
GNPTAB-209ENST00000552009 CHIC1Q5VXU3 224 aa31.11■■■□□ 2.57
GNPTAB-209ENST00000552009 SENP3Q9H4L4 574 aaPredicted RBP27.69■■■□□ 2.02
GNPTAB-209ENST00000552009 PHF23Q9BUL5 403 aaPredicted RBP27.32■■□□□ 1.96
GNPTAB-209ENST00000552009 FOXD1Q16676 465 aa25.65■■□□□ 1.7
GNPTAB-209ENST00000552009 PLPPR3Q6T4P5 718 aa25.09■■□□□ 1.61
GNPTAB-209ENST00000552009 ADRA2BP18089 450 aa24.19■■□□□ 1.46
GNPTAB-209ENST00000552009 PPP6R1Q9UPN7 881 aa24.19■■□□□ 1.46
GNPTAB-209ENST00000552009 PIAS4Q8N2W9 510 aaPredicted RBP24.14■■□□□ 1.45
GNPTAB-209ENST00000552009 MSH5O43196 834 aa24.02■■□□□ 1.44
GNPTAB-209ENST00000552009 POTEDQ86YR6 584 aa22.75■■□□□ 1.23
GNPTAB-209ENST00000552009 SCAF1Q9H7N4 1312 aaKnown RBP22.32■■□□□ 1.16
GNPTAB-209ENST00000552009 MAPK8IP2Q13387 824 aaPredicted RBP22.09■■□□□ 1.13
GNPTAB-209ENST00000552009 PPP4R3CPQ6ZMV5 832 aa21.99■■□□□ 1.11
GNPTAB-209ENST00000552009 DMRT2Q9Y5R5 561 aa21.96■■□□□ 1.11
GNPTAB-209ENST00000552009 CNKSR2Q8WXI2 1034 aa21.54■■□□□ 1.04
GNPTAB-209ENST00000552009 NCBP3Q53F19 620 aaKnown RBP21.38■■□□□ 1.01
GNPTAB-209ENST00000552009 HOXD11P31277 338 aaPredicted RBP21.26■□□□□ 0.99
GNPTAB-209ENST00000552009 RNF216Q9NWF9 866 aaPredicted RBP21.24■□□□□ 0.99
GNPTAB-209ENST00000552009 DCAF8L1A6NGE4 600 aa21.14■□□□□ 0.97
GNPTAB-209ENST00000552009 NPM3O75607 178 aaKnown RBP20.9■□□□□ 0.94
GNPTAB-209ENST00000552009 KCNA4P22459 653 aa20.78■□□□□ 0.92
GNPTAB-209ENST00000552009 DNAJC5BQ9UF47 199 aa20.52■□□□□ 0.88
GNPTAB-209ENST00000552009 RNF39Q9H2S5 420 aa20.44■□□□□ 0.86
GNPTAB-209ENST00000552009 CACNB1Q02641 598 aaPredicted RBP20.41■□□□□ 0.86
GNPTAB-209ENST00000552009 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.38■□□□□ 0.85
GNPTAB-209ENST00000552009 C1QBPQ07021 282 aaKnown RBP20.23■□□□□ 0.83
GNPTAB-209ENST00000552009 U3KPZ7 1027 aaPredicted RBP19.85■□□□□ 0.77
GNPTAB-209ENST00000552009 SLC4A2P04920 1241 aa19.82■□□□□ 0.76
GNPTAB-209ENST00000552009 SLC4A1APQ9BWU0 796 aaKnown RBP19.78■□□□□ 0.76
GNPTAB-209ENST00000552009 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.6■□□□□ 0.73
GNPTAB-209ENST00000552009 HNRNPUL2Q1KMD3 747 aaKnown RBP19.6■□□□□ 0.73
GNPTAB-209ENST00000552009 APLP2Q06481 763 aa19.58■□□□□ 0.72
GNPTAB-209ENST00000552009 CAPN15O75808 1086 aa19.53■□□□□ 0.72
GNPTAB-209ENST00000552009 SAMD1Q6SPF0 538 aaPredicted RBP19.46■□□□□ 0.71
GNPTAB-209ENST00000552009 SPINK5Q9NQ38 1064 aaPredicted RBP19.46■□□□□ 0.71
GNPTAB-209ENST00000552009 MYCNP04198 464 aaPredicted RBP19.41■□□□□ 0.7
GNPTAB-209ENST00000552009 FOXD4L1Q9NU39 408 aa19.37■□□□□ 0.69
GNPTAB-209ENST00000552009 ZNF219Q9P2Y4 722 aaPredicted RBP19.31■□□□□ 0.68
GNPTAB-209ENST00000552009 TRHP20396 242 aaPredicted RBP19.29■□□□□ 0.68
GNPTAB-209ENST00000552009 DSG3P32926 999 aa19.24■□□□□ 0.67
GNPTAB-209ENST00000552009 ABCB7O75027 752 aa19.04■□□□□ 0.64
GNPTAB-209ENST00000552009 ZBTB22O15209 634 aa19.03■□□□□ 0.64
GNPTAB-209ENST00000552009 POLA2Q14181 598 aa18.81■□□□□ 0.6
GNPTAB-209ENST00000552009 ATXN8OSP0DMR3 200 aa18.78■□□□□ 0.6
GNPTAB-209ENST00000552009 ATF5Q9Y2D1 282 aaPredicted RBP18.78■□□□□ 0.6
GNPTAB-209ENST00000552009 ZBTB12Q9Y330 459 aaPredicted RBP18.58■□□□□ 0.56
GNPTAB-209ENST00000552009 EHMT2Q96KQ7 1210 aa18.53■□□□□ 0.56
GNPTAB-209ENST00000552009 CSRNP3Q8WYN3 585 aa18.52■□□□□ 0.56
GNPTAB-209ENST00000552009 RBM42Q9BTD8 480 aaKnown RBP18.5■□□□□ 0.55
GNPTAB-209ENST00000552009 FBLN2P98095 1184 aa18.26■□□□□ 0.51
GNPTAB-209ENST00000552009 OSCARQ8IYS5 282 aa18.17■□□□□ 0.5
GNPTAB-209ENST00000552009 AKT1S1Q96B36 256 aa18.09■□□□□ 0.49
GNPTAB-209ENST00000552009 SPDYE2BA6NHP3 402 aa17.96■□□□□ 0.47
GNPTAB-209ENST00000552009 SPDYE6P0CI01 402 aa17.96■□□□□ 0.47
GNPTAB-209ENST00000552009 SPDYE2Q495Y8 402 aa17.96■□□□□ 0.47
GNPTAB-209ENST00000552009 MKRN4PQ13434 485 aaPredicted RBP17.94■□□□□ 0.46
GNPTAB-209ENST00000552009 POTEHQ6S545 545 aa17.94■□□□□ 0.46
GNPTAB-209ENST00000552009 CHRDL2Q6WN34 429 aa17.87■□□□□ 0.45
GNPTAB-209ENST00000552009 REM2Q8IYK8 340 aaPredicted RBP17.87■□□□□ 0.45
GNPTAB-209ENST00000552009 ZNF692Q9BU19 519 aaPredicted RBP17.81■□□□□ 0.44
GNPTAB-209ENST00000552009 SSUH2Q9Y2M2 353 aa17.68■□□□□ 0.42
GNPTAB-209ENST00000552009 PITPNM1O00562 1244 aa17.65■□□□□ 0.42
GNPTAB-209ENST00000552009 SPDYE1Q8NFV5 336 aaPredicted RBP17.6■□□□□ 0.41
GNPTAB-209ENST00000552009 CLEC11AQ9Y240 323 aa17.53■□□□□ 0.4
GNPTAB-209ENST00000552009 PABPN1Q86U42 306 aaKnown RBP eCLIP17.52■□□□□ 0.4
GNPTAB-209ENST00000552009 PIP4P2Q8N4L2 257 aa17.48■□□□□ 0.39
GNPTAB-209ENST00000552009 FXR2P51116 673 aaKnown RBP eCLIP17.44■□□□□ 0.38
GNPTAB-209ENST00000552009 SPDYE4A6NLX3 237 aa17.4■□□□□ 0.38
GNPTAB-209ENST00000552009 PRR29P0C7W0 189 aa17.31■□□□□ 0.36
GNPTAB-209ENST00000552009 PRKAR2AP13861 404 aaKnown RBP17.25■□□□□ 0.35
GNPTAB-209ENST00000552009 STAG3Q9UJ98 1225 aa17.21■□□□□ 0.35
GNPTAB-209ENST00000552009 HAX1O00165 279 aa17.16■□□□□ 0.34
GNPTAB-209ENST00000552009 NISCHQ9Y2I1 1504 aa17.15■□□□□ 0.34
GNPTAB-209ENST00000552009 CHADLQ6NUI6 762 aa17.07■□□□□ 0.32
GNPTAB-209ENST00000552009 SP7Q8TDD2 431 aaPredicted RBP16.99■□□□□ 0.31
GNPTAB-209ENST00000552009 PROM2Q8N271 834 aa16.93■□□□□ 0.3
GNPTAB-209ENST00000552009 FARP1Q9Y4F1 1045 aaPredicted RBP16.9■□□□□ 0.3
GNPTAB-209ENST00000552009 C19orf67A6NJJ6 358 aa16.86■□□□□ 0.29
GNPTAB-209ENST00000552009 FKBP8Q14318 412 aa16.86■□□□□ 0.29
GNPTAB-209ENST00000552009 CREBZFQ9NS37 354 aa16.84■□□□□ 0.29
GNPTAB-209ENST00000552009 EVX2Q03828 476 aa16.79■□□□□ 0.28
GNPTAB-209ENST00000552009 CD44P16070 742 aaKnown RBP16.73■□□□□ 0.27
GNPTAB-209ENST00000552009 NPM1P06748 294 aaKnown RBP eCLIP16.71■□□□□ 0.27
GNPTAB-209ENST00000552009 PLEKHG5O94827 1062 aa16.7■□□□□ 0.26
GNPTAB-209ENST00000552009 PAK3O75914 559 aaPredicted RBP16.61■□□□□ 0.25
GNPTAB-209ENST00000552009 MIER1Q8N108 512 aa16.61■□□□□ 0.25
GNPTAB-209ENST00000552009 ZRANB1Q9UGI0 708 aa16.56■□□□□ 0.24
GNPTAB-209ENST00000552009 GABBR2O75899 941 aa16.54■□□□□ 0.24
GNPTAB-209ENST00000552009 MNX1P50219 401 aaPredicted RBP16.54■□□□□ 0.24
GNPTAB-209ENST00000552009 CLCN6P51797 869 aa16.54■□□□□ 0.24
GNPTAB-209ENST00000552009 PLCD3Q8N3E9 789 aa16.54■□□□□ 0.24
GNPTAB-209ENST00000552009 FBXO3Q9UK99 471 aa16.53■□□□□ 0.24
GNPTAB-209ENST00000552009 ZNF579Q8NAF0 562 aaKnown RBP16.46■□□□□ 0.23
GNPTAB-209ENST00000552009 ZBTB47Q9UFB7 747 aaPredicted RBP16.45■□□□□ 0.22
GNPTAB-209ENST00000552009 TSPYL2Q9H2G4 693 aaPredicted RBP16.33■□□□□ 0.2
GNPTAB-209ENST00000552009 PHF12Q96QT6 1004 aa16.29■□□□□ 0.2
GNPTAB-209ENST00000552009 DCBLD2Q96PD2 775 aa16.28■□□□□ 0.2
GNPTAB-209ENST00000552009 VASPP50552 380 aaPredicted RBP16.21■□□□□ 0.19
GNPTAB-209ENST00000552009 GALR2O43603 387 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms