RNA–Protein interactions for RNA: ENST00000551245.5

TROAP-215, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 2,771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-215ENST00000551245 MACF1Q9UPN3 7388 aaKnown RBP4.09□□□□□ -1.76
TROAP-215ENST00000551245 SPRR2FQ96RM1 72 aa4.04□□□□□ -1.76
TROAP-215ENST00000551245 KRTAP5-9P26371 169 aa4.04□□□□□ -1.76
TROAP-215ENST00000551245 KRTAP19-3Q7Z4W3 81 aa4.03□□□□□ -1.76
TROAP-215ENST00000551245 MT1GP13640 62 aa4.01□□□□□ -1.77
TROAP-215ENST00000551245 KRTAP4-7Q9BYR0 210 aa3.97□□□□□ -1.77
TROAP-215ENST00000551245 MUC12Q9UKN1 5478 aa3.97□□□□□ -1.77
TROAP-215ENST00000551245 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.97□□□□□ -1.77
TROAP-215ENST00000551245 LCE5AQ5TCM9 118 aa3.97□□□□□ -1.77
TROAP-215ENST00000551245 KRTAP9-6A8MVA2 160 aa3.96□□□□□ -1.78
TROAP-215ENST00000551245 MT1MQ8N339 61 aa3.96□□□□□ -1.78
TROAP-215ENST00000551245 SYNE2Q8WXH0 6885 aaKnown RBP3.95□□□□□ -1.78
TROAP-215ENST00000551245 KRTAP6-3Q3LI67 103 aa3.93□□□□□ -1.78
TROAP-215ENST00000551245 LCE1AQ5T7P2 110 aa3.89□□□□□ -1.79
TROAP-215ENST00000551245 KRTAP2-3P0C7H8 128 aa3.87□□□□□ -1.79
TROAP-215ENST00000551245 KRTAP2-4Q9BYR9 128 aa3.87□□□□□ -1.79
TROAP-215ENST00000551245 KRTAP2-1Q9BYU5 128 aa3.87□□□□□ -1.79
TROAP-215ENST00000551245 KRTAP4-3Q9BYR4 195 aa3.85□□□□□ -1.79
TROAP-215ENST00000551245 SPRR2EP22531 72 aa3.83□□□□□ -1.8
TROAP-215ENST00000551245 SPRR2BP35325 72 aa3.83□□□□□ -1.8
TROAP-215ENST00000551245 SPRR2AP35326 72 aa3.83□□□□□ -1.8
TROAP-215ENST00000551245 MDN1Q9NU22 5596 aa3.81□□□□□ -1.8
TROAP-215ENST00000551245 LOC100996750A0A140TA64 210 aa3.73□□□□□ -1.81
TROAP-215ENST00000551245 KRTAP9-7A8MTY7 169 aa3.72□□□□□ -1.81
TROAP-215ENST00000551245 SPRR2DP22532 72 aa3.69□□□□□ -1.82
TROAP-215ENST00000551245 NEBP20929 6669 aa3.64□□□□□ -1.83
TROAP-215ENST00000551245 DSTQ03001 7570 aaKnown RBP3.59□□□□□ -1.83
TROAP-215ENST00000551245 KRTAP5-5Q701N2 237 aaPredicted RBP3.59□□□□□ -1.83
TROAP-215ENST00000551245 LCE3BQ5TA77 95 aa3.54□□□□□ -1.84
TROAP-215ENST00000551245 MT1AP04731 61 aa3.52□□□□□ -1.85
TROAP-215ENST00000551245 KRTAP12-4P60329 112 aa3.5□□□□□ -1.85
TROAP-215ENST00000551245 KRTAP6-1Q3LI64 71 aa3.47□□□□□ -1.85
TROAP-215ENST00000551245 KRTAP5-4Q6L8H1 288 aa3.4□□□□□ -1.87
TROAP-215ENST00000551245 KRTAP9-4Q9BYQ2 154 aa3.34□□□□□ -1.87
TROAP-215ENST00000551245 KRTAP2-2Q9BYT5 123 aa3.34□□□□□ -1.87
TROAP-215ENST00000551245 LCE4AQ5TA78 99 aa3.31□□□□□ -1.88
TROAP-215ENST00000551245 KRTAP20-1Q3LI63 56 aa3.31□□□□□ -1.88
TROAP-215ENST00000551245 KRTAP4-9Q9BYQ8 210 aa3.3□□□□□ -1.88
TROAP-215ENST00000551245 SYNE1Q8NF91 8797 aaKnown RBP3.29□□□□□ -1.88
TROAP-215ENST00000551245 LCE3DQ9BYE3 92 aa3.18□□□□□ -1.9
TROAP-215ENST00000551245 KRTAP4-6Q9BYQ5 205 aa3.18□□□□□ -1.9
TROAP-215ENST00000551245 MT3P25713 68 aa3.18□□□□□ -1.9
TROAP-215ENST00000551245 KRTAP6-2Q3LI66 62 aa3.18□□□□□ -1.9
TROAP-215ENST00000551245 MT4P47944 62 aa3.17□□□□□ -1.9
TROAP-215ENST00000551245 LCE3EQ5T5B0 92 aa3.16□□□□□ -1.9
TROAP-215ENST00000551245 KRTAP20-2Q3LI61 65 aa3.15□□□□□ -1.91
TROAP-215ENST00000551245 LCE1DQ5T752 114 aa3.14□□□□□ -1.91
TROAP-215ENST00000551245 PRM1P04553 51 aa3.11□□□□□ -1.91
TROAP-215ENST00000551245 KRTAP5-2Q701N4 177 aa3.1□□□□□ -1.91
TROAP-215ENST00000551245 HMCN1Q96RW7 5635 aa3.1□□□□□ -1.91
TROAP-215ENST00000551245 KRTAP5-3Q6L8H2 238 aa3.05□□□□□ -1.92
TROAP-215ENST00000551245 GPR98Q8WXG9 6306 aa2.99□□□□□ -1.93
TROAP-215ENST00000551245 OBSCNQ5VST9 7968 aa2.86□□□□□ -1.95
TROAP-215ENST00000551245 LCE1EQ5T753 118 aa2.78□□□□□ -1.97
TROAP-215ENST00000551245 AHNAK2Q8IVF2 5795 aa2.74□□□□□ -1.97
TROAP-215ENST00000551245 KRTAP9-9Q9BYP9 154 aa2.71□□□□□ -1.98
TROAP-215ENST00000551245 KRTAP4-11Q9BYQ6 195 aa2.71□□□□□ -1.98
TROAP-215ENST00000551245 KRTAP5-1Q6L8H4 278 aa2.66□□□□□ -1.98
TROAP-215ENST00000551245 KRTAP5-8O75690 187 aa2.62□□□□□ -1.99
TROAP-215ENST00000551245 KRTAP5-10Q6L8G5 202 aa2.62□□□□□ -1.99
TROAP-215ENST00000551245 KRTAP5-7Q6L8G8 165 aa2.59□□□□□ -2
TROAP-215ENST00000551245 LCE1CQ5T751 118 aa2.58□□□□□ -2
TROAP-215ENST00000551245 LCE1BQ5T7P3 118 aa2.58□□□□□ -2
TROAP-215ENST00000551245 KRTAP4-2Q9BYR5 136 aa2.57□□□□□ -2
TROAP-215ENST00000551245 MUC5ACP98088 5654 aa2.57□□□□□ -2
TROAP-215ENST00000551245 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
TROAP-215ENST00000551245 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.44□□□□□ -2.02
TROAP-215ENST00000551245 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
TROAP-215ENST00000551245 KRTAP4-12Q9BQ66 201 aa2.3□□□□□ -2.04
TROAP-215ENST00000551245 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
TROAP-215ENST00000551245 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
TROAP-215ENST00000551245 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
TROAP-215ENST00000551245 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
TROAP-215ENST00000551245 KRTAP4-4Q9BYR3 166 aa1.98□□□□□ -2.09
TROAP-215ENST00000551245 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
TROAP-215ENST00000551245 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
TROAP-215ENST00000551245 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 62 ms