RNA–Protein interactions for RNA: ENST00000550661.1

PTPRR-210, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 3

Gene PTPRR, Length 1,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-210ENST00000550661 FCGBPQ9Y6R7 5405 aaPredicted RBP2.57□□□□□ -2
PTPRR-210ENST00000550661 A6NN06 94 aa2.56□□□□□ -2
PTPRR-210ENST00000550661 KRTAP13-4Q3LI77 160 aa2.56□□□□□ -2
PTPRR-210ENST00000550661 LINC01554Q52M75 96 aa2.56□□□□□ -2
PTPRR-210ENST00000550661 PMAIP1Q13794 54 aa2.55□□□□□ -2
PTPRR-210ENST00000550661 SPATA8Q6RVD6 105 aa2.55□□□□□ -2
PTPRR-210ENST00000550661 KRTAP5-2Q701N4 177 aa2.55□□□□□ -2
PTPRR-210ENST00000550661 PLAC4Q8WY50 150 aa2.54□□□□□ -2
PTPRR-210ENST00000550661 K7ERS5 55 aa2.52□□□□□ -2.01
PTPRR-210ENST00000550661 PRO2289Q9P1D8 64 aa2.51□□□□□ -2.01
PTPRR-210ENST00000550661 A0A0D9SG42 100 aa2.5□□□□□ -2.01
PTPRR-210ENST00000550661 KTN1-AS1Q86SY8 53 aa2.5□□□□□ -2.01
PTPRR-210ENST00000550661 KRTAP4-3Q9BYR4 195 aa2.5□□□□□ -2.01
PTPRR-210ENST00000550661 MT1XP80297 61 aa2.48□□□□□ -2.01
PTPRR-210ENST00000550661 MACF1Q9UPN3 7388 aaKnown RBP2.46□□□□□ -2.02
PTPRR-210ENST00000550661 KRTAP12-1P59990 96 aa2.46□□□□□ -2.02
PTPRR-210ENST00000550661 CAMK2N1Q7Z7J9 78 aa2.46□□□□□ -2.02
PTPRR-210ENST00000550661 SPINT4Q6UDR6 99 aa2.45□□□□□ -2.02
PTPRR-210ENST00000550661 LCE3AQ5TA76 89 aa2.44□□□□□ -2.02
PTPRR-210ENST00000550661 SYNE2Q8WXH0 6885 aaKnown RBP2.4□□□□□ -2.02
PTPRR-210ENST00000550661 KMT2DO14686 5537 aa2.38□□□□□ -2.03
PTPRR-210ENST00000550661 ROMO1P60602 79 aa2.35□□□□□ -2.03
PTPRR-210ENST00000550661 KRTAP6-3Q3LI67 103 aa2.33□□□□□ -2.04
PTPRR-210ENST00000550661 MUC12Q9UKN1 5478 aa2.32□□□□□ -2.04
PTPRR-210ENST00000550661 C10orf95Q9H7T3 257 aa2.32□□□□□ -2.04
PTPRR-210ENST00000550661 MDN1Q9NU22 5596 aa2.32□□□□□ -2.04
PTPRR-210ENST00000550661 TNP1P09430 55 aa2.31□□□□□ -2.04
PTPRR-210ENST00000550661 KRTAP8-1Q8IUC2 63 aa2.31□□□□□ -2.04
PTPRR-210ENST00000550661 KRTAP25-1Q3LHN0 102 aa2.29□□□□□ -2.04
PTPRR-210ENST00000550661 SPRR2FQ96RM1 72 aa2.26□□□□□ -2.05
PTPRR-210ENST00000550661 NEBP20929 6669 aa2.26□□□□□ -2.05
PTPRR-210ENST00000550661 GPR98Q8WXG9 6306 aa2.24□□□□□ -2.05
PTPRR-210ENST00000550661 KRTAP5-5Q701N2 237 aaPredicted RBP2.23□□□□□ -2.05
PTPRR-210ENST00000550661 KRTAP19-7Q3SYF9 63 aa2.21□□□□□ -2.06
PTPRR-210ENST00000550661 MT1EP04732 61 aa2.2□□□□□ -2.06
PTPRR-210ENST00000550661 SPRR2EP22531 72 aa2.19□□□□□ -2.06
PTPRR-210ENST00000550661 SPRR2BP35325 72 aa2.19□□□□□ -2.06
PTPRR-210ENST00000550661 SPRR2AP35326 72 aa2.19□□□□□ -2.06
PTPRR-210ENST00000550661 KRTAP19-5Q3LI72 72 aa2.19□□□□□ -2.06
PTPRR-210ENST00000550661 PP632Q6XCG6 107 aa2.19□□□□□ -2.06
PTPRR-210ENST00000550661 KRTAP5-8O75690 187 aa2.17□□□□□ -2.06
PTPRR-210ENST00000550661 KRTAP12-3P60328 96 aa2.15□□□□□ -2.07
PTPRR-210ENST00000550661 KRTAP19-3Q7Z4W3 81 aa2.15□□□□□ -2.07
PTPRR-210ENST00000550661 LCE3DQ9BYE3 92 aa2.13□□□□□ -2.07
PTPRR-210ENST00000550661 SPRR2DP22532 72 aa2.12□□□□□ -2.07
PTPRR-210ENST00000550661 MT1LQ93083 61 aa2.12□□□□□ -2.07
PTPRR-210ENST00000550661 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
PTPRR-210ENST00000550661 LCE1BQ5T7P3 118 aa2.11□□□□□ -2.07
PTPRR-210ENST00000550661 MT1GP13640 62 aa2.1□□□□□ -2.07
PTPRR-210ENST00000550661 KRTAP20-1Q3LI63 56 aa2.08□□□□□ -2.08
PTPRR-210ENST00000550661 MT1MQ8N339 61 aa2.07□□□□□ -2.08
PTPRR-210ENST00000550661 KRTAP2-3P0C7H8 128 aa2.06□□□□□ -2.08
PTPRR-210ENST00000550661 KRTAP2-4Q9BYR9 128 aa2.06□□□□□ -2.08
PTPRR-210ENST00000550661 DSTQ03001 7570 aaKnown RBP2.03□□□□□ -2.08
PTPRR-210ENST00000550661 KRTAP2-1Q9BYU5 128 aa2.01□□□□□ -2.09
PTPRR-210ENST00000550661 LUZP6Q538Z0 58 aa2□□□□□ -2.09
PTPRR-210ENST00000550661 SPRR5A0A1B0GTR4 108 aa1.91□□□□□ -2.1
PTPRR-210ENST00000550661 HMCN1Q96RW7 5635 aa1.89□□□□□ -2.11
PTPRR-210ENST00000550661 AHNAK2Q8IVF2 5795 aa1.88□□□□□ -2.11
PTPRR-210ENST00000550661 MT1AP04731 61 aa1.82□□□□□ -2.12
PTPRR-210ENST00000550661 MT4P47944 62 aa1.82□□□□□ -2.12
PTPRR-210ENST00000550661 KRTAP12-4P60329 112 aa1.8□□□□□ -2.12
PTPRR-210ENST00000550661 SYNE1Q8NF91 8797 aaKnown RBP1.8□□□□□ -2.12
PTPRR-210ENST00000550661 KRTAP20-2Q3LI61 65 aa1.77□□□□□ -2.13
PTPRR-210ENST00000550661 KRTAP6-1Q3LI64 71 aa1.77□□□□□ -2.13
PTPRR-210ENST00000550661 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
PTPRR-210ENST00000550661 KRTAP5-7Q6L8G8 165 aa1.74□□□□□ -2.13
PTPRR-210ENST00000550661 MUC5BQ9HC84 5762 aaPredicted RBP1.69□□□□□ -2.14
PTPRR-210ENST00000550661 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
PTPRR-210ENST00000550661 INE1O15225 51 aa1.67□□□□□ -2.14
PTPRR-210ENST00000550661 KRTAP6-2Q3LI66 62 aa1.66□□□□□ -2.14
PTPRR-210ENST00000550661 KRTAP5-10Q6L8G5 202 aa1.63□□□□□ -2.15
PTPRR-210ENST00000550661 MUC5ACP98088 5654 aa1.56□□□□□ -2.16
PTPRR-210ENST00000550661 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
PTPRR-210ENST00000550661 PRM1P04553 51 aa1.2□□□□□ -2.22
PTPRR-210ENST00000550661 PHGR1C9JFL3 82 aa1.06□□□□□ -2.24
PTPRR-210ENST00000550661 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.29
PTPRR-210ENST00000550661 KRTAP21-1Q3LI58 79 aa0.76□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 229.5 ms