RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 SPRR2FQ96RM1 72 aa5.35□□□□□ -1.55
SCN8A-206ENST00000550891 KRTAP19-3Q7Z4W3 81 aa5.3□□□□□ -1.56
SCN8A-206ENST00000550891 MT1GP13640 62 aa5.28□□□□□ -1.56
SCN8A-206ENST00000550891 MACF1Q9UPN3 7388 aaKnown RBP5.27□□□□□ -1.57
SCN8A-206ENST00000550891 KRTAP9-6A8MVA2 160 aa5.22□□□□□ -1.57
SCN8A-206ENST00000550891 MUC12Q9UKN1 5478 aa5.21□□□□□ -1.58
SCN8A-206ENST00000550891 MT1MQ8N339 61 aa5.21□□□□□ -1.58
SCN8A-206ENST00000550891 KRTAP4-3Q9BYR4 195 aa5.14□□□□□ -1.59
SCN8A-206ENST00000550891 LCE5AQ5TCM9 118 aa5.13□□□□□ -1.59
SCN8A-206ENST00000550891 SYNE2Q8WXH0 6885 aaKnown RBP5.08□□□□□ -1.6
SCN8A-206ENST00000550891 KRTAP5-9P26371 169 aa5.06□□□□□ -1.6
SCN8A-206ENST00000550891 LOC100996750A0A140TA64 210 aa5.02□□□□□ -1.61
SCN8A-206ENST00000550891 SPRR2EP22531 72 aa5□□□□□ -1.61
SCN8A-206ENST00000550891 SPRR2BP35325 72 aa5□□□□□ -1.61
SCN8A-206ENST00000550891 SPRR2AP35326 72 aa5□□□□□ -1.61
SCN8A-206ENST00000550891 KRTAP9-6A0A140TA67 174 aa4.99□□□□□ -1.61
SCN8A-206ENST00000550891 LCE1AQ5T7P2 110 aa4.99□□□□□ -1.61
SCN8A-206ENST00000550891 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.95□□□□□ -1.62
SCN8A-206ENST00000550891 DSTQ03001 7570 aaKnown RBP4.94□□□□□ -1.62
SCN8A-206ENST00000550891 KRTAP2-3P0C7H8 128 aa4.93□□□□□ -1.62
SCN8A-206ENST00000550891 KRTAP2-4Q9BYR9 128 aa4.93□□□□□ -1.62
SCN8A-206ENST00000550891 KRTAP2-1Q9BYU5 128 aa4.93□□□□□ -1.62
SCN8A-206ENST00000550891 KRTAP6-3Q3LI67 103 aa4.9□□□□□ -1.63
SCN8A-206ENST00000550891 MDN1Q9NU22 5596 aa4.88□□□□□ -1.63
SCN8A-206ENST00000550891 INE1O15225 51 aa4.86□□□□□ -1.63
SCN8A-206ENST00000550891 SPRR2DP22532 72 aa4.81□□□□□ -1.64
SCN8A-206ENST00000550891 MT1AP04731 61 aa4.64□□□□□ -1.67
SCN8A-206ENST00000550891 KRTAP9-7A8MTY7 169 aa4.62□□□□□ -1.67
SCN8A-206ENST00000550891 LCE3BQ5TA77 95 aa4.62□□□□□ -1.67
SCN8A-206ENST00000550891 KRTAP6-1Q3LI64 71 aa4.61□□□□□ -1.67
SCN8A-206ENST00000550891 KRTAP5-5Q701N2 237 aaPredicted RBP4.59□□□□□ -1.68
SCN8A-206ENST00000550891 SYNE1Q8NF91 8797 aaKnown RBP4.47□□□□□ -1.69
SCN8A-206ENST00000550891 NEBP20929 6669 aa4.45□□□□□ -1.7
SCN8A-206ENST00000550891 KRTAP9-4Q9BYQ2 154 aa4.39□□□□□ -1.71
SCN8A-206ENST00000550891 KRTAP4-9Q9BYQ8 210 aa4.36□□□□□ -1.71
SCN8A-206ENST00000550891 KRTAP12-4P60329 112 aa4.36□□□□□ -1.71
SCN8A-206ENST00000550891 LCE3DQ9BYE3 92 aa4.27□□□□□ -1.73
SCN8A-206ENST00000550891 KRTAP5-4Q6L8H1 288 aa4.26□□□□□ -1.73
SCN8A-206ENST00000550891 MT3P25713 68 aa4.24□□□□□ -1.73
SCN8A-206ENST00000550891 KRTAP6-2Q3LI66 62 aa4.23□□□□□ -1.73
SCN8A-206ENST00000550891 LCE4AQ5TA78 99 aa4.2□□□□□ -1.74
SCN8A-206ENST00000550891 MT4P47944 62 aa4.2□□□□□ -1.74
SCN8A-206ENST00000550891 KRTAP2-2Q9BYT5 123 aa4.2□□□□□ -1.74
SCN8A-206ENST00000550891 LCE3EQ5T5B0 92 aa4.18□□□□□ -1.74
SCN8A-206ENST00000550891 KRTAP9-9Q9BYP9 154 aa4.17□□□□□ -1.74
SCN8A-206ENST00000550891 KRTAP20-1Q3LI63 56 aa4.13□□□□□ -1.75
SCN8A-206ENST00000550891 KRTAP4-6Q9BYQ5 205 aa4.12□□□□□ -1.75
SCN8A-206ENST00000550891 KRTAP20-2Q3LI61 65 aa4.04□□□□□ -1.76
SCN8A-206ENST00000550891 OBSCNQ5VST9 7968 aa4.02□□□□□ -1.77
SCN8A-206ENST00000550891 LCE1DQ5T752 114 aa4.01□□□□□ -1.77
SCN8A-206ENST00000550891 HMCN1Q96RW7 5635 aa3.91□□□□□ -1.78
SCN8A-206ENST00000550891 KRTAP5-2Q701N4 177 aa3.9□□□□□ -1.78
SCN8A-206ENST00000550891 KRTAP4-12Q9BQ66 201 aa3.85□□□□□ -1.79
SCN8A-206ENST00000550891 KRTAP5-3Q6L8H2 238 aa3.82□□□□□ -1.8
SCN8A-206ENST00000550891 PRM1P04553 51 aa3.77□□□□□ -1.81
SCN8A-206ENST00000550891 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
SCN8A-206ENST00000550891 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
SCN8A-206ENST00000550891 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
SCN8A-206ENST00000550891 KRTAP4-11Q9BYQ6 195 aa3.46□□□□□ -1.86
SCN8A-206ENST00000550891 KRTAP5-1Q6L8H4 278 aa3.36□□□□□ -1.87
SCN8A-206ENST00000550891 MUC5ACP98088 5654 aa3.35□□□□□ -1.87
SCN8A-206ENST00000550891 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
SCN8A-206ENST00000550891 KRTAP5-10Q6L8G5 202 aa3.31□□□□□ -1.88
SCN8A-206ENST00000550891 KRTAP4-2Q9BYR5 136 aa3.29□□□□□ -1.88
SCN8A-206ENST00000550891 AHNAK2Q8IVF2 5795 aa3.28□□□□□ -1.88
SCN8A-206ENST00000550891 KRTAP5-8O75690 187 aa3.27□□□□□ -1.89
SCN8A-206ENST00000550891 KRTAP5-7Q6L8G8 165 aa3.17□□□□□ -1.9
SCN8A-206ENST00000550891 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.08□□□□□ -1.92
SCN8A-206ENST00000550891 KRTAP21-2Q3LI59 83 aa2.97□□□□□ -1.93
SCN8A-206ENST00000550891 GPR98Q8WXG9 6306 aa2.92□□□□□ -1.94
SCN8A-206ENST00000550891 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.95
SCN8A-206ENST00000550891 MUC5BQ9HC84 5762 aaPredicted RBP2.81□□□□□ -1.96
SCN8A-206ENST00000550891 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
SCN8A-206ENST00000550891 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
SCN8A-206ENST00000550891 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
SCN8A-206ENST00000550891 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
SCN8A-206ENST00000550891 KRTAP21-1Q3LI58 79 aa2.3□□□□□ -2.04
SCN8A-206ENST00000550891 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 70.3 ms