RNA–Protein interactions for RNA: ENST00000550705.1

CNOT2-226, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 522 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-226ENST00000550705 PKD1P98161 4303 aa0.95□□□□□ -2.26
CNOT2-226ENST00000550705 MYO15AQ9UKN7 3530 aa0.95□□□□□ -2.26
CNOT2-226ENST00000550705 DNAH14Q0VDD8 3507 aa0.94□□□□□ -2.26
CNOT2-226ENST00000550705 WDFY3Q8IZQ1 3526 aa0.94□□□□□ -2.26
CNOT2-226ENST00000550705 FAT2Q9NYQ8 4349 aa0.93□□□□□ -2.26
CNOT2-226ENST00000550705 KRTAP6-2Q3LI66 62 aa0.93□□□□□ -2.26
CNOT2-226ENST00000550705 DNAH17Q9UFH2 4485 aa0.93□□□□□ -2.26
CNOT2-226ENST00000550705 VPS13CQ709C8 3753 aa0.93□□□□□ -2.26
CNOT2-226ENST00000550705 HECTD4Q9Y4D8 3996 aa0.93□□□□□ -2.26
CNOT2-226ENST00000550705 FAT3Q8TDW7 4589 aa0.92□□□□□ -2.26
CNOT2-226ENST00000550705 APOBP04114 4563 aaKnown RBP0.91□□□□□ -2.26
CNOT2-226ENST00000550705 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
CNOT2-226ENST00000550705 KRTAP5-10Q6L8G5 202 aa0.91□□□□□ -2.26
CNOT2-226ENST00000550705 MT1LQ93083 61 aa0.91□□□□□ -2.26
CNOT2-226ENST00000550705 LPAP08519 4548 aa0.9□□□□□ -2.26
CNOT2-226ENST00000550705 SPRR2EP22531 72 aa0.9□□□□□ -2.27
CNOT2-226ENST00000550705 CDH23Q9H251 3354 aa0.88□□□□□ -2.27
CNOT2-226ENST00000550705 MT1HP80294 61 aa0.87□□□□□ -2.27
CNOT2-226ENST00000550705 LRP1Q07954 4544 aaKnown RBP0.86□□□□□ -2.27
CNOT2-226ENST00000550705 KRTAP19-8Q3LI54 63 aa0.86□□□□□ -2.27
CNOT2-226ENST00000550705 PLECQ15149 4684 aaKnown RBP0.85□□□□□ -2.27
CNOT2-226ENST00000550705 KRTAP21-1Q3LI58 79 aa0.84□□□□□ -2.27
CNOT2-226ENST00000550705 PKHD1P08F94 4074 aa0.84□□□□□ -2.28
CNOT2-226ENST00000550705 MT1XP80297 61 aa0.83□□□□□ -2.28
CNOT2-226ENST00000550705 DYNC1H1Q14204 4646 aaKnown RBP0.83□□□□□ -2.28
CNOT2-226ENST00000550705 SYNE1Q8NF91 8797 aaKnown RBP0.81□□□□□ -2.28
CNOT2-226ENST00000550705 DNAH5Q8TE73 4624 aa0.79□□□□□ -2.28
CNOT2-226ENST00000550705 MUC17Q685J3 4493 aa0.78□□□□□ -2.28
CNOT2-226ENST00000550705 STARD9Q9P2P6 4700 aa0.77□□□□□ -2.29
CNOT2-226ENST00000550705 KRTAP19-2Q3LHN2 52 aa0.75□□□□□ -2.29
CNOT2-226ENST00000550705 FAT1Q14517 4588 aa0.74□□□□□ -2.29
CNOT2-226ENST00000550705 KRTAP19-7Q3SYF9 63 aa0.72□□□□□ -2.29
CNOT2-226ENST00000550705 MT1BP07438 61 aa0.7□□□□□ -2.3
CNOT2-226ENST00000550705 MT2AP02795 61 aa0.69□□□□□ -2.3
CNOT2-226ENST00000550705 MT1GP13640 62 aa0.69□□□□□ -2.3
CNOT2-226ENST00000550705 MT1MQ8N339 61 aa0.68□□□□□ -2.3
CNOT2-226ENST00000550705 LRP1BQ9NZR2 4599 aa0.67□□□□□ -2.3
CNOT2-226ENST00000550705 LRP2P98164 4655 aa0.62□□□□□ -2.31
CNOT2-226ENST00000550705 HERC1Q15751 4861 aa0.62□□□□□ -2.31
CNOT2-226ENST00000550705 MT1HL1P0DM35 61 aa0.62□□□□□ -2.31
CNOT2-226ENST00000550705 MT1FP04733 61 aa0.6□□□□□ -2.31
CNOT2-226ENST00000550705 KRTAP6-1Q3LI64 71 aa0.6□□□□□ -2.31
CNOT2-226ENST00000550705 HMCN2Q8NDA2 5059 aa0.53□□□□□ -2.32
CNOT2-226ENST00000550705 MUC2Q02817 5179 aa0.52□□□□□ -2.33
CNOT2-226ENST00000550705 KMT2CQ8NEZ4 4911 aaKnown RBP0.47□□□□□ -2.33
CNOT2-226ENST00000550705 MDN1Q9NU22 5596 aa0.47□□□□□ -2.33
CNOT2-226ENST00000550705 MUC5BQ9HC84 5762 aaPredicted RBP0.47□□□□□ -2.33
CNOT2-226ENST00000550705 DNHD1Q96M86 4753 aa0.46□□□□□ -2.34
CNOT2-226ENST00000550705 SSPOA2VEC9 5147 aa0.46□□□□□ -2.34
CNOT2-226ENST00000550705 HERC2O95714 4834 aa0.44□□□□□ -2.34
CNOT2-226ENST00000550705 USH2AO75445 5202 aa0.44□□□□□ -2.34
CNOT2-226ENST00000550705 HYDINQ4G0P3 5121 aa0.42□□□□□ -2.34
CNOT2-226ENST00000550705 MUC5ACP98088 5654 aa0.42□□□□□ -2.34
CNOT2-226ENST00000550705 PCLOQ9Y6V0 5065 aa0.41□□□□□ -2.34
CNOT2-226ENST00000550705 KMT2DO14686 5537 aa0.41□□□□□ -2.34
CNOT2-226ENST00000550705 FAT4Q6V0I7 4981 aa0.4□□□□□ -2.35
CNOT2-226ENST00000550705 GPR98Q8WXG9 6306 aa0.4□□□□□ -2.35
CNOT2-226ENST00000550705 BIRC6Q9NR09 4857 aa0.39□□□□□ -2.35
CNOT2-226ENST00000550705 AHNAKQ09666 5890 aaKnown RBP0.38□□□□□ -2.35
CNOT2-226ENST00000550705 RYR3Q15413 4870 aa0.38□□□□□ -2.35
CNOT2-226ENST00000550705 PHGR1C9JFL3 82 aa0.35□□□□□ -2.35
CNOT2-226ENST00000550705 RYR1P21817 5038 aa0.33□□□□□ -2.36
CNOT2-226ENST00000550705 RNF213Q63HN8 5207 aa0.33□□□□□ -2.36
CNOT2-226ENST00000550705 UBR4Q5T4S7 5183 aa0.32□□□□□ -2.36
CNOT2-226ENST00000550705 SYNE2Q8WXH0 6885 aaKnown RBP0.27□□□□□ -2.37
CNOT2-226ENST00000550705 MACF1Q9UPN3 7388 aaKnown RBP0.26□□□□□ -2.37
CNOT2-226ENST00000550705 MT4P47944 62 aa0.26□□□□□ -2.37
CNOT2-226ENST00000550705 KRTAP19-6Q3LI70 58 aa0.26□□□□□ -2.37
CNOT2-226ENST00000550705 FSIP2Q5CZC0 6907 aa0.24□□□□□ -2.37
CNOT2-226ENST00000550705 MUC12Q9UKN1 5478 aa0.22□□□□□ -2.37
CNOT2-226ENST00000550705 KIAA1109Q2LD37 5005 aa0.2□□□□□ -2.38
CNOT2-226ENST00000550705 EPPK1P58107 5090 aaKnown RBP0.2□□□□□ -2.38
CNOT2-226ENST00000550705 RYR2Q92736 4967 aa0.19□□□□□ -2.38
CNOT2-226ENST00000550705 DSTQ03001 7570 aaKnown RBP0.18□□□□□ -2.38
CNOT2-226ENST00000550705 KRTAP20-2Q3LI61 65 aa0.18□□□□□ -2.38
CNOT2-226ENST00000550705 ABCA13Q86UQ4 5058 aa0.18□□□□□ -2.38
CNOT2-226ENST00000550705 KRTAP20-1Q3LI63 56 aa0.07□□□□□ -2.4
CNOT2-226ENST00000550705 NEBP20929 6669 aa-0.07□□□□□ -2.42
Retrieved 78 of 20,778 RNA–protein pairs in 38.3 ms