RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 TNP1P09430 55 aa1.94□□□□□ -2.1
CCDC59-204ENST00000550589 FLGP20930 4061 aaPredicted RBP1.94□□□□□ -2.1
CCDC59-204ENST00000550589 MUC2Q02817 5179 aa1.93□□□□□ -2.1
CCDC59-204ENST00000550589 HMCN2Q8NDA2 5059 aa1.9□□□□□ -2.1
CCDC59-204ENST00000550589 SPRR2GQ9BYE4 73 aa1.9□□□□□ -2.1
CCDC59-204ENST00000550589 HERC1Q15751 4861 aa1.89□□□□□ -2.11
CCDC59-204ENST00000550589 LUZP6Q538Z0 58 aa1.88□□□□□ -2.11
CCDC59-204ENST00000550589 LCE3EQ5T5B0 92 aa1.88□□□□□ -2.11
CCDC59-204ENST00000550589 LCE3AQ5TA76 89 aa1.88□□□□□ -2.11
CCDC59-204ENST00000550589 PCLOQ9Y6V0 5065 aa1.87□□□□□ -2.11
CCDC59-204ENST00000550589 KRTAP10-10P60014 251 aa1.87□□□□□ -2.11
CCDC59-204ENST00000550589 MT1HP80294 61 aa1.87□□□□□ -2.11
CCDC59-204ENST00000550589 FAT4Q6V0I7 4981 aa1.85□□□□□ -2.11
CCDC59-204ENST00000550589 KRTAP5-5Q701N2 237 aaPredicted RBP1.84□□□□□ -2.12
CCDC59-204ENST00000550589 MT2AP02795 61 aa1.82□□□□□ -2.12
CCDC59-204ENST00000550589 PRO2289Q9P1D8 64 aa1.82□□□□□ -2.12
CCDC59-204ENST00000550589 MT1FP04733 61 aa1.81□□□□□ -2.12
CCDC59-204ENST00000550589 KRTAP19-8Q3LI54 63 aa1.81□□□□□ -2.12
CCDC59-204ENST00000550589 UBR4Q5T4S7 5183 aa1.77□□□□□ -2.13
CCDC59-204ENST00000550589 LCE1CQ5T751 118 aa1.77□□□□□ -2.13
CCDC59-204ENST00000550589 LCE1BQ5T7P3 118 aa1.77□□□□□ -2.13
CCDC59-204ENST00000550589 RNF213Q63HN8 5207 aa1.76□□□□□ -2.13
CCDC59-204ENST00000550589 GPR98Q8WXG9 6306 aa1.75□□□□□ -2.13
CCDC59-204ENST00000550589 KRTAP8-1Q8IUC2 63 aa1.75□□□□□ -2.13
CCDC59-204ENST00000550589 MT1BP07438 61 aa1.74□□□□□ -2.13
CCDC59-204ENST00000550589 SPRR5A0A1B0GTR4 108 aa1.73□□□□□ -2.13
CCDC59-204ENST00000550589 MT1XP80297 61 aa1.72□□□□□ -2.13
CCDC59-204ENST00000550589 KRTAP12-3P60328 96 aa1.71□□□□□ -2.14
CCDC59-204ENST00000550589 KRTAP19-5Q3LI72 72 aa1.6□□□□□ -2.15
CCDC59-204ENST00000550589 INE1O15225 51 aa1.59□□□□□ -2.15
CCDC59-204ENST00000550589 USH2AO75445 5202 aa1.57□□□□□ -2.16
CCDC59-204ENST00000550589 KRTAP19-6Q3LI70 58 aa1.55□□□□□ -2.16
CCDC59-204ENST00000550589 KRTAP19-7Q3SYF9 63 aa1.53□□□□□ -2.16
CCDC59-204ENST00000550589 LCE3DQ9BYE3 92 aa1.51□□□□□ -2.17
CCDC59-204ENST00000550589 KMT2DO14686 5537 aa1.51□□□□□ -2.17
CCDC59-204ENST00000550589 AHNAKQ09666 5890 aaKnown RBP1.51□□□□□ -2.17
CCDC59-204ENST00000550589 MT1EP04732 61 aa1.51□□□□□ -2.17
CCDC59-204ENST00000550589 MT1LQ93083 61 aa1.51□□□□□ -2.17
CCDC59-204ENST00000550589 MT1GP13640 62 aa1.48□□□□□ -2.17
CCDC59-204ENST00000550589 SSPOA2VEC9 5147 aa1.46□□□□□ -2.18
CCDC59-204ENST00000550589 KRTAP19-3Q7Z4W3 81 aa1.45□□□□□ -2.18
CCDC59-204ENST00000550589 MUC19Q7Z5P9 8384 aa1.45□□□□□ -2.18
CCDC59-204ENST00000550589 KRTAP2-3P0C7H8 128 aa1.45□□□□□ -2.18
CCDC59-204ENST00000550589 KRTAP2-4Q9BYR9 128 aa1.45□□□□□ -2.18
CCDC59-204ENST00000550589 KRTAP2-1Q9BYU5 128 aa1.45□□□□□ -2.18
CCDC59-204ENST00000550589 FSIP2Q5CZC0 6907 aa1.42□□□□□ -2.18
CCDC59-204ENST00000550589 MT1MQ8N339 61 aa1.41□□□□□ -2.18
CCDC59-204ENST00000550589 SPRR2FQ96RM1 72 aa1.41□□□□□ -2.18
CCDC59-204ENST00000550589 CRCT1Q9UGL9 99 aa1.37□□□□□ -2.19
CCDC59-204ENST00000550589 FCGBPQ9Y6R7 5405 aaPredicted RBP1.37□□□□□ -2.19
CCDC59-204ENST00000550589 MACF1Q9UPN3 7388 aaKnown RBP1.35□□□□□ -2.19
CCDC59-204ENST00000550589 AHNAK2Q8IVF2 5795 aa1.34□□□□□ -2.2
CCDC59-204ENST00000550589 MUC12Q9UKN1 5478 aa1.33□□□□□ -2.2
CCDC59-204ENST00000550589 DSTQ03001 7570 aaKnown RBP1.31□□□□□ -2.2
CCDC59-204ENST00000550589 MT1AP04731 61 aa1.3□□□□□ -2.2
CCDC59-204ENST00000550589 SPRR2EP22531 72 aa1.3□□□□□ -2.2
CCDC59-204ENST00000550589 SPRR2BP35325 72 aa1.3□□□□□ -2.2
CCDC59-204ENST00000550589 SPRR2AP35326 72 aa1.3□□□□□ -2.2
CCDC59-204ENST00000550589 KRTAP12-4P60329 112 aa1.29□□□□□ -2.2
CCDC59-204ENST00000550589 KRTAP5-7Q6L8G8 165 aa1.28□□□□□ -2.2
CCDC59-204ENST00000550589 SYNE2Q8WXH0 6885 aaKnown RBP1.28□□□□□ -2.2
CCDC59-204ENST00000550589 KRTAP21-2Q3LI59 83 aa1.27□□□□□ -2.21
CCDC59-204ENST00000550589 KRTAP6-3Q3LI67 103 aa1.26□□□□□ -2.21
CCDC59-204ENST00000550589 SPRR2DP22532 72 aa1.25□□□□□ -2.21
CCDC59-204ENST00000550589 KRTAP6-1Q3LI64 71 aa1.25□□□□□ -2.21
CCDC59-204ENST00000550589 MDN1Q9NU22 5596 aa1.24□□□□□ -2.21
CCDC59-204ENST00000550589 SYNE1Q8NF91 8797 aaKnown RBP1.2□□□□□ -2.22
CCDC59-204ENST00000550589 KRTAP20-1Q3LI63 56 aa1.19□□□□□ -2.22
CCDC59-204ENST00000550589 NEBP20929 6669 aa1.16□□□□□ -2.22
CCDC59-204ENST00000550589 KRTAP6-2Q3LI66 62 aa1.14□□□□□ -2.23
CCDC59-204ENST00000550589 MUC5ACP98088 5654 aa1.13□□□□□ -2.23
CCDC59-204ENST00000550589 PRM1P04553 51 aa1.11□□□□□ -2.23
CCDC59-204ENST00000550589 MT4P47944 62 aa1.07□□□□□ -2.24
CCDC59-204ENST00000550589 KRTAP20-2Q3LI61 65 aa1.06□□□□□ -2.24
CCDC59-204ENST00000550589 KRTAP5-10Q6L8G5 202 aa0.95□□□□□ -2.26
CCDC59-204ENST00000550589 KRTAP21-1Q3LI58 79 aa0.7□□□□□ -2.3
CCDC59-204ENST00000550589 PHGR1C9JFL3 82 aa0.68□□□□□ -2.3
CCDC59-204ENST00000550589 MUC16Q8WXI7 14507 aa0.55□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 173.9 ms