RNA–Protein interactions for RNA: ENST00000551483.5

CNOT2-231, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2 BASIC

Gene CNOT2, Length 4,753 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-231	ENST00000551483	DYNC1H1	Q14204	4646 aa	Known RBP	0.99	□□□□□ -2.25
CNOT2-231	ENST00000551483	KRTAP4-3	Q9BYR4	195 aa		0.99	□□□□□ -2.25
CNOT2-231	ENST00000551483	KRTAP6-2	Q3LI66	62 aa		0.99	□□□□□ -2.25
CNOT2-231	ENST00000551483	DNAH5	Q8TE73	4624 aa		0.98	□□□□□ -2.25
CNOT2-231	ENST00000551483	KRTAP19-3	Q7Z4W3	81 aa		0.98	□□□□□ -2.25
CNOT2-231	ENST00000551483	LRP1	Q07954	4544 aa	Known RBP	0.98	□□□□□ -2.25
CNOT2-231	ENST00000551483	CRCT1	Q9UGL9	99 aa		0.97	□□□□□ -2.25
CNOT2-231	ENST00000551483	PKHD1	P08F94	4074 aa		0.96	□□□□□ -2.26
CNOT2-231	ENST00000551483	LPA	P08519	4548 aa		0.96	□□□□□ -2.26
CNOT2-231	ENST00000551483	MT1A	P04731	61 aa		0.94	□□□□□ -2.26
CNOT2-231	ENST00000551483	SPRR2D	P22532	72 aa		0.93	□□□□□ -2.26
CNOT2-231	ENST00000551483	MUC17	Q685J3	4493 aa		0.92	□□□□□ -2.26
CNOT2-231	ENST00000551483	AHNAK2	Q8IVF2	5795 aa		0.9	□□□□□ -2.27
CNOT2-231	ENST00000551483	AHNAK	Q09666	5890 aa	Known RBP	0.89	□□□□□ -2.27
CNOT2-231	ENST00000551483	SPRR2G	Q9BYE4	73 aa		0.89	□□□□□ -2.27
CNOT2-231	ENST00000551483	STARD9	Q9P2P6	4700 aa		0.88	□□□□□ -2.27
CNOT2-231	ENST00000551483	SPRR2B	P35325	72 aa		0.88	□□□□□ -2.27
CNOT2-231	ENST00000551483	SPRR2F	Q96RM1	72 aa		0.87	□□□□□ -2.27
CNOT2-231	ENST00000551483	SPRR2A	P35326	72 aa		0.87	□□□□□ -2.27
CNOT2-231	ENST00000551483	LRP1B	Q9NZR2	4599 aa		0.86	□□□□□ -2.27
CNOT2-231	ENST00000551483	HERC1	Q15751	4861 aa		0.86	□□□□□ -2.27
CNOT2-231	ENST00000551483	KRTAP5-7	Q6L8G8	165 aa		0.85	□□□□□ -2.27
CNOT2-231	ENST00000551483	MT1X	P80297	61 aa		0.83	□□□□□ -2.28
CNOT2-231	ENST00000551483	MT1L	Q93083	61 aa		0.82	□□□□□ -2.28
CNOT2-231	ENST00000551483	MT1E	P04732	61 aa		0.82	□□□□□ -2.28
CNOT2-231	ENST00000551483	SPRR2E	P22531	72 aa		0.82	□□□□□ -2.28
CNOT2-231	ENST00000551483	MT1G	P13640	62 aa		0.82	□□□□□ -2.28
CNOT2-231	ENST00000551483	RYR2	Q92736	4967 aa		0.8	□□□□□ -2.28
CNOT2-231	ENST00000551483	KMT2C	Q8NEZ4	4911 aa	Known RBP	0.8	□□□□□ -2.28
CNOT2-231	ENST00000551483	LRP2	P98164	4655 aa		0.79	□□□□□ -2.28
CNOT2-231	ENST00000551483	MUC2	Q02817	5179 aa		0.77	□□□□□ -2.29
CNOT2-231	ENST00000551483	KRTAP21-1	Q3LI58	79 aa		0.77	□□□□□ -2.29
CNOT2-231	ENST00000551483	SYNE2	Q8WXH0	6885 aa	Known RBP	0.76	□□□□□ -2.29
CNOT2-231	ENST00000551483	MUC5AC	P98088	5654 aa		0.76	□□□□□ -2.29
CNOT2-231	ENST00000551483	RYR3	Q15413	4870 aa		0.75	□□□□□ -2.29
CNOT2-231	ENST00000551483	KRTAP19-8	Q3LI54	63 aa		0.75	□□□□□ -2.29
CNOT2-231	ENST00000551483	MT1H	P80294	61 aa		0.75	□□□□□ -2.29
CNOT2-231	ENST00000551483	HYDIN	Q4G0P3	5121 aa		0.73	□□□□□ -2.29
CNOT2-231	ENST00000551483	NEB	P20929	6669 aa		0.72	□□□□□ -2.29
CNOT2-231	ENST00000551483	RYR1	P21817	5038 aa		0.72	□□□□□ -2.29
CNOT2-231	ENST00000551483	KRTAP19-7	Q3SYF9	63 aa		0.71	□□□□□ -2.3
CNOT2-231	ENST00000551483	MT1B	P07438	61 aa		0.71	□□□□□ -2.3
CNOT2-231	ENST00000551483	USH2A	O75445	5202 aa		0.7	□□□□□ -2.3
CNOT2-231	ENST00000551483	KRTAP4-1	Q9BYQ7	146 aa		0.7	□□□□□ -2.3
CNOT2-231	ENST00000551483	PCLO	Q9Y6V0	5065 aa		0.69	□□□□□ -2.3
CNOT2-231	ENST00000551483	DNHD1	Q96M86	4753 aa		0.69	□□□□□ -2.3
CNOT2-231	ENST00000551483	HERC2	O95714	4834 aa		0.69	□□□□□ -2.3
CNOT2-231	ENST00000551483	BIRC6	Q9NR09	4857 aa		0.68	□□□□□ -2.3
CNOT2-231	ENST00000551483	KRTAP19-2	Q3LHN2	52 aa		0.68	□□□□□ -2.3
CNOT2-231	ENST00000551483	KRTAP6-1	Q3LI64	71 aa		0.66	□□□□□ -2.3
CNOT2-231	ENST00000551483	MACF1	Q9UPN3	7388 aa	Known RBP	0.65	□□□□□ -2.31
CNOT2-231	ENST00000551483	HMCN2	Q8NDA2	5059 aa		0.65	□□□□□ -2.31
CNOT2-231	ENST00000551483	ABCA13	Q86UQ4	5058 aa		0.65	□□□□□ -2.31
CNOT2-231	ENST00000551483	MDN1	Q9NU22	5596 aa		0.64	□□□□□ -2.31
CNOT2-231	ENST00000551483	KIAA1109	Q2LD37	5005 aa		0.64	□□□□□ -2.31
CNOT2-231	ENST00000551483	MT1F	P04733	61 aa		0.63	□□□□□ -2.31
CNOT2-231	ENST00000551483	MT1M	Q8N339	61 aa		0.63	□□□□□ -2.31
CNOT2-231	ENST00000551483	EPPK1	P58107	5090 aa	Known RBP	0.63	□□□□□ -2.31
CNOT2-231	ENST00000551483	MT2A	P02795	61 aa		0.62	□□□□□ -2.31
CNOT2-231	ENST00000551483	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	0.62	□□□□□ -2.31
CNOT2-231	ENST00000551483	MT1HL1	P0DM35	61 aa		0.61	□□□□□ -2.31
CNOT2-231	ENST00000551483	SSPO	A2VEC9	5147 aa		0.6	□□□□□ -2.31
CNOT2-231	ENST00000551483	FAT4	Q6V0I7	4981 aa		0.6	□□□□□ -2.31
CNOT2-231	ENST00000551483	KRTAP5-10	Q6L8G5	202 aa		0.59	□□□□□ -2.31
CNOT2-231	ENST00000551483	KMT2D	O14686	5537 aa		0.59	□□□□□ -2.31
CNOT2-231	ENST00000551483	RNF213	Q63HN8	5207 aa		0.59	□□□□□ -2.32
CNOT2-231	ENST00000551483	UBR4	Q5T4S7	5183 aa		0.59	□□□□□ -2.32
CNOT2-231	ENST00000551483	KRTAP21-2	Q3LI59	83 aa		0.57	□□□□□ -2.32
CNOT2-231	ENST00000551483	DST	Q03001	7570 aa	Known RBP	0.55	□□□□□ -2.32
CNOT2-231	ENST00000551483	FSIP2	Q5CZC0	6907 aa		0.51	□□□□□ -2.33
CNOT2-231	ENST00000551483	KRTAP20-1	Q3LI63	56 aa		0.48	□□□□□ -2.33
CNOT2-231	ENST00000551483	MUC16	Q8WXI7	14507 aa		0.47	□□□□□ -2.33
CNOT2-231	ENST00000551483	MUC12	Q9UKN1	5478 aa		0.47	□□□□□ -2.33
CNOT2-231	ENST00000551483	PHGR1	C9JFL3	82 aa		0.37	□□□□□ -2.35
CNOT2-231	ENST00000551483	KRTAP20-2	Q3LI61	65 aa		0.34	□□□□□ -2.36
CNOT2-231	ENST00000551483	MT4	P47944	62 aa		0.27	□□□□□ -2.37
CNOT2-231	ENST00000551483	KRTAP19-6	Q3LI70	58 aa		0.26	□□□□□ -2.37

Retrieved 77 of 20,778 RNA–protein pairs in 9.3 ms