RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 V9GYY9 64 aa6.7□□□□□ -1.34
DDX54-208ENST00000551344 Q1T7F1 81 aa6.63□□□□□ -1.35
DDX54-208ENST00000551344 K7ERS5 55 aa6.62□□□□□ -1.35
DDX54-208ENST00000551344 PSPHP1O15172 72 aa6.6□□□□□ -1.35
DDX54-208ENST00000551344 KRTAP12-3P60328 96 aa6.6□□□□□ -1.35
DDX54-208ENST00000551344 KRTAP4-9Q9BYQ8 210 aa6.58□□□□□ -1.36
DDX54-208ENST00000551344 KRTAP25-1Q3LHN0 102 aa6.57□□□□□ -1.36
DDX54-208ENST00000551344 KRTAP4-3Q9BYR4 195 aa6.52□□□□□ -1.37
DDX54-208ENST00000551344 LCE4AQ5TA78 99 aa6.5□□□□□ -1.37
DDX54-208ENST00000551344 LCE1DQ5T752 114 aa6.44□□□□□ -1.38
DDX54-208ENST00000551344 A6NED7 52 aa6.4□□□□□ -1.38
DDX54-208ENST00000551344 KRTAP4-7Q9BYR0 210 aa6.4□□□□□ -1.38
DDX54-208ENST00000551344 KRTAP5-4Q6L8H1 288 aa6.38□□□□□ -1.39
DDX54-208ENST00000551344 KRTAP23-1A1A580 65 aa6.37□□□□□ -1.39
DDX54-208ENST00000551344 MT4P47944 62 aa6.37□□□□□ -1.39
DDX54-208ENST00000551344 RPS28P62857 69 aaKnown RBP6.35□□□□□ -1.39
DDX54-208ENST00000551344 KRTAP19-4Q3LI73 84 aa6.32□□□□□ -1.4
DDX54-208ENST00000551344 CDC42SE1Q9NRR8 79 aa6.25□□□□□ -1.41
DDX54-208ENST00000551344 HMCN1Q96RW7 5635 aa6.24□□□□□ -1.41
DDX54-208ENST00000551344 PCP4P48539 62 aa6.23□□□□□ -1.41
DDX54-208ENST00000551344 GPR98Q8WXG9 6306 aa6.23□□□□□ -1.41
DDX54-208ENST00000551344 KRTAP4-6Q9BYQ5 205 aa6.22□□□□□ -1.41
DDX54-208ENST00000551344 KRTAP15-1Q3LI76 137 aa6.2□□□□□ -1.42
DDX54-208ENST00000551344 ROMO1P60602 79 aa6.16□□□□□ -1.42
DDX54-208ENST00000551344 KRTAP5-5Q701N2 237 aaPredicted RBP6.16□□□□□ -1.42
DDX54-208ENST00000551344 LCE3CQ5T5A8 94 aa6.08□□□□□ -1.44
DDX54-208ENST00000551344 LOC100996750A0A140TA64 210 aa6.07□□□□□ -1.44
DDX54-208ENST00000551344 SPRR5A0A1B0GTR4 108 aa6.02□□□□□ -1.45
DDX54-208ENST00000551344 KRTAP12-4P60329 112 aa6.02□□□□□ -1.45
DDX54-208ENST00000551344 KRTAP20-2Q3LI61 65 aa6□□□□□ -1.45
DDX54-208ENST00000551344 AHNAK2Q8IVF2 5795 aa5.96□□□□□ -1.46
DDX54-208ENST00000551344 KRTAP5-10Q6L8G5 202 aa5.96□□□□□ -1.46
DDX54-208ENST00000551344 SYNE1Q8NF91 8797 aaKnown RBP5.93□□□□□ -1.46
DDX54-208ENST00000551344 KRTAP5-3Q6L8H2 238 aa5.85□□□□□ -1.47
DDX54-208ENST00000551344 MT1AP04731 61 aa5.76□□□□□ -1.49
DDX54-208ENST00000551344 KRTAP5-7Q6L8G8 165 aa5.73□□□□□ -1.49
DDX54-208ENST00000551344 KRTAP9-6A8MVA2 160 aa5.71□□□□□ -1.5
DDX54-208ENST00000551344 KRTAP6-1Q3LI64 71 aa5.7□□□□□ -1.5
DDX54-208ENST00000551344 KRTAP5-2Q701N4 177 aa5.6□□□□□ -1.51
DDX54-208ENST00000551344 KRTAP9-4Q9BYQ2 154 aa5.58□□□□□ -1.52
DDX54-208ENST00000551344 BRK1Q8WUW1 75 aa5.52□□□□□ -1.53
DDX54-208ENST00000551344 KRTAP4-11Q9BYQ6 195 aa5.48□□□□□ -1.53
DDX54-208ENST00000551344 KRTAP6-2Q3LI66 62 aa5.44□□□□□ -1.54
DDX54-208ENST00000551344 KRTAP5-8O75690 187 aa5.29□□□□□ -1.56
DDX54-208ENST00000551344 MT3P25713 68 aa5.29□□□□□ -1.56
DDX54-208ENST00000551344 PMAIP1Q13794 54 aa5.22□□□□□ -1.57
DDX54-208ENST00000551344 OBSCNQ5VST9 7968 aa5.2□□□□□ -1.58
DDX54-208ENST00000551344 KRTAP9-9Q9BYP9 154 aa5.02□□□□□ -1.61
DDX54-208ENST00000551344 KRTAP5-1Q6L8H4 278 aa5.01□□□□□ -1.61
DDX54-208ENST00000551344 PRAC1Q96KF2 57 aa4.97□□□□□ -1.61
DDX54-208ENST00000551344 MUC5BQ9HC84 5762 aaPredicted RBP4.9□□□□□ -1.62
DDX54-208ENST00000551344 MUC5ACP98088 5654 aa4.89□□□□□ -1.63
DDX54-208ENST00000551344 LCE1EQ5T753 118 aa4.86□□□□□ -1.63
DDX54-208ENST00000551344 AHNAKQ09666 5890 aaKnown RBP4.84□□□□□ -1.63
DDX54-208ENST00000551344 PRO0628Q9UI54 55 aa4.82□□□□□ -1.64
DDX54-208ENST00000551344 KTN1-AS1Q86SY8 53 aa4.61□□□□□ -1.67
DDX54-208ENST00000551344 KRTAP4-2Q9BYR5 136 aa4.54□□□□□ -1.68
DDX54-208ENST00000551344 LCE1BQ5T7P3 118 aa4.52□□□□□ -1.69
DDX54-208ENST00000551344 LCE1CQ5T751 118 aa4.5□□□□□ -1.69
DDX54-208ENST00000551344 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
DDX54-208ENST00000551344 SVIPQ8NHG7 77 aa4.4□□□□□ -1.71
DDX54-208ENST00000551344 LUZP6Q538Z0 58 aa4.27□□□□□ -1.73
DDX54-208ENST00000551344 LCE3EQ5T5B0 92 aa4.16□□□□□ -1.74
DDX54-208ENST00000551344 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.1□□□□□ -1.75
DDX54-208ENST00000551344 KRTAP4-12Q9BQ66 201 aa4.07□□□□□ -1.76
DDX54-208ENST00000551344 KRTAP5-11Q6L8G4 156 aa4.05□□□□□ -1.76
DDX54-208ENST00000551344 LCE1FQ5T754 118 aa3.96□□□□□ -1.78
DDX54-208ENST00000551344 KRTAP21-2Q3LI59 83 aa3.77□□□□□ -1.81
DDX54-208ENST00000551344 PHGR1C9JFL3 82 aa3.5□□□□□ -1.85
DDX54-208ENST00000551344 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
DDX54-208ENST00000551344 NDUFAF8A1L188 74 aa3.37□□□□□ -1.87
DDX54-208ENST00000551344 MUC19Q7Z5P9 8384 aa3.22□□□□□ -1.89
DDX54-208ENST00000551344 PRM1P04553 51 aa3.13□□□□□ -1.91
DDX54-208ENST00000551344 INE1O15225 51 aa2.74□□□□□ -1.97
DDX54-208ENST00000551344 A0A0A0MQY5 61 aa2.67□□□□□ -1.98
DDX54-208ENST00000551344 KRTAP21-1Q3LI58 79 aa2.65□□□□□ -1.99
DDX54-208ENST00000551344 MUC16Q8WXI7 14507 aa2.3□□□□□ -2.04
DDX54-208ENST00000551344 H3BS24 57 aa1.79□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 71.7 ms