RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 KRTAP5-7Q6L8G8 165 aa7.31□□□□□ -1.24
SMARCC2-210ENST00000550519 KRTAP4-7Q9BYR0 210 aa7.3□□□□□ -1.24
SMARCC2-210ENST00000550519 A0A1B0GU69 56 aa7.29□□□□□ -1.24
SMARCC2-210ENST00000550519 KRTAP5-3Q6L8H2 238 aa7.29□□□□□ -1.24
SMARCC2-210ENST00000550519 H7BZZ5 65 aa7.28□□□□□ -1.24
SMARCC2-210ENST00000550519 COX7CP15954 63 aa7.27□□□□□ -1.25
SMARCC2-210ENST00000550519 KRTAP20-2Q3LI61 65 aa7.21□□□□□ -1.26
SMARCC2-210ENST00000550519 KRTAP12-3P60328 96 aa7.2□□□□□ -1.26
SMARCC2-210ENST00000550519 KRTAP5-5Q701N2 237 aaPredicted RBP7.16□□□□□ -1.26
SMARCC2-210ENST00000550519 SPRR5A0A1B0GTR4 108 aa7.13□□□□□ -1.27
SMARCC2-210ENST00000550519 KRTAP12-4P60329 112 aa7.04□□□□□ -1.28
SMARCC2-210ENST00000550519 PRR15LQ9BU68 103 aa6.94□□□□□ -1.3
SMARCC2-210ENST00000550519 SYNE1Q8NF91 8797 aaKnown RBP6.94□□□□□ -1.3
SMARCC2-210ENST00000550519 LOC100996750A0A140TA64 210 aa6.93□□□□□ -1.3
SMARCC2-210ENST00000550519 H3BS24 57 aa6.89□□□□□ -1.31
SMARCC2-210ENST00000550519 LINC01558Q9Y6Z2 57 aa6.83□□□□□ -1.32
SMARCC2-210ENST00000550519 KRTAP25-1Q3LHN0 102 aa6.79□□□□□ -1.32
SMARCC2-210ENST00000550519 KRTAP19-4Q3LI73 84 aa6.79□□□□□ -1.32
SMARCC2-210ENST00000550519 ANAPC13Q9BS18 74 aa6.75□□□□□ -1.33
SMARCC2-210ENST00000550519 UQCR11O14957 56 aa6.73□□□□□ -1.33
SMARCC2-210ENST00000550519 ATP5EP56381 51 aaPredicted RBP6.71□□□□□ -1.34
SMARCC2-210ENST00000550519 CCDC179H3BU77 68 aa6.67□□□□□ -1.34
SMARCC2-210ENST00000550519 KRTAP4-11Q9BYQ6 195 aa6.67□□□□□ -1.34
SMARCC2-210ENST00000550519 KRTAP15-1Q3LI76 137 aa6.61□□□□□ -1.35
SMARCC2-210ENST00000550519 KRTAP5-2Q701N4 177 aa6.61□□□□□ -1.35
SMARCC2-210ENST00000550519 LCE3CQ5T5A8 94 aa6.59□□□□□ -1.35
SMARCC2-210ENST00000550519 KRTAP23-1A1A580 65 aa6.54□□□□□ -1.36
SMARCC2-210ENST00000550519 MT1AP04731 61 aa6.54□□□□□ -1.36
SMARCC2-210ENST00000550519 MIR22HGQ0VDD5 57 aa6.53□□□□□ -1.36
SMARCC2-210ENST00000550519 KRTAP6-1Q3LI64 71 aa6.53□□□□□ -1.36
SMARCC2-210ENST00000550519 K7ERS5 55 aa6.47□□□□□ -1.37
SMARCC2-210ENST00000550519 KRTAP5-8O75690 187 aa6.46□□□□□ -1.38
SMARCC2-210ENST00000550519 TMEM258P61165 79 aa6.38□□□□□ -1.39
SMARCC2-210ENST00000550519 KRTAP9-4Q9BYQ2 154 aa6.36□□□□□ -1.39
SMARCC2-210ENST00000550519 MUC5BQ9HC84 5762 aaPredicted RBP6.35□□□□□ -1.39
SMARCC2-210ENST00000550519 MUC5ACP98088 5654 aa6.35□□□□□ -1.39
SMARCC2-210ENST00000550519 AHNAKQ09666 5890 aaKnown RBP6.34□□□□□ -1.39
SMARCC2-210ENST00000550519 KRTAP6-2Q3LI66 62 aa6.3□□□□□ -1.4
SMARCC2-210ENST00000550519 OBSCNQ5VST9 7968 aa6.29□□□□□ -1.4
SMARCC2-210ENST00000550519 KRTAP4-12Q9BQ66 201 aa6.27□□□□□ -1.41
SMARCC2-210ENST00000550519 KRTAP9-6A8MVA2 160 aa6.26□□□□□ -1.41
SMARCC2-210ENST00000550519 PSPHP1O15172 72 aa6.18□□□□□ -1.42
SMARCC2-210ENST00000550519 KRTAP9-9Q9BYP9 154 aa6.17□□□□□ -1.42
SMARCC2-210ENST00000550519 V9GYY9 64 aa6.12□□□□□ -1.43
SMARCC2-210ENST00000550519 Q1T7F1 81 aa6.1□□□□□ -1.43
SMARCC2-210ENST00000550519 CDC42SE1Q9NRR8 79 aa6.08□□□□□ -1.44
SMARCC2-210ENST00000550519 RPS28P62857 69 aaKnown RBP6.05□□□□□ -1.44
SMARCC2-210ENST00000550519 KRTAP5-1Q6L8H4 278 aa6□□□□□ -1.45
SMARCC2-210ENST00000550519 MT3P25713 68 aa5.99□□□□□ -1.45
SMARCC2-210ENST00000550519 ROMO1P60602 79 aa5.97□□□□□ -1.45
SMARCC2-210ENST00000550519 A6NED7 52 aa5.93□□□□□ -1.46
SMARCC2-210ENST00000550519 LCE1EQ5T753 118 aa5.61□□□□□ -1.51
SMARCC2-210ENST00000550519 PCP4P48539 62 aa5.41□□□□□ -1.54
SMARCC2-210ENST00000550519 KRTAP4-2Q9BYR5 136 aa5.35□□□□□ -1.55
SMARCC2-210ENST00000550519 LCE1BQ5T7P3 118 aa5.28□□□□□ -1.56
SMARCC2-210ENST00000550519 LCE1CQ5T751 118 aa5.21□□□□□ -1.58
SMARCC2-210ENST00000550519 SVIPQ8NHG7 77 aa4.97□□□□□ -1.61
SMARCC2-210ENST00000550519 BRK1Q8WUW1 75 aa4.8□□□□□ -1.64
SMARCC2-210ENST00000550519 KRTAP5-11Q6L8G4 156 aa4.75□□□□□ -1.65
SMARCC2-210ENST00000550519 LCE1FQ5T754 118 aa4.71□□□□□ -1.66
SMARCC2-210ENST00000550519 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.7□□□□□ -1.66
SMARCC2-210ENST00000550519 LCE3DQ9BYE3 92 aa4.67□□□□□ -1.66
SMARCC2-210ENST00000550519 A0A0A0MQY5 61 aa4.53□□□□□ -1.68
SMARCC2-210ENST00000550519 PMAIP1Q13794 54 aa4.47□□□□□ -1.69
SMARCC2-210ENST00000550519 PHGR1C9JFL3 82 aa4.39□□□□□ -1.71
SMARCC2-210ENST00000550519 LCE3EQ5T5B0 92 aa4.33□□□□□ -1.72
SMARCC2-210ENST00000550519 PRAC1Q96KF2 57 aa4.32□□□□□ -1.72
SMARCC2-210ENST00000550519 KRTAP21-2Q3LI59 83 aa4.31□□□□□ -1.72
SMARCC2-210ENST00000550519 PRO0628Q9UI54 55 aa4.22□□□□□ -1.73
SMARCC2-210ENST00000550519 KTN1-AS1Q86SY8 53 aa4.06□□□□□ -1.76
SMARCC2-210ENST00000550519 KRTAP4-4Q9BYR3 166 aa3.98□□□□□ -1.77
SMARCC2-210ENST00000550519 MUC19Q7Z5P9 8384 aa3.9□□□□□ -1.79
SMARCC2-210ENST00000550519 NDUFAF8A1L188 74 aa3.75□□□□□ -1.81
SMARCC2-210ENST00000550519 LUZP6Q538Z0 58 aa3.66□□□□□ -1.82
SMARCC2-210ENST00000550519 KRTAP21-1Q3LI58 79 aa3.35□□□□□ -1.87
SMARCC2-210ENST00000550519 PRM1P04553 51 aa3.03□□□□□ -1.92
SMARCC2-210ENST00000550519 MUC16Q8WXI7 14507 aa2.75□□□□□ -1.97
SMARCC2-210ENST00000550519 INE1O15225 51 aa2.39□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 159.3 ms