RNA–Protein interactions for RNA: ENST00000550808.5

MTA1-218, Transcript of metastasis associated 1, humanhuman

TSL 5

Gene MTA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-218ENST00000550808 KRTAP5-4Q6L8H1 288 aa7.94□□□□□ -1.14
MTA1-218ENST00000550808 PRR15LQ9BU68 103 aa7.91□□□□□ -1.14
MTA1-218ENST00000550808 KRTAP4-6Q9BYQ5 205 aa7.88□□□□□ -1.15
MTA1-218ENST00000550808 AHNAK2Q8IVF2 5795 aa7.85□□□□□ -1.15
MTA1-218ENST00000550808 CCDC179H3BU77 68 aa7.85□□□□□ -1.15
MTA1-218ENST00000550808 KRTAP4-7Q9BYR0 210 aa7.85□□□□□ -1.15
MTA1-218ENST00000550808 KRTAP12-3P60328 96 aa7.82□□□□□ -1.16
MTA1-218ENST00000550808 LINC01558Q9Y6Z2 57 aa7.78□□□□□ -1.16
MTA1-218ENST00000550808 ATP5EP56381 51 aaPredicted RBP7.77□□□□□ -1.17
MTA1-218ENST00000550808 KRTAP5-10Q6L8G5 202 aa7.73□□□□□ -1.17
MTA1-218ENST00000550808 UQCR11O14957 56 aa7.64□□□□□ -1.19
MTA1-218ENST00000550808 KRTAP20-2Q3LI61 65 aa7.54□□□□□ -1.2
MTA1-218ENST00000550808 KRTAP5-5Q701N2 237 aaPredicted RBP7.54□□□□□ -1.2
MTA1-218ENST00000550808 KRTAP25-1Q3LHN0 102 aa7.51□□□□□ -1.21
MTA1-218ENST00000550808 KRTAP5-3Q6L8H2 238 aa7.51□□□□□ -1.21
MTA1-218ENST00000550808 TMEM258P61165 79 aa7.49□□□□□ -1.21
MTA1-218ENST00000550808 MIR22HGQ0VDD5 57 aa7.47□□□□□ -1.21
MTA1-218ENST00000550808 LOC100996750A0A140TA64 210 aa7.45□□□□□ -1.22
MTA1-218ENST00000550808 SPRR5A0A1B0GTR4 108 aa7.45□□□□□ -1.22
MTA1-218ENST00000550808 KRTAP5-7Q6L8G8 165 aa7.45□□□□□ -1.22
MTA1-218ENST00000550808 KRTAP12-4P60329 112 aa7.42□□□□□ -1.22
MTA1-218ENST00000550808 K7ERS5 55 aa7.36□□□□□ -1.23
MTA1-218ENST00000550808 SYNE1Q8NF91 8797 aaKnown RBP7.28□□□□□ -1.24
MTA1-218ENST00000550808 KRTAP19-4Q3LI73 84 aa7.27□□□□□ -1.25
MTA1-218ENST00000550808 PSPHP1O15172 72 aa7.23□□□□□ -1.25
MTA1-218ENST00000550808 KRTAP15-1Q3LI76 137 aa7.23□□□□□ -1.25
MTA1-218ENST00000550808 LCE3CQ5T5A8 94 aa7.18□□□□□ -1.26
MTA1-218ENST00000550808 KRTAP23-1A1A580 65 aa7.17□□□□□ -1.26
MTA1-218ENST00000550808 V9GYY9 64 aa7.13□□□□□ -1.27
MTA1-218ENST00000550808 Q1T7F1 81 aa7.08□□□□□ -1.28
MTA1-218ENST00000550808 MT1AP04731 61 aa6.98□□□□□ -1.29
MTA1-218ENST00000550808 KRTAP6-1Q3LI64 71 aa6.97□□□□□ -1.29
MTA1-218ENST00000550808 A6NED7 52 aa6.96□□□□□ -1.3
MTA1-218ENST00000550808 CDC42SE1Q9NRR8 79 aa6.94□□□□□ -1.3
MTA1-218ENST00000550808 KRTAP4-11Q9BYQ6 195 aa6.93□□□□□ -1.3
MTA1-218ENST00000550808 KRTAP5-2Q701N4 177 aa6.92□□□□□ -1.3
MTA1-218ENST00000550808 ROMO1P60602 79 aa6.82□□□□□ -1.32
MTA1-218ENST00000550808 RPS28P62857 69 aaKnown RBP6.82□□□□□ -1.32
MTA1-218ENST00000550808 KRTAP9-6A8MVA2 160 aa6.8□□□□□ -1.32
MTA1-218ENST00000550808 KRTAP9-4Q9BYQ2 154 aa6.77□□□□□ -1.33
MTA1-218ENST00000550808 KRTAP6-2Q3LI66 62 aa6.71□□□□□ -1.34
MTA1-218ENST00000550808 KRTAP5-8O75690 187 aa6.7□□□□□ -1.34
MTA1-218ENST00000550808 OBSCNQ5VST9 7968 aa6.52□□□□□ -1.37
MTA1-218ENST00000550808 AHNAKQ09666 5890 aaKnown RBP6.5□□□□□ -1.37
MTA1-218ENST00000550808 MUC5ACP98088 5654 aa6.49□□□□□ -1.37
MTA1-218ENST00000550808 MUC5BQ9HC84 5762 aaPredicted RBP6.45□□□□□ -1.38
MTA1-218ENST00000550808 KRTAP9-9Q9BYP9 154 aa6.4□□□□□ -1.38
MTA1-218ENST00000550808 MT3P25713 68 aa6.39□□□□□ -1.39
MTA1-218ENST00000550808 KRTAP5-1Q6L8H4 278 aa6.25□□□□□ -1.41
MTA1-218ENST00000550808 PCP4P48539 62 aa6.11□□□□□ -1.43
MTA1-218ENST00000550808 LCE1EQ5T753 118 aa5.89□□□□□ -1.47
MTA1-218ENST00000550808 BRK1Q8WUW1 75 aa5.67□□□□□ -1.5
MTA1-218ENST00000550808 LCE1BQ5T7P3 118 aa5.65□□□□□ -1.5
MTA1-218ENST00000550808 KRTAP4-2Q9BYR5 136 aa5.62□□□□□ -1.51
MTA1-218ENST00000550808 LCE1CQ5T751 118 aa5.47□□□□□ -1.53
MTA1-218ENST00000550808 PMAIP1Q13794 54 aa5.3□□□□□ -1.56
MTA1-218ENST00000550808 KRTAP4-12Q9BQ66 201 aa5.24□□□□□ -1.57
MTA1-218ENST00000550808 PRAC1Q96KF2 57 aa5.23□□□□□ -1.57
MTA1-218ENST00000550808 SVIPQ8NHG7 77 aa5.18□□□□□ -1.58
MTA1-218ENST00000550808 LCE3DQ9BYE3 92 aa5.13□□□□□ -1.59
MTA1-218ENST00000550808 KRTAP5-11Q6L8G4 156 aa4.97□□□□□ -1.61
MTA1-218ENST00000550808 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.93□□□□□ -1.62
MTA1-218ENST00000550808 LCE1FQ5T754 118 aa4.87□□□□□ -1.63
MTA1-218ENST00000550808 LCE3EQ5T5B0 92 aa4.79□□□□□ -1.64
MTA1-218ENST00000550808 H3BS24 57 aa4.64□□□□□ -1.67
MTA1-218ENST00000550808 KRTAP21-2Q3LI59 83 aa4.58□□□□□ -1.68
MTA1-218ENST00000550808 PRO0628Q9UI54 55 aa4.58□□□□□ -1.68
MTA1-218ENST00000550808 PHGR1C9JFL3 82 aa4.54□□□□□ -1.68
MTA1-218ENST00000550808 KTN1-AS1Q86SY8 53 aa4.48□□□□□ -1.69
MTA1-218ENST00000550808 LUZP6Q538Z0 58 aa4.42□□□□□ -1.7
MTA1-218ENST00000550808 KRTAP4-4Q9BYR3 166 aa4.29□□□□□ -1.72
MTA1-218ENST00000550808 MUC19Q7Z5P9 8384 aa4.05□□□□□ -1.76
MTA1-218ENST00000550808 A0A0A0MQY5 61 aa3.95□□□□□ -1.78
MTA1-218ENST00000550808 PRM1P04553 51 aa3.49□□□□□ -1.85
MTA1-218ENST00000550808 KRTAP21-1Q3LI58 79 aa3.42□□□□□ -1.86
MTA1-218ENST00000550808 NDUFAF8A1L188 74 aa3.23□□□□□ -1.89
MTA1-218ENST00000550808 MUC16Q8WXI7 14507 aa2.85□□□□□ -1.95
MTA1-218ENST00000550808 INE1O15225 51 aa2.45□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 82 ms