RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 KRTAP5-4Q6L8H1 288 aa6.29□□□□□ -1.4
PRPF40B-215ENST00000551418 KRTAP4-6Q9BYQ5 205 aa6.29□□□□□ -1.4
PRPF40B-215ENST00000551418 TNP1P09430 55 aa6.28□□□□□ -1.4
PRPF40B-215ENST00000551418 KRTAP5-10Q6L8G5 202 aa6.28□□□□□ -1.4
PRPF40B-215ENST00000551418 CCDC179H3BU77 68 aa6.24□□□□□ -1.41
PRPF40B-215ENST00000551418 C10orf95Q9H7T3 257 aa6.18□□□□□ -1.42
PRPF40B-215ENST00000551418 LINC01558Q9Y6Z2 57 aa6.18□□□□□ -1.42
PRPF40B-215ENST00000551418 LCE3AQ5TA76 89 aa6.17□□□□□ -1.42
PRPF40B-215ENST00000551418 TMEM258P61165 79 aa6.11□□□□□ -1.43
PRPF40B-215ENST00000551418 KRTAP4-7Q9BYR0 210 aa6.11□□□□□ -1.43
PRPF40B-215ENST00000551418 UQCR11O14957 56 aa6.1□□□□□ -1.43
PRPF40B-215ENST00000551418 KRTAP5-3Q6L8H2 238 aa6.06□□□□□ -1.44
PRPF40B-215ENST00000551418 KRTAP5-7Q6L8G8 165 aa6.05□□□□□ -1.44
PRPF40B-215ENST00000551418 KRTAP12-3P60328 96 aa5.97□□□□□ -1.45
PRPF40B-215ENST00000551418 KRTAP20-2Q3LI61 65 aa5.96□□□□□ -1.46
PRPF40B-215ENST00000551418 K7ERS5 55 aa5.93□□□□□ -1.46
PRPF40B-215ENST00000551418 MIR22HGQ0VDD5 57 aa5.92□□□□□ -1.46
PRPF40B-215ENST00000551418 KRTAP25-1Q3LHN0 102 aa5.9□□□□□ -1.46
PRPF40B-215ENST00000551418 KRTAP5-5Q701N2 237 aaPredicted RBP5.9□□□□□ -1.46
PRPF40B-215ENST00000551418 V9GYY9 64 aa5.86□□□□□ -1.47
PRPF40B-215ENST00000551418 SPRR5A0A1B0GTR4 108 aa5.84□□□□□ -1.47
PRPF40B-215ENST00000551418 LOC100996750A0A140TA64 210 aa5.8□□□□□ -1.48
PRPF40B-215ENST00000551418 KRTAP12-4P60329 112 aa5.76□□□□□ -1.49
PRPF40B-215ENST00000551418 KRTAP19-4Q3LI73 84 aa5.76□□□□□ -1.49
PRPF40B-215ENST00000551418 Q1T7F1 81 aa5.73□□□□□ -1.49
PRPF40B-215ENST00000551418 SYNE1Q8NF91 8797 aaKnown RBP5.73□□□□□ -1.49
PRPF40B-215ENST00000551418 PSPHP1O15172 72 aa5.72□□□□□ -1.49
PRPF40B-215ENST00000551418 KRTAP23-1A1A580 65 aa5.7□□□□□ -1.5
PRPF40B-215ENST00000551418 A6NED7 52 aa5.59□□□□□ -1.51
PRPF40B-215ENST00000551418 KRTAP15-1Q3LI76 137 aa5.57□□□□□ -1.52
PRPF40B-215ENST00000551418 CDC42SE1Q9NRR8 79 aa5.54□□□□□ -1.52
PRPF40B-215ENST00000551418 KRTAP4-11Q9BYQ6 195 aa5.52□□□□□ -1.53
PRPF40B-215ENST00000551418 LCE3CQ5T5A8 94 aa5.48□□□□□ -1.53
PRPF40B-215ENST00000551418 KRTAP5-2Q701N4 177 aa5.45□□□□□ -1.54
PRPF40B-215ENST00000551418 ROMO1P60602 79 aa5.42□□□□□ -1.54
PRPF40B-215ENST00000551418 KRTAP6-1Q3LI64 71 aa5.41□□□□□ -1.54
PRPF40B-215ENST00000551418 RPS28P62857 69 aaKnown RBP5.39□□□□□ -1.55
PRPF40B-215ENST00000551418 KRTAP5-8O75690 187 aa5.36□□□□□ -1.55
PRPF40B-215ENST00000551418 MT1AP04731 61 aa5.36□□□□□ -1.55
PRPF40B-215ENST00000551418 AHNAKQ09666 5890 aaKnown RBP5.32□□□□□ -1.56
PRPF40B-215ENST00000551418 MUC5ACP98088 5654 aa5.29□□□□□ -1.56
PRPF40B-215ENST00000551418 MUC5BQ9HC84 5762 aaPredicted RBP5.27□□□□□ -1.57
PRPF40B-215ENST00000551418 KRTAP9-4Q9BYQ2 154 aa5.24□□□□□ -1.57
PRPF40B-215ENST00000551418 KRTAP6-2Q3LI66 62 aa5.23□□□□□ -1.57
PRPF40B-215ENST00000551418 KRTAP9-6A8MVA2 160 aa5.2□□□□□ -1.58
PRPF40B-215ENST00000551418 OBSCNQ5VST9 7968 aa5.18□□□□□ -1.58
PRPF40B-215ENST00000551418 PCP4P48539 62 aa5.14□□□□□ -1.59
PRPF40B-215ENST00000551418 KRTAP9-9Q9BYP9 154 aa5.09□□□□□ -1.59
PRPF40B-215ENST00000551418 KRTAP5-1Q6L8H4 278 aa4.97□□□□□ -1.61
PRPF40B-215ENST00000551418 MT3P25713 68 aa4.9□□□□□ -1.63
PRPF40B-215ENST00000551418 BRK1Q8WUW1 75 aa4.68□□□□□ -1.66
PRPF40B-215ENST00000551418 LCE1EQ5T753 118 aa4.56□□□□□ -1.68
PRPF40B-215ENST00000551418 KRTAP4-2Q9BYR5 136 aa4.43□□□□□ -1.7
PRPF40B-215ENST00000551418 PMAIP1Q13794 54 aa4.41□□□□□ -1.7
PRPF40B-215ENST00000551418 LCE1BQ5T7P3 118 aa4.4□□□□□ -1.71
PRPF40B-215ENST00000551418 LCE1CQ5T751 118 aa4.25□□□□□ -1.73
PRPF40B-215ENST00000551418 PRAC1Q96KF2 57 aa4.18□□□□□ -1.74
PRPF40B-215ENST00000551418 KRTAP4-12Q9BQ66 201 aa4.18□□□□□ -1.74
PRPF40B-215ENST00000551418 PRO0628Q9UI54 55 aa3.98□□□□□ -1.77
PRPF40B-215ENST00000551418 LCE3DQ9BYE3 92 aa3.96□□□□□ -1.78
PRPF40B-215ENST00000551418 SVIPQ8NHG7 77 aa3.92□□□□□ -1.78
PRPF40B-215ENST00000551418 KRTAP5-11Q6L8G4 156 aa3.89□□□□□ -1.79
PRPF40B-215ENST00000551418 KTN1-AS1Q86SY8 53 aa3.86□□□□□ -1.79
PRPF40B-215ENST00000551418 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.82□□□□□ -1.8
PRPF40B-215ENST00000551418 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
PRPF40B-215ENST00000551418 LUZP6Q538Z0 58 aa3.73□□□□□ -1.81
PRPF40B-215ENST00000551418 LCE3EQ5T5B0 92 aa3.72□□□□□ -1.81
PRPF40B-215ENST00000551418 PHGR1C9JFL3 82 aa3.66□□□□□ -1.82
PRPF40B-215ENST00000551418 KRTAP21-2Q3LI59 83 aa3.57□□□□□ -1.84
PRPF40B-215ENST00000551418 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
PRPF40B-215ENST00000551418 MUC19Q7Z5P9 8384 aa3.21□□□□□ -1.89
PRPF40B-215ENST00000551418 H3BS24 57 aa3.17□□□□□ -1.9
PRPF40B-215ENST00000551418 A0A0A0MQY5 61 aa2.9□□□□□ -1.95
PRPF40B-215ENST00000551418 NDUFAF8A1L188 74 aa2.75□□□□□ -1.97
PRPF40B-215ENST00000551418 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
PRPF40B-215ENST00000551418 PRM1P04553 51 aa2.73□□□□□ -1.97
PRPF40B-215ENST00000551418 MUC16Q8WXI7 14507 aa2.3□□□□□ -2.04
PRPF40B-215ENST00000551418 INE1O15225 51 aa2.27□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 93.9 ms